RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 LSAMPQ13449 338 aa14.89□□□□□ -0.03
PRPF40B-206ENST00000547764 ZNF260Q3ZCT1 412 aa14.89□□□□□ -0.03
PRPF40B-206ENST00000547764 IGSF11Q5DX21 431 aa14.89□□□□□ -0.03
PRPF40B-206ENST00000547764 C5orf56Q8N8D9 126 aa14.89□□□□□ -0.03
PRPF40B-206ENST00000547764 C11orf44Q8N8P7 122 aa14.89□□□□□ -0.03
PRPF40B-206ENST00000547764 WIPF2Q8TF74 440 aaPredicted RBP14.89□□□□□ -0.03
PRPF40B-206ENST00000547764 EDARADDQ8WWZ3 215 aa14.89□□□□□ -0.03
PRPF40B-206ENST00000547764 ABHD14BQ96IU4 210 aa14.89□□□□□ -0.03
PRPF40B-206ENST00000547764 NABP2Q9BQ15 211 aa14.89□□□□□ -0.03
PRPF40B-206ENST00000547764 MRPL20Q9BYC9 149 aaKnown RBP14.89□□□□□ -0.03
PRPF40B-206ENST00000547764 MRPS26Q9BYN8 205 aaKnown RBP14.89□□□□□ -0.03
PRPF40B-206ENST00000547764 PIPOXQ9P0Z9 390 aa14.89□□□□□ -0.03
PRPF40B-206ENST00000547764 IGKV1D-8A0A087WSZ0 117 aa14.88□□□□□ -0.03
PRPF40B-206ENST00000547764 TMEM235A6NFC5 223 aa14.88□□□□□ -0.03
PRPF40B-206ENST00000547764 RAB29O14966 203 aa14.88□□□□□ -0.03
PRPF40B-206ENST00000547764 BET1O15155 118 aa14.88□□□□□ -0.03
PRPF40B-206ENST00000547764 DTYMKP23919 212 aa14.88□□□□□ -0.03
PRPF40B-206ENST00000547764 SERPINB10P48595 397 aa14.88□□□□□ -0.03
PRPF40B-206ENST00000547764 VBP1P61758 197 aa14.88□□□□□ -0.03
PRPF40B-206ENST00000547764 SRSF7Q16629 238 aaKnown RBP eCLIP14.88□□□□□ -0.03
PRPF40B-206ENST00000547764 RPL39P5Q59GN2 51 aa14.88□□□□□ -0.03
PRPF40B-206ENST00000547764 C9orf152Q5JTZ5 239 aa14.88□□□□□ -0.03
PRPF40B-206ENST00000547764 HIST2H2BDQ6DRA6 164 aa14.88□□□□□ -0.03
PRPF40B-206ENST00000547764 Q6ZS49 121 aa14.88□□□□□ -0.03
PRPF40B-206ENST00000547764 NUDCD2Q8WVJ2 157 aa14.88□□□□□ -0.03
PRPF40B-206ENST00000547764 PHF21AQ96BD5 680 aa14.88□□□□□ -0.03
PRPF40B-206ENST00000547764 ZNF251Q9BRH9 671 aa14.88□□□□□ -0.03
PRPF40B-206ENST00000547764 CABLES2Q9BTV7 478 aa14.88□□□□□ -0.03
PRPF40B-206ENST00000547764 RDH8Q9NYR8 311 aa14.88□□□□□ -0.03
PRPF40B-206ENST00000547764 TRBV6-7A0A0A0MS04 114 aa14.87□□□□□ -0.03
PRPF40B-206ENST00000547764 NCBP2LA6PVI3 153 aaKnown RBP14.87□□□□□ -0.03
PRPF40B-206ENST00000547764 PNLIPRP3Q17RR3 467 aa14.87□□□□□ -0.03
PRPF40B-206ENST00000547764 FAM71F2Q6NXP2 309 aa14.87□□□□□ -0.03
PRPF40B-206ENST00000547764 SLC25A46Q96AG3 418 aa14.87□□□□□ -0.03
PRPF40B-206ENST00000547764 S1PR3Q99500 378 aa14.87□□□□□ -0.03
PRPF40B-206ENST00000547764 ST6GALNAC5Q9BVH7 336 aa14.87□□□□□ -0.03
PRPF40B-206ENST00000547764 NAA50Q9GZZ1 169 aaKnown RBP14.87□□□□□ -0.03
PRPF40B-206ENST00000547764 TOLLIPQ9H0E2 274 aa14.87□□□□□ -0.03
PRPF40B-206ENST00000547764 GHITMQ9H3K2 345 aa14.87□□□□□ -0.03
PRPF40B-206ENST00000547764 PLSCR3Q9NRY6 295 aa14.87□□□□□ -0.03
PRPF40B-206ENST00000547764 RNF150Q9ULK6 438 aa14.87□□□□□ -0.03
PRPF40B-206ENST00000547764 TRAV18A0A075B6X5 111 aa14.86□□□□□ -0.03
PRPF40B-206ENST00000547764 M0QZ24 198 aa14.86□□□□□ -0.03
PRPF40B-206ENST00000547764 SSX5O60225 188 aa14.86□□□□□ -0.03
PRPF40B-206ENST00000547764 DIRAS3O95661 229 aa14.86□□□□□ -0.03
PRPF40B-206ENST00000547764 GNG2P59768 71 aa14.86□□□□□ -0.03
PRPF40B-206ENST00000547764 PITPNAQ00169 270 aa14.86□□□□□ -0.03
PRPF40B-206ENST00000547764 ANKRD13BQ86YJ7 626 aa14.86□□□□□ -0.03
PRPF40B-206ENST00000547764 Q8N9W7 124 aa14.86□□□□□ -0.03
PRPF40B-206ENST00000547764 OR10J5Q8NHC4 309 aa14.86□□□□□ -0.03
PRPF40B-206ENST00000547764 A0A0A6YYH2 397 aa14.85□□□□□ -0.03
PRPF40B-206ENST00000547764 A6NJ64 397 aa14.85□□□□□ -0.03
PRPF40B-206ENST00000547764 TFAP2AP05549 437 aa14.85□□□□□ -0.03
PRPF40B-206ENST00000547764 CT45A6P0DMU7 189 aa14.85□□□□□ -0.03
PRPF40B-206ENST00000547764 CT45A5P0DMU8 189 aa14.85□□□□□ -0.03
PRPF40B-206ENST00000547764 CT45A7P0DMV0 189 aa14.85□□□□□ -0.03
PRPF40B-206ENST00000547764 CD28P10747 220 aa14.85□□□□□ -0.03
PRPF40B-206ENST00000547764 ALDH3B2P48448 385 aa14.85□□□□□ -0.03
PRPF40B-206ENST00000547764 F2RL1P55085 397 aa14.85□□□□□ -0.03
PRPF40B-206ENST00000547764 ABCG5Q9H222 651 aa14.85□□□□□ -0.03
PRPF40B-206ENST00000547764 DCSTAMPQ9H295 470 aa14.85□□□□□ -0.03
PRPF40B-206ENST00000547764 DIABLOQ9NR28 239 aa14.85□□□□□ -0.03
PRPF40B-206ENST00000547764 WNK1Q9H4A3 2382 aa14.85□□□□□ -0.03
PRPF40B-206ENST00000547764 PKD1L1Q8TDX9 2849 aa14.85□□□□□ -0.03
PRPF40B-206ENST00000547764 MGAM2Q2M2H8 2515 aa14.85□□□□□ -0.03
PRPF40B-206ENST00000547764 PROP1O75360 226 aa14.84□□□□□ -0.03
PRPF40B-206ENST00000547764 FBXO24O75426 580 aa14.84□□□□□ -0.03
PRPF40B-206ENST00000547764 GABARAPO95166 117 aa14.84□□□□□ -0.03
PRPF40B-206ENST00000547764 CTF1Q16619 201 aa14.84□□□□□ -0.03
PRPF40B-206ENST00000547764 GPR107Q5VW38 600 aa14.84□□□□□ -0.03
PRPF40B-206ENST00000547764 TREML4Q6UXN2 200 aa14.84□□□□□ -0.03
PRPF40B-206ENST00000547764 CENPVQ7Z7K6 275 aaPredicted RBP14.84□□□□□ -0.03
PRPF40B-206ENST00000547764 OR8H1Q8NGG4 311 aa14.84□□□□□ -0.03
PRPF40B-206ENST00000547764 RITA1Q96K30 269 aa14.84□□□□□ -0.03
PRPF40B-206ENST00000547764 LIN7CQ9NUP9 197 aaKnown RBP14.84□□□□□ -0.03
PRPF40B-206ENST00000547764 ZNF221Q9UK13 617 aa14.84□□□□□ -0.03
PRPF40B-206ENST00000547764 TET2Q6N021 2002 aaPredicted RBP14.83□□□□□ -0.03
PRPF40B-206ENST00000547764 NBEAL1Q6ZS30 2694 aa14.83□□□□□ -0.03
PRPF40B-206ENST00000547764 GPR12P47775 334 aa14.83□□□□□ -0.04
PRPF40B-206ENST00000547764 UBE2NLQ5JXB2 153 aa14.83□□□□□ -0.04
PRPF40B-206ENST00000547764 FAM131AQ6UXB0 335 aa14.83□□□□□ -0.04
PRPF40B-206ENST00000547764 GLDNQ6ZMI3 551 aaPredicted RBP14.83□□□□□ -0.04
PRPF40B-206ENST00000547764 GPR141Q7Z602 305 aa14.83□□□□□ -0.04
PRPF40B-206ENST00000547764 SAMD12Q8N8I0 201 aa14.83□□□□□ -0.04
PRPF40B-206ENST00000547764 OR5AU1Q8NGC0 362 aa14.83□□□□□ -0.04
PRPF40B-206ENST00000547764 KCTD12Q96CX2 325 aaKnown RBP14.83□□□□□ -0.04
PRPF40B-206ENST00000547764 S100A16Q96FQ6 103 aaKnown RBP14.83□□□□□ -0.04
PRPF40B-206ENST00000547764 GINS4Q9BRT9 223 aa14.83□□□□□ -0.04
PRPF40B-206ENST00000547764 AUNIPQ9H7T9 357 aa14.83□□□□□ -0.04
PRPF40B-206ENST00000547764 LINC01548A6NM66 108 aa14.82□□□□□ -0.04
PRPF40B-206ENST00000547764 IGHG2P01859 326 aa14.82□□□□□ -0.04
PRPF40B-206ENST00000547764 OR8U9P0C7N5 309 aa14.82□□□□□ -0.04
PRPF40B-206ENST00000547764 ACTBP60709 375 aa14.82□□□□□ -0.04
PRPF40B-206ENST00000547764 MMDQ15546 238 aa14.82□□□□□ -0.04
PRPF40B-206ENST00000547764 C2orf68Q2NKX9 166 aa14.82□□□□□ -0.04
PRPF40B-206ENST00000547764 H1FOOQ8IZA3 346 aaPredicted RBP14.82□□□□□ -0.04
PRPF40B-206ENST00000547764 FAM71E2Q8N5Q1 922 aa14.82□□□□□ -0.04
PRPF40B-206ENST00000547764 DRAXINQ8NBI3 349 aaPredicted RBP14.82□□□□□ -0.04
PRPF40B-206ENST00000547764 OR8U1Q8NH10 309 aa14.82□□□□□ -0.04
PRPF40B-206ENST00000547764 RASL11BQ9BPW5 248 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms