RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 MOSP00540 346 aa12.26□□□□□ -0.45
PRPF40B-211ENST00000551063 TGFBR1P36897 503 aa12.26□□□□□ -0.45
PRPF40B-211ENST00000551063 CEACAM6P40199 344 aa12.26□□□□□ -0.45
PRPF40B-211ENST00000551063 PITPNAQ00169 270 aa12.26□□□□□ -0.45
PRPF40B-211ENST00000551063 HNF4GQ14541 408 aa12.26□□□□□ -0.45
PRPF40B-211ENST00000551063 PNLIPRP3Q17RR3 467 aa12.26□□□□□ -0.45
PRPF40B-211ENST00000551063 CDNFQ49AH0 187 aa12.26□□□□□ -0.45
PRPF40B-211ENST00000551063 HACD4Q5VWC8 232 aa12.26□□□□□ -0.45
PRPF40B-211ENST00000551063 OR5H6Q8NGV6 325 aa12.26□□□□□ -0.45
PRPF40B-211ENST00000551063 PHF21AQ96BD5 680 aa12.26□□□□□ -0.45
PRPF40B-211ENST00000551063 SLC25A38Q96DW6 304 aa12.26□□□□□ -0.45
PRPF40B-211ENST00000551063 S1PR3Q99500 378 aa12.26□□□□□ -0.45
PRPF40B-211ENST00000551063 NABP2Q9BQ15 211 aa12.26□□□□□ -0.45
PRPF40B-211ENST00000551063 AGMATQ9BSE5 352 aa12.26□□□□□ -0.45
PRPF40B-211ENST00000551063 MRPL20Q9BYC9 149 aaKnown RBP12.26□□□□□ -0.45
PRPF40B-211ENST00000551063 MRPS26Q9BYN8 205 aaKnown RBP12.26□□□□□ -0.45
PRPF40B-211ENST00000551063 PARP12Q9H0J9 701 aaKnown RBP12.26□□□□□ -0.45
PRPF40B-211ENST00000551063 C11orf54Q9H0W9 315 aaPredicted RBP12.26□□□□□ -0.45
PRPF40B-211ENST00000551063 SPATA2Q9UM82 520 aa12.26□□□□□ -0.45
PRPF40B-211ENST00000551063 TRBV6-7A0A0A0MS04 114 aa12.25□□□□□ -0.45
PRPF40B-211ENST00000551063 ZNF736B4DX44 427 aaPredicted RBP12.25□□□□□ -0.45
PRPF40B-211ENST00000551063 KCNAB3O43448 404 aa12.25□□□□□ -0.45
PRPF40B-211ENST00000551063 FBXO24O75426 580 aa12.25□□□□□ -0.45
PRPF40B-211ENST00000551063 RPS19P39019 145 aaKnown RBP12.25□□□□□ -0.45
PRPF40B-211ENST00000551063 OR3A3P47888 321 aa12.25□□□□□ -0.45
PRPF40B-211ENST00000551063 LSM3P62310 102 aaKnown RBP12.25□□□□□ -0.45
PRPF40B-211ENST00000551063 C2orf68Q2NKX9 166 aa12.25□□□□□ -0.45
PRPF40B-211ENST00000551063 ZNF260Q3ZCT1 412 aa12.25□□□□□ -0.45
PRPF40B-211ENST00000551063 ZNF251Q9BRH9 671 aa12.25□□□□□ -0.45
PRPF40B-211ENST00000551063 DCSTAMPQ9H295 470 aa12.25□□□□□ -0.45
PRPF40B-211ENST00000551063 LIN7CQ9NUP9 197 aaKnown RBP12.25□□□□□ -0.45
PRPF40B-211ENST00000551063 RDH8Q9NYR8 311 aa12.25□□□□□ -0.45
PRPF40B-211ENST00000551063 SH2D7A6NKC9 451 aaPredicted RBP12.24□□□□□ -0.45
PRPF40B-211ENST00000551063 GSTT2P0CG29 244 aa12.24□□□□□ -0.45
PRPF40B-211ENST00000551063 GSTT2BP0CG30 244 aa12.24□□□□□ -0.45
PRPF40B-211ENST00000551063 GNG2P59768 71 aa12.24□□□□□ -0.45
PRPF40B-211ENST00000551063 NCS1P62166 190 aa12.24□□□□□ -0.45
PRPF40B-211ENST00000551063 C9orf152Q5JTZ5 239 aa12.24□□□□□ -0.45
PRPF40B-211ENST00000551063 MAFIPQ8WZ33 124 aa12.24□□□□□ -0.45
PRPF40B-211ENST00000551063 SLC25A46Q96AG3 418 aa12.24□□□□□ -0.45
PRPF40B-211ENST00000551063 KCTD12Q96CX2 325 aaKnown RBP12.24□□□□□ -0.45
PRPF40B-211ENST00000551063 ZNF230Q9UIE0 474 aaPredicted RBP12.24□□□□□ -0.45
PRPF40B-211ENST00000551063 TMEM235A6NFC5 223 aa12.23□□□□□ -0.45
PRPF40B-211ENST00000551063 OR5H14A6NHG9 310 aa12.23□□□□□ -0.45
PRPF40B-211ENST00000551063 NCBP2LA6PVI3 153 aaKnown RBP12.23□□□□□ -0.45
PRPF40B-211ENST00000551063 BET1O15155 118 aa12.23□□□□□ -0.45
PRPF40B-211ENST00000551063 GABARAPO95166 117 aa12.23□□□□□ -0.45
PRPF40B-211ENST00000551063 IGHG2P01859 326 aa12.23□□□□□ -0.45
PRPF40B-211ENST00000551063 RPL39P5Q59GN2 51 aa12.23□□□□□ -0.45
PRPF40B-211ENST00000551063 IGSF11Q5DX21 431 aa12.23□□□□□ -0.45
PRPF40B-211ENST00000551063 C11orf44Q8N8P7 122 aa12.23□□□□□ -0.45
PRPF40B-211ENST00000551063 Q8N9W7 124 aa12.23□□□□□ -0.45
PRPF40B-211ENST00000551063 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.23□□□□□ -0.45
PRPF40B-211ENST00000551063 OR10J5Q8NHC4 309 aa12.23□□□□□ -0.45
PRPF40B-211ENST00000551063 NUDCD2Q8WVJ2 157 aa12.23□□□□□ -0.45
PRPF40B-211ENST00000551063 ABHD14BQ96IU4 210 aa12.23□□□□□ -0.45
PRPF40B-211ENST00000551063 ABCG5Q9H222 651 aa12.23□□□□□ -0.45
PRPF40B-211ENST00000551063 MMP27Q9H306 513 aa12.23□□□□□ -0.45
PRPF40B-211ENST00000551063 DIABLOQ9NR28 239 aa12.23□□□□□ -0.45
PRPF40B-211ENST00000551063 ELF5Q9UKW6 265 aaPredicted RBP12.23□□□□□ -0.45
PRPF40B-211ENST00000551063 WNK1Q9H4A3 2382 aa12.23□□□□□ -0.45
PRPF40B-211ENST00000551063 MEGF8Q7Z7M0 2845 aa12.22□□□□□ -0.45
PRPF40B-211ENST00000551063 IGKV1D-8A0A087WSZ0 117 aa12.22□□□□□ -0.45
PRPF40B-211ENST00000551063 CTXN2P0C2S0 81 aa12.22□□□□□ -0.45
PRPF40B-211ENST00000551063 GPR12P47775 334 aa12.22□□□□□ -0.45
PRPF40B-211ENST00000551063 UBE2NLQ5JXB2 153 aa12.22□□□□□ -0.45
PRPF40B-211ENST00000551063 ANKRD13BQ86YJ7 626 aa12.22□□□□□ -0.45
PRPF40B-211ENST00000551063 FAM71E2Q8N5Q1 922 aa12.22□□□□□ -0.45
PRPF40B-211ENST00000551063 PLSCR3Q9NRY6 295 aa12.22□□□□□ -0.45
PRPF40B-211ENST00000551063 ZNF221Q9UK13 617 aa12.22□□□□□ -0.45
PRPF40B-211ENST00000551063 TRAV18A0A075B6X5 111 aa12.21□□□□□ -0.45
PRPF40B-211ENST00000551063 SSX5O60225 188 aa12.21□□□□□ -0.45
PRPF40B-211ENST00000551063 CSF1P09603 554 aa12.21□□□□□ -0.45
PRPF40B-211ENST00000551063 CT45A6P0DMU7 189 aa12.21□□□□□ -0.45
PRPF40B-211ENST00000551063 CT45A5P0DMU8 189 aa12.21□□□□□ -0.45
PRPF40B-211ENST00000551063 CT45A7P0DMV0 189 aa12.21□□□□□ -0.45
PRPF40B-211ENST00000551063 CD28P10747 220 aa12.21□□□□□ -0.45
PRPF40B-211ENST00000551063 ALDH3B2P48448 385 aa12.21□□□□□ -0.45
PRPF40B-211ENST00000551063 ACTBP60709 375 aa12.21□□□□□ -0.45
PRPF40B-211ENST00000551063 VBP1P61758 197 aa12.21□□□□□ -0.45
PRPF40B-211ENST00000551063 DEFA6Q01524 100 aa12.21□□□□□ -0.45
PRPF40B-211ENST00000551063 MMDQ15546 238 aa12.21□□□□□ -0.45
PRPF40B-211ENST00000551063 SLC35E3Q7Z769 313 aa12.21□□□□□ -0.45
PRPF40B-211ENST00000551063 FOXRED2Q8IWF2 684 aa12.21□□□□□ -0.45
PRPF40B-211ENST00000551063 OR5AU1Q8NGC0 362 aa12.21□□□□□ -0.45
PRPF40B-211ENST00000551063 OR4X2Q8NGF9 303 aa12.21□□□□□ -0.45
PRPF40B-211ENST00000551063 OR5AN1Q8NGI8 311 aa12.21□□□□□ -0.45
PRPF40B-211ENST00000551063 RASL11BQ9BPW5 248 aa12.21□□□□□ -0.45
PRPF40B-211ENST00000551063 GINS4Q9BRT9 223 aa12.21□□□□□ -0.45
PRPF40B-211ENST00000551063 GAB2Q9UQC2 676 aa12.21□□□□□ -0.45
PRPF40B-211ENST00000551063 PKD1L1Q8TDX9 2849 aa12.21□□□□□ -0.46
PRPF40B-211ENST00000551063 H0YJW9 148 aa12.2□□□□□ -0.46
PRPF40B-211ENST00000551063 RBBP9O75884 186 aa12.2□□□□□ -0.46
PRPF40B-211ENST00000551063 MC5RP33032 325 aa12.2□□□□□ -0.46
PRPF40B-211ENST00000551063 CTF1Q16619 201 aa12.2□□□□□ -0.46
PRPF40B-211ENST00000551063 PDLIM3Q53GG5 364 aaPredicted RBP12.2□□□□□ -0.46
PRPF40B-211ENST00000551063 FAM131AQ6UXB0 335 aa12.2□□□□□ -0.46
PRPF40B-211ENST00000551063 CENPVQ7Z7K6 275 aaPredicted RBP12.2□□□□□ -0.46
PRPF40B-211ENST00000551063 NDUFA11Q86Y39 141 aa12.2□□□□□ -0.46
PRPF40B-211ENST00000551063 H1FOOQ8IZA3 346 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms