RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 EXOSC4Q9NPD3 245 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-216ENST00000545663 TMEM138Q9NPI0 162 aa11.6□□□□□ -0.55
CLSTN3-216ENST00000545663 ADAM30Q9UKF2 790 aa11.6□□□□□ -0.55
CLSTN3-216ENST00000545663 IGHV7-81A0A0B4J1V7 117 aa11.59□□□□□ -0.55
CLSTN3-216ENST00000545663 TRAV39A0A0B4J263 110 aa11.59□□□□□ -0.55
CLSTN3-216ENST00000545663 A0A1W2PN81 502 aa11.59□□□□□ -0.55
CLSTN3-216ENST00000545663 CHRNA7P36544 502 aa11.59□□□□□ -0.55
CLSTN3-216ENST00000545663 SOX2P48431 317 aa11.59□□□□□ -0.55
CLSTN3-216ENST00000545663 PSMD7P51665 324 aa11.59□□□□□ -0.55
CLSTN3-216ENST00000545663 RPS11P62280 158 aaKnown RBP eCLIP11.59□□□□□ -0.55
CLSTN3-216ENST00000545663 ECSCRQ19T08 205 aa11.59□□□□□ -0.55
CLSTN3-216ENST00000545663 C19orf54Q5BKX5 351 aa11.59□□□□□ -0.55
CLSTN3-216ENST00000545663 SPIN3Q5JUX0 258 aa11.59□□□□□ -0.55
CLSTN3-216ENST00000545663 LYG2Q86SG7 212 aa11.59□□□□□ -0.55
CLSTN3-216ENST00000545663 NKAIN3Q8N8D7 197 aa11.59□□□□□ -0.55
CLSTN3-216ENST00000545663 OR9G4Q8NGQ1 327 aa11.59□□□□□ -0.55
CLSTN3-216ENST00000545663 OR10AC1Q8NH08 325 aa11.59□□□□□ -0.55
CLSTN3-216ENST00000545663 RTN4IP1Q8WWV3 396 aaPredicted RBP11.59□□□□□ -0.55
CLSTN3-216ENST00000545663 MUL1Q969V5 352 aa11.59□□□□□ -0.55
CLSTN3-216ENST00000545663 DERL3Q96Q80 235 aa11.59□□□□□ -0.55
CLSTN3-216ENST00000545663 RHOFQ9HBH0 211 aa11.59□□□□□ -0.55
CLSTN3-216ENST00000545663 HMG20AQ9NP66 347 aa11.59□□□□□ -0.55
CLSTN3-216ENST00000545663 ETAA1Q9NY74 926 aa11.59□□□□□ -0.55
CLSTN3-216ENST00000545663 TRBV5-7A0A0A0MS05 114 aa11.58□□□□□ -0.56
CLSTN3-216ENST00000545663 TRDV1A0A1B0GX56 115 aa11.58□□□□□ -0.56
CLSTN3-216ENST00000545663 XRCC3O43542 346 aa11.58□□□□□ -0.56
CLSTN3-216ENST00000545663 SC5DO75845 299 aa11.58□□□□□ -0.56
CLSTN3-216ENST00000545663 CSN3P07498 182 aa11.58□□□□□ -0.56
CLSTN3-216ENST00000545663 MTCP1P56278 107 aa11.58□□□□□ -0.56
CLSTN3-216ENST00000545663 TNFRSF9Q07011 255 aa11.58□□□□□ -0.56
CLSTN3-216ENST00000545663 KLF5Q13887 457 aaPredicted RBP11.58□□□□□ -0.56
CLSTN3-216ENST00000545663 HSD17B12Q53GQ0 312 aa11.58□□□□□ -0.56
CLSTN3-216ENST00000545663 ZNF529Q6P280 563 aa11.58□□□□□ -0.56
CLSTN3-216ENST00000545663 CD200R1LQ6Q8B3 271 aa11.58□□□□□ -0.56
CLSTN3-216ENST00000545663 CEACAM19Q7Z692 300 aa11.58□□□□□ -0.56
CLSTN3-216ENST00000545663 Q8IYB0 196 aa11.58□□□□□ -0.56
CLSTN3-216ENST00000545663 Q8N402 240 aa11.58□□□□□ -0.56
CLSTN3-216ENST00000545663 OR13C9Q8NGT0 318 aa11.58□□□□□ -0.56
CLSTN3-216ENST00000545663 KCTD12Q96CX2 325 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-216ENST00000545663 RHOVQ96L33 236 aa11.58□□□□□ -0.56
CLSTN3-216ENST00000545663 SPACA5Q96QH8 159 aa11.58□□□□□ -0.56
CLSTN3-216ENST00000545663 OR14A2Q96R54 314 aa11.58□□□□□ -0.56
CLSTN3-216ENST00000545663 KIF25Q9UIL4 384 aa11.58□□□□□ -0.56
CLSTN3-216ENST00000545663 SSR3Q9UNL2 185 aa11.58□□□□□ -0.56
CLSTN3-216ENST00000545663 DMBT1Q9UGM3 2413 aaPredicted RBP11.58□□□□□ -0.56
CLSTN3-216ENST00000545663 PRSS29PA6NIE9 313 aa11.57□□□□□ -0.56
CLSTN3-216ENST00000545663 OR11H12B2RN74 326 aa11.57□□□□□ -0.56
CLSTN3-216ENST00000545663 SLC33A1O00400 549 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-216ENST00000545663 IL1AP01583 271 aa11.57□□□□□ -0.56
CLSTN3-216ENST00000545663 UCHL1P09936 223 aa11.57□□□□□ -0.56
CLSTN3-216ENST00000545663 ZNF44P15621 663 aa11.57□□□□□ -0.56
CLSTN3-216ENST00000545663 BDKRB2P30411 391 aa11.57□□□□□ -0.56
CLSTN3-216ENST00000545663 SSTR5P35346 364 aa11.57□□□□□ -0.56
CLSTN3-216ENST00000545663 SYNJ2BPP57105 145 aa11.57□□□□□ -0.56
CLSTN3-216ENST00000545663 NDPQ00604 133 aa11.57□□□□□ -0.56
CLSTN3-216ENST00000545663 Q6P435 159 aa11.57□□□□□ -0.56
CLSTN3-216ENST00000545663 TMEM203Q969S6 136 aa11.57□□□□□ -0.56
CLSTN3-216ENST00000545663 LINC00574Q9H8X3 128 aa11.57□□□□□ -0.56
CLSTN3-216ENST00000545663 A3GALT2U3KPV4 340 aa11.57□□□□□ -0.56
CLSTN3-216ENST00000545663 MEIKINA0A087WXM9 373 aa11.56□□□□□ -0.56
CLSTN3-216ENST00000545663 ZNF785A8K8V0 405 aa11.56□□□□□ -0.56
CLSTN3-216ENST00000545663 NPIPB11E5RHQ5 1161 aa11.56□□□□□ -0.56
CLSTN3-216ENST00000545663 HSPB6O14558 160 aa11.56□□□□□ -0.56
CLSTN3-216ENST00000545663 CSN2P05814 226 aa11.56□□□□□ -0.56
CLSTN3-216ENST00000545663 CD36P16671 472 aa11.56□□□□□ -0.56
CLSTN3-216ENST00000545663 IGFBP3P17936 291 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-216ENST00000545663 SRMP19623 302 aa11.56□□□□□ -0.56
CLSTN3-216ENST00000545663 FGF9P31371 208 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-216ENST00000545663 MMDQ15546 238 aa11.56□□□□□ -0.56
CLSTN3-216ENST00000545663 SSX1Q16384 188 aa11.56□□□□□ -0.56
CLSTN3-216ENST00000545663 SAXO1Q8IYX7 474 aa11.56□□□□□ -0.56
CLSTN3-216ENST00000545663 MAPKAPK5-AS1Q8N8E1 139 aa11.56□□□□□ -0.56
CLSTN3-216ENST00000545663 ZNF565Q8N9K5 539 aa11.56□□□□□ -0.56
CLSTN3-216ENST00000545663 MRGPRDQ8TDS7 321 aa11.56□□□□□ -0.56
CLSTN3-216ENST00000545663 TAS2R4Q9NYW5 299 aa11.56□□□□□ -0.56
CLSTN3-216ENST00000545663 FOXA2Q9Y261 457 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-216ENST00000545663 IGKV1-12A0A0C4DH73 117 aa11.55□□□□□ -0.56
CLSTN3-216ENST00000545663 ANKRD34BA5PLL1 514 aa11.55□□□□□ -0.56
CLSTN3-216ENST00000545663 GABRPO00591 440 aa11.55□□□□□ -0.56
CLSTN3-216ENST00000545663 PDCD5O14737 125 aa11.55□□□□□ -0.56
CLSTN3-216ENST00000545663 IGKV1D-12P01611 117 aa11.55□□□□□ -0.56
CLSTN3-216ENST00000545663 MYL9P24844 172 aa11.55□□□□□ -0.56
CLSTN3-216ENST00000545663 MECP2P51608 486 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-216ENST00000545663 RPS25P62851 125 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-216ENST00000545663 DYRK1AQ13627 763 aa11.55□□□□□ -0.56
CLSTN3-216ENST00000545663 KISS1Q15726 138 aa11.55□□□□□ -0.56
CLSTN3-216ENST00000545663 GLT8D1Q68CQ7 371 aa11.55□□□□□ -0.56
CLSTN3-216ENST00000545663 OR13C5Q8NGS8 318 aa11.55□□□□□ -0.56
CLSTN3-216ENST00000545663 GPER1Q99527 375 aa11.55□□□□□ -0.56
CLSTN3-216ENST00000545663 S100A13Q99584 98 aa11.55□□□□□ -0.56
CLSTN3-216ENST00000545663 UQCC2Q9BRT2 126 aa11.55□□□□□ -0.56
CLSTN3-216ENST00000545663 APOBP04114 4563 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-216ENST00000545663 TRAV1-2A0A0B4J238 106 aa11.54□□□□□ -0.56
CLSTN3-216ENST00000545663 IGKV1-9A0A0C4DH69 117 aa11.54□□□□□ -0.56
CLSTN3-216ENST00000545663 ARPC1BO15143 372 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-216ENST00000545663 RTL8CO15255 209 aa11.54□□□□□ -0.56
CLSTN3-216ENST00000545663 ZNF780AO75290 641 aaPredicted RBP11.54□□□□□ -0.56
CLSTN3-216ENST00000545663 HLA-DRB1P01911 266 aa11.54□□□□□ -0.56
CLSTN3-216ENST00000545663 SMIM18P0DKX4 95 aa11.54□□□□□ -0.56
CLSTN3-216ENST00000545663 EGR2P11161 476 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms