RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 ZNF230Q9UIE0 474 aaPredicted RBP9.38□□□□□ -0.91
TRAFD1-209ENST00000552896 TET2Q6N021 2002 aaPredicted RBP9.38□□□□□ -0.91
TRAFD1-209ENST00000552896 TRBV6-7A0A0A0MS04 114 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 RAB29O14966 203 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 ST8SIA5O15466 376 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 SSX5O60225 188 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 CD24P25063 80 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 CEACAM6P40199 344 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 LSAMPQ13449 338 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 EBI3Q14213 229 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 SPCS2Q15005 226 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 FBLN7Q53RD9 439 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 IGSF11Q5DX21 431 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 TMEM69Q5SWH9 247 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 MZT2AQ6P582 158 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 C11orf88Q6PI97 169 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 MOB3BQ86TA1 216 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 OR10J5Q8NHC4 309 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 CAPSLQ8WWF8 208 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 AGMATQ9BSE5 352 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 ZNF747Q9BV97 191 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 AUNIPQ9H7T9 357 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 ZNF702PQ9H963 129 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 CCDC59Q9P031 241 aaKnown RBP9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 PIPOXQ9P0Z9 390 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 MOB4Q9Y3A3 225 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 RNF114Q9Y508 228 aa9.37□□□□□ -0.91
TRAFD1-209ENST00000552896 IGKV1D-8A0A087WSZ0 117 aa9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 BET1O15155 118 aa9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 IGKV1D-33P01593 117 aa9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 IGKV1-33P01594 117 aa9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 EIF4EP06730 217 aaKnown RBP9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 GSTT2P0CG29 244 aa9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 GSTT2BP0CG30 244 aa9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 ZNF182P17025 639 aaPredicted RBP9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 TMEM11P17152 192 aa9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 CD1BP29016 333 aa9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 SOX6P35712 828 aa9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 CBX5P45973 191 aa9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 PROK1P58294 105 aa9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 HES1Q14469 280 aa9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 OR2T6Q8NHC8 308 aa9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 ISOC1Q96CN7 298 aa9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 S1PR3Q99500 378 aa9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 GINS4Q9BRT9 223 aa9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 MRPL20Q9BYC9 149 aaKnown RBP9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 PRSS22Q9GZN4 317 aa9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 C11orf54Q9H0W9 315 aaPredicted RBP9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 RDH8Q9NYR8 311 aa9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 COMMD3Q9UBI1 195 aa9.36□□□□□ -0.91
TRAFD1-209ENST00000552896 IGHV3-72A0A0B4J1Y9 119 aa9.35□□□□□ -0.91
TRAFD1-209ENST00000552896 H3BMQ9 156 aa9.35□□□□□ -0.91
TRAFD1-209ENST00000552896 FGF16O43320 207 aa9.35□□□□□ -0.91
TRAFD1-209ENST00000552896 CTXN2P0C2S0 81 aa9.35□□□□□ -0.91
TRAFD1-209ENST00000552896 OR3A3P47888 321 aa9.35□□□□□ -0.91
TRAFD1-209ENST00000552896 TAS2R20P59543 309 aa9.35□□□□□ -0.91
TRAFD1-209ENST00000552896 CNIH2Q6PI25 160 aa9.35□□□□□ -0.91
TRAFD1-209ENST00000552896 SHISA2Q6UWI4 295 aa9.35□□□□□ -0.91
TRAFD1-209ENST00000552896 H1FOOQ8IZA3 346 aaPredicted RBP9.35□□□□□ -0.91
TRAFD1-209ENST00000552896 Q8N6K4 173 aa9.35□□□□□ -0.91
TRAFD1-209ENST00000552896 OR2T10Q8NGZ9 312 aa9.35□□□□□ -0.91
TRAFD1-209ENST00000552896 NABP2Q9BQ15 211 aa9.35□□□□□ -0.91
TRAFD1-209ENST00000552896 ZNF251Q9BRH9 671 aa9.35□□□□□ -0.91
TRAFD1-209ENST00000552896 ST6GALNAC5Q9BVH7 336 aa9.35□□□□□ -0.91
TRAFD1-209ENST00000552896 ANXA10Q9UJ72 324 aa9.35□□□□□ -0.91
TRAFD1-209ENST00000552896 OR5H14A6NHG9 310 aa9.34□□□□□ -0.91
TRAFD1-209ENST00000552896 HPGDSO60760 199 aa9.34□□□□□ -0.91
TRAFD1-209ENST00000552896 MOSP00540 346 aa9.34□□□□□ -0.91
TRAFD1-209ENST00000552896 ELK1P19419 428 aa9.34□□□□□ -0.91
TRAFD1-209ENST00000552896 GPR12P47775 334 aa9.34□□□□□ -0.91
TRAFD1-209ENST00000552896 RPL39P5Q59GN2 51 aa9.34□□□□□ -0.91
TRAFD1-209ENST00000552896 HOGA1Q86XE5 327 aa9.34□□□□□ -0.91
TRAFD1-209ENST00000552896 BEST4Q8NFU0 473 aa9.34□□□□□ -0.91
TRAFD1-209ENST00000552896 OR8H1Q8NGG4 311 aa9.34□□□□□ -0.91
TRAFD1-209ENST00000552896 DYNC2LI1Q8TCX1 351 aa9.34□□□□□ -0.91
TRAFD1-209ENST00000552896 ABHD14BQ96IU4 210 aa9.34□□□□□ -0.91
TRAFD1-209ENST00000552896 EAF1Q96JC9 268 aaPredicted RBP9.34□□□□□ -0.91
TRAFD1-209ENST00000552896 OR2D2Q9H210 308 aa9.34□□□□□ -0.91
TRAFD1-209ENST00000552896 IFT46Q9NQC8 304 aa9.34□□□□□ -0.91
TRAFD1-209ENST00000552896 ZNF221Q9UK13 617 aa9.34□□□□□ -0.91
TRAFD1-209ENST00000552896 ADAM30Q9UKF2 790 aa9.34□□□□□ -0.91
TRAFD1-209ENST00000552896 ANAPC10Q9UM13 185 aa9.34□□□□□ -0.91
TRAFD1-209ENST00000552896 SMIM31A0A1B0GVY4 71 aa9.33□□□□□ -0.92
TRAFD1-209ENST00000552896 AMY1AP04745 511 aa9.33□□□□□ -0.92
TRAFD1-209ENST00000552896 AMY2AP04746 511 aa9.33□□□□□ -0.92
TRAFD1-209ENST00000552896 PTHLHP12272 177 aa9.33□□□□□ -0.92
TRAFD1-209ENST00000552896 ARPC4P59998 168 aa9.33□□□□□ -0.92
TRAFD1-209ENST00000552896 GVQW1Q8N7I0 195 aa9.33□□□□□ -0.92
TRAFD1-209ENST00000552896 C5orf56Q8N8D9 126 aa9.33□□□□□ -0.92
TRAFD1-209ENST00000552896 SNAPC3Q92966 411 aa9.33□□□□□ -0.92
TRAFD1-209ENST00000552896 RBM38Q9H0Z9 239 aaKnown RBP9.33□□□□□ -0.92
TRAFD1-209ENST00000552896 SERTAD4Q9NUC0 356 aa9.33□□□□□ -0.92
TRAFD1-209ENST00000552896 SIGLEC9Q9Y336 463 aa9.33□□□□□ -0.92
TRAFD1-209ENST00000552896 CEPT1Q9Y6K0 416 aa9.33□□□□□ -0.92
TRAFD1-209ENST00000552896 FAM25AB3EWG3 89 aa9.32□□□□□ -0.92
TRAFD1-209ENST00000552896 FAM25CB3EWG5 89 aa9.32□□□□□ -0.92
TRAFD1-209ENST00000552896 FAM25GB3EWG6 89 aa9.32□□□□□ -0.92
TRAFD1-209ENST00000552896 ZNF736B4DX44 427 aaPredicted RBP9.32□□□□□ -0.92
TRAFD1-209ENST00000552896 ZNF701M0R085 212 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms