RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 DMRTC1Q5HYR2 192 aa6.29□□□□□ -1.4
BEST3-212ENST00000553096 BTNL3Q6UXE8 466 aa6.29□□□□□ -1.4
BEST3-212ENST00000553096 TBC1D26Q86UD7 250 aa6.29□□□□□ -1.4
BEST3-212ENST00000553096 ABHD5Q8WTS1 349 aa6.29□□□□□ -1.4
BEST3-212ENST00000553096 CT55Q8WUE5 264 aa6.29□□□□□ -1.4
BEST3-212ENST00000553096 HIST1H2BLQ99880 126 aa6.29□□□□□ -1.4
BEST3-212ENST00000553096 CABLES2Q9BTV7 478 aa6.29□□□□□ -1.4
BEST3-212ENST00000553096 SRXN1Q9BYN0 137 aa6.29□□□□□ -1.4
BEST3-212ENST00000553096 ACTR3CQ9C0K3 210 aaPredicted RBP6.29□□□□□ -1.4
BEST3-212ENST00000553096 SRD5A3Q9H8P0 318 aa6.29□□□□□ -1.4
BEST3-212ENST00000553096 CDH20Q9HBT6 801 aa6.29□□□□□ -1.4
BEST3-212ENST00000553096 ST3GAL6Q9Y274 331 aa6.29□□□□□ -1.4
BEST3-212ENST00000553096 LOXL2Q9Y4K0 774 aa6.29□□□□□ -1.4
BEST3-212ENST00000553096 RTTNQ86VV8 2226 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 LOC400499M0QZD8 3231 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 A0A1B0GW15 77 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 NRASP01111 189 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 GCGP01275 180 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 CRYGSP22914 178 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 SELENOTP62341 195 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 HERV-K104P63124 156 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 PDZD11Q5EBL8 140 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 NMSQ5H8A3 153 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 SPIN3Q5JUX0 258 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 FAM27BQ5VT28 67 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 FAM90A2PQ658T7 463 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 TMEM42Q69YG0 159 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 ZNF774Q6NX45 483 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 C6orf15Q6UXA7 325 aaPredicted RBP6.28□□□□□ -1.4
BEST3-212ENST00000553096 TGIF2LYQ8IUE0 185 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 OR2D3Q8NGH3 330 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 OR5D13Q8NGL4 314 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 SCGB1C1Q8TD33 95 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 MBD3L1Q8WWY6 194 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 RAB40CQ96S21 281 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 PSMG3Q9BT73 122 aaPredicted RBP6.28□□□□□ -1.4
BEST3-212ENST00000553096 SPRY4Q9C004 299 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 ZNF442Q9H7R0 627 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 SDF2L1Q9HCN8 221 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 LRFN1Q9P244 771 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 GNG13Q9P2W3 67 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 LRRC3CA6NJW4 275 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 GLI4P10075 376 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 NTF4P34130 210 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 NPBWR2P48146 333 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 RBM11P57052 281 aaKnown RBP6.28□□□□□ -1.4
BEST3-212ENST00000553096 OR5I1Q13606 314 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 PMS2P11Q13670 270 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 RSPO1Q2MKA7 263 aaPredicted RBP6.28□□□□□ -1.4
BEST3-212ENST00000553096 COA6Q5JTJ3 125 aaKnown RBP6.28□□□□□ -1.4
BEST3-212ENST00000553096 PLA2G2CQ5R387 149 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 GFI1BQ5VTD9 330 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 ZNF787Q6DD87 383 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 RPS19BP1Q86WX3 136 aaKnown RBP6.28□□□□□ -1.4
BEST3-212ENST00000553096 ACY3Q96HD9 319 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 AGMATQ9BSE5 352 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 ULBP2Q9BZM5 246 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 CALHM2Q9HA72 323 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 P4HTMQ9NXG6 502 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 FOXJ2Q9P0K8 574 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 VAX2Q9UIW0 290 aa6.28□□□□□ -1.4
BEST3-212ENST00000553096 RBM7Q9Y580 266 aaKnown RBP6.28□□□□□ -1.4
BEST3-212ENST00000553096 A0A0J9YW62 118 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 KIR2DS1A0A191URI9 304 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 C20orf202A1L168 122 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 LRP5LA4QPB2 252 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 PINLYPA6NC86 204 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 C9orf172C9J069 976 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 H0Y980 276 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 TNFSF11O14788 317 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 CST7O76096 145 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 RFPL3SP0C7P2 107 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 CCL2P13500 99 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 SELEP16581 610 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 GNRHRP30968 328 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 OTX2P32243 289 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 ID1P41134 155 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 KIR2DS4P43632 304 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 DSCR4P56555 118 aaPredicted RBP6.27□□□□□ -1.41
BEST3-212ENST00000553096 KLF3P57682 345 aaPredicted RBP6.27□□□□□ -1.41
BEST3-212ENST00000553096 SERF2P84101 59 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 KIR2DS1Q14954 304 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 RSPO4Q2I0M5 234 aaPredicted RBP6.27□□□□□ -1.41
BEST3-212ENST00000553096 SNAI3Q3KNW1 292 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 PIGYQ3MUY2 71 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 SLC25A26Q70HW3 274 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 MRGPRGQ86SM5 289 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 TMEM123Q8N131 208 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 ZIC4Q8N9L1 334 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 PINX1Q96BK5 328 aaKnown RBP6.27□□□□□ -1.41
BEST3-212ENST00000553096 ZNF837Q96EG3 531 aaPredicted RBP6.27□□□□□ -1.41
BEST3-212ENST00000553096 LOXL4Q96JB6 756 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 SIGLEC12Q96PQ1 595 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 PCGF1Q9BSM1 259 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 RBM24Q9BX46 236 aaKnown RBP6.27□□□□□ -1.41
BEST3-212ENST00000553096 DEPPQ9NTK1 212 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 LAMA5O15230 3695 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 IGKV1-27A0A075B6S5 117 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 CST2P09228 141 aa6.27□□□□□ -1.41
BEST3-212ENST00000553096 ATP5J2P56134 94 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms