RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 CAPGP40121 348 aa8.93□□□□□ -0.98
PTCH1-222ENST00000551425 CCR9P51686 369 aa8.93□□□□□ -0.98
PTCH1-222ENST00000551425 AQP4P55087 323 aa8.93□□□□□ -0.98
PTCH1-222ENST00000551425 RBM11P57052 281 aaKnown RBP8.93□□□□□ -0.98
PTCH1-222ENST00000551425 NANOS3P60323 173 aaKnown RBP8.93□□□□□ -0.98
PTCH1-222ENST00000551425 ADARB1P78563 741 aaKnown RBP8.93□□□□□ -0.98
PTCH1-222ENST00000551425 RPEL1Q2QD12 228 aa8.93□□□□□ -0.98
PTCH1-222ENST00000551425 DEFB114Q30KQ6 69 aa8.93□□□□□ -0.98
PTCH1-222ENST00000551425 TP53I3Q53FA7 332 aa8.93□□□□□ -0.98
PTCH1-222ENST00000551425 C6orf183Q5T699 404 aa8.93□□□□□ -0.98
PTCH1-222ENST00000551425 IZUMO2Q6UXV1 221 aa8.93□□□□□ -0.98
PTCH1-222ENST00000551425 LINC00596Q86U02 117 aa8.93□□□□□ -0.98
PTCH1-222ENST00000551425 SETD9Q8NE22 299 aa8.93□□□□□ -0.98
PTCH1-222ENST00000551425 OR5D14Q8NGL3 314 aa8.93□□□□□ -0.98
PTCH1-222ENST00000551425 OR1L1Q8NH94 360 aa8.93□□□□□ -0.98
PTCH1-222ENST00000551425 TNFAIP8L1Q8WVP5 186 aa8.93□□□□□ -0.98
PTCH1-222ENST00000551425 IL4I1Q96RQ9 567 aa8.93□□□□□ -0.98
PTCH1-222ENST00000551425 ABHD14AQ9BUJ0 271 aa8.93□□□□□ -0.98
PTCH1-222ENST00000551425 ZNF355PQ9NSJ1 428 aa8.93□□□□□ -0.98
PTCH1-222ENST00000551425 RCC2Q9P258 522 aaKnown RBP8.93□□□□□ -0.98
PTCH1-222ENST00000551425 DNAH6Q9C0G6 4158 aa8.92□□□□□ -0.98
PTCH1-222ENST00000551425 GEMIN2O14893 280 aaKnown RBP8.92□□□□□ -0.98
PTCH1-222ENST00000551425 HTR3BO95264 441 aa8.92□□□□□ -0.98
PTCH1-222ENST00000551425 FADS2O95864 444 aaKnown RBP8.92□□□□□ -0.98
PTCH1-222ENST00000551425 SNRPGP62308 76 aaKnown RBP8.92□□□□□ -0.98
PTCH1-222ENST00000551425 ZNF85Q03923 595 aa8.92□□□□□ -0.98
PTCH1-222ENST00000551425 MPV17LQ2QL34 196 aa8.92□□□□□ -0.98
PTCH1-222ENST00000551425 SYT6Q5T7P8 510 aaPredicted RBP8.92□□□□□ -0.98
PTCH1-222ENST00000551425 MEDAGQ5VYS4 303 aa8.92□□□□□ -0.98
PTCH1-222ENST00000551425 FAM131AQ6UXB0 335 aa8.92□□□□□ -0.98
PTCH1-222ENST00000551425 Q6ZWC4 215 aa8.92□□□□□ -0.98
PTCH1-222ENST00000551425 SLC16A13Q7RTY0 426 aa8.92□□□□□ -0.98
PTCH1-222ENST00000551425 SERPINA12Q8IW75 414 aa8.92□□□□□ -0.98
PTCH1-222ENST00000551425 PRR18Q8N4B5 295 aa8.92□□□□□ -0.98
PTCH1-222ENST00000551425 STX19Q8N4C7 294 aa8.92□□□□□ -0.98
PTCH1-222ENST00000551425 PARP16Q8N5Y8 322 aa8.92□□□□□ -0.98
PTCH1-222ENST00000551425 TMEM217Q8N7C4 229 aa8.92□□□□□ -0.98
PTCH1-222ENST00000551425 OR52N1Q8NH53 320 aa8.92□□□□□ -0.98
PTCH1-222ENST00000551425 Q96MT0 163 aa8.92□□□□□ -0.98
PTCH1-222ENST00000551425 OR2S2Q9NQN1 319 aa8.92□□□□□ -0.98
PTCH1-222ENST00000551425 IL36GQ9NZH8 169 aa8.92□□□□□ -0.98
PTCH1-222ENST00000551425 TRAPPC2LQ9UL33 140 aa8.92□□□□□ -0.98
PTCH1-222ENST00000551425 SAA2-SAA4A0A096LPE2 208 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 SNTNA6NMZ2 147 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 OR4C45A6NMZ5 311 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 SPRY2O43597 315 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 CA2P00918 260 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 SAA2P0DJI9 122 aaPredicted RBP8.91□□□□□ -0.98
PTCH1-222ENST00000551425 OR3A3P47888 321 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 GNMTQ14749 295 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 GUCA2BQ16661 112 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 LY6G6FQ5SQ64 297 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 SLC25A30Q5SVS4 291 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 ATAD3CQ5T2N8 411 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 FAM71F2Q6NXP2 309 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 TRAT1Q6PIZ9 186 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 KCTD20Q7Z5Y7 419 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 C8orf59Q8N0T1 100 aaPredicted RBP8.91□□□□□ -0.98
PTCH1-222ENST00000551425 GAPTQ8N292 157 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 BVESQ8NE79 360 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 OR5T1Q8NG75 326 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 RHOXF1Q8NHV9 184 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 NEK7Q8TDX7 302 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 DYNLRB2Q8TF09 96 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 SNAPC3Q92966 411 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 RFKQ969G6 155 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 USMG5Q96IX5 58 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 GPER1Q99527 375 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 ZNF184Q99676 751 aaPredicted RBP8.91□□□□□ -0.98
PTCH1-222ENST00000551425 RNF5Q99942 180 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 RAB26Q9ULW5 256 aa8.91□□□□□ -0.98
PTCH1-222ENST00000551425 OR5H14A6NHG9 310 aa8.9□□□□□ -0.98
PTCH1-222ENST00000551425 SLC22A1O15245 554 aa8.9□□□□□ -0.98
PTCH1-222ENST00000551425 RBBP9O75884 186 aa8.9□□□□□ -0.98
PTCH1-222ENST00000551425 KIR2DS2P43631 304 aa8.9□□□□□ -0.98
PTCH1-222ENST00000551425 TMED1Q13445 227 aa8.9□□□□□ -0.98
PTCH1-222ENST00000551425 ZNF529Q6P280 563 aa8.9□□□□□ -0.98
PTCH1-222ENST00000551425 OR52L2PQ8NGH6 319 aa8.9□□□□□ -0.98
PTCH1-222ENST00000551425 OR4K15Q8NH41 348 aa8.9□□□□□ -0.98
PTCH1-222ENST00000551425 GHSRQ92847 366 aa8.9□□□□□ -0.98
PTCH1-222ENST00000551425 MRPS24Q96EL2 167 aaKnown RBP8.9□□□□□ -0.98
PTCH1-222ENST00000551425 WDR89Q96FK6 387 aaPredicted RBP8.9□□□□□ -0.98
PTCH1-222ENST00000551425 CLCC1Q96S66 551 aa8.9□□□□□ -0.98
PTCH1-222ENST00000551425 TINAGL1Q9GZM7 467 aaPredicted RBP8.9□□□□□ -0.98
PTCH1-222ENST00000551425 FAM192AQ9GZU8 254 aa8.9□□□□□ -0.98
PTCH1-222ENST00000551425 Q9H521 79 aa8.9□□□□□ -0.98
PTCH1-222ENST00000551425 TECRQ9NZ01 308 aaKnown RBP8.9□□□□□ -0.98
PTCH1-222ENST00000551425 METTL1Q9UBP6 276 aaKnown RBP8.9□□□□□ -0.98
PTCH1-222ENST00000551425 JPT1Q9UK76 154 aa8.9□□□□□ -0.98
PTCH1-222ENST00000551425 FAT2Q9NYQ8 4349 aa8.89□□□□□ -0.99
PTCH1-222ENST00000551425 A0A0B4J203 849 aa8.89□□□□□ -0.99
PTCH1-222ENST00000551425 YPEL1O60688 119 aa8.89□□□□□ -0.99
PTCH1-222ENST00000551425 CDRT1O95170 752 aa8.89□□□□□ -0.99
PTCH1-222ENST00000551425 HTR1AP08908 422 aa8.89□□□□□ -0.99
PTCH1-222ENST00000551425 GSTP1P09211 210 aaKnown RBP8.89□□□□□ -0.99
PTCH1-222ENST00000551425 GABRB1P18505 474 aa8.89□□□□□ -0.99
PTCH1-222ENST00000551425 RCC1P18754 421 aaPredicted RBP8.89□□□□□ -0.99
PTCH1-222ENST00000551425 RAB3AP20336 220 aa8.89□□□□□ -0.99
PTCH1-222ENST00000551425 MC5RP33032 325 aa8.89□□□□□ -0.99
PTCH1-222ENST00000551425 ATP6V1E1P36543 226 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms