RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 OPN1MW3P0DN78 364 aa12.47□□□□□ -0.41
CCDC78-216ENST00000544996 SNRPBP14678 240 aaKnown RBP12.47□□□□□ -0.41
CCDC78-216ENST00000544996 SCAND1P57086 179 aa12.47□□□□□ -0.41
CCDC78-216ENST00000544996 PHF21AQ96BD5 680 aa12.47□□□□□ -0.41
CCDC78-216ENST00000544996 NABP2Q9BQ15 211 aa12.47□□□□□ -0.41
CCDC78-216ENST00000544996 MRPL20Q9BYC9 149 aaKnown RBP12.47□□□□□ -0.41
CCDC78-216ENST00000544996 C11orf54Q9H0W9 315 aaPredicted RBP12.47□□□□□ -0.41
CCDC78-216ENST00000544996 RNF167Q9H6Y7 350 aa12.47□□□□□ -0.41
CCDC78-216ENST00000544996 TCRBV4S1A1TA0A5B7 111 aa12.46□□□□□ -0.41
CCDC78-216ENST00000544996 AIREO43918 545 aa12.46□□□□□ -0.41
CCDC78-216ENST00000544996 IGHG2P01859 326 aa12.46□□□□□ -0.41
CCDC78-216ENST00000544996 CD83Q01151 205 aa12.46□□□□□ -0.41
CCDC78-216ENST00000544996 CDNFQ49AH0 187 aa12.46□□□□□ -0.41
CCDC78-216ENST00000544996 IDNKQ5T6J7 187 aa12.46□□□□□ -0.41
CCDC78-216ENST00000544996 Q8N9W7 124 aa12.46□□□□□ -0.41
CCDC78-216ENST00000544996 OR4F17Q8NGA8 305 aa12.46□□□□□ -0.41
CCDC78-216ENST00000544996 OR10J5Q8NHC4 309 aa12.46□□□□□ -0.41
CCDC78-216ENST00000544996 LGALS14Q8TCE9 139 aa12.46□□□□□ -0.41
CCDC78-216ENST00000544996 CHPT1Q8WUD6 406 aa12.46□□□□□ -0.41
CCDC78-216ENST00000544996 ABHD14BQ96IU4 210 aa12.46□□□□□ -0.41
CCDC78-216ENST00000544996 OR4F4Q96R69 305 aa12.46□□□□□ -0.41
CCDC78-216ENST00000544996 AGMATQ9BSE5 352 aa12.46□□□□□ -0.41
CCDC78-216ENST00000544996 ABCG5Q9H222 651 aa12.46□□□□□ -0.41
CCDC78-216ENST00000544996 PLSCR3Q9NRY6 295 aa12.46□□□□□ -0.41
CCDC78-216ENST00000544996 ZNF221Q9UK13 617 aa12.46□□□□□ -0.41
CCDC78-216ENST00000544996 ETV7Q9Y603 341 aa12.46□□□□□ -0.41
CCDC78-216ENST00000544996 PSMB11A5LHX3 300 aa12.45□□□□□ -0.42
CCDC78-216ENST00000544996 BET1O15155 118 aa12.45□□□□□ -0.42
CCDC78-216ENST00000544996 KCNAB3O43448 404 aa12.45□□□□□ -0.42
CCDC78-216ENST00000544996 TMEM127O75204 238 aa12.45□□□□□ -0.42
CCDC78-216ENST00000544996 DIRAS3O95661 229 aa12.45□□□□□ -0.42
CCDC78-216ENST00000544996 CLEC2LP0C7M8 214 aa12.45□□□□□ -0.42
CCDC78-216ENST00000544996 SLC35B1P78383 322 aa12.45□□□□□ -0.42
CCDC78-216ENST00000544996 MMDQ15546 238 aa12.45□□□□□ -0.42
CCDC78-216ENST00000544996 SRSF7Q16629 238 aaKnown RBP eCLIP12.45□□□□□ -0.42
CCDC78-216ENST00000544996 CROCCP3Q8IVE0 287 aa12.45□□□□□ -0.42
CCDC78-216ENST00000544996 R3HDM4Q96D70 268 aa12.45□□□□□ -0.42
CCDC78-216ENST00000544996 ZNF251Q9BRH9 671 aa12.45□□□□□ -0.42
CCDC78-216ENST00000544996 GON7Q9BXV9 100 aa12.45□□□□□ -0.42
CCDC78-216ENST00000544996 PARP12Q9H0J9 701 aaKnown RBP12.45□□□□□ -0.42
CCDC78-216ENST00000544996 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.45□□□□□ -0.42
CCDC78-216ENST00000544996 RHBDL2Q9NX52 303 aa12.45□□□□□ -0.42
CCDC78-216ENST00000544996 RDH8Q9NYR8 311 aa12.45□□□□□ -0.42
CCDC78-216ENST00000544996 ZNF230Q9UIE0 474 aaPredicted RBP12.45□□□□□ -0.42
CCDC78-216ENST00000544996 TSSC4Q9Y5U2 329 aaPredicted RBP12.45□□□□□ -0.42
CCDC78-216ENST00000544996 TET2Q6N021 2002 aaPredicted RBP12.45□□□□□ -0.42
CCDC78-216ENST00000544996 TRRAPQ9Y4A5 3859 aa12.44□□□□□ -0.42
CCDC78-216ENST00000544996 IGKV1-6A0A0C4DH72 117 aa12.44□□□□□ -0.42
CCDC78-216ENST00000544996 OR5H14A6NHG9 310 aa12.44□□□□□ -0.42
CCDC78-216ENST00000544996 AP4M1O00189 453 aa12.44□□□□□ -0.42
CCDC78-216ENST00000544996 GSTP1P09211 210 aaKnown RBP12.44□□□□□ -0.42
CCDC78-216ENST00000544996 GSTT2P0CG29 244 aa12.44□□□□□ -0.42
CCDC78-216ENST00000544996 GSTT2BP0CG30 244 aa12.44□□□□□ -0.42
CCDC78-216ENST00000544996 DTYMKP23919 212 aa12.44□□□□□ -0.42
CCDC78-216ENST00000544996 MC5RP33032 325 aa12.44□□□□□ -0.42
CCDC78-216ENST00000544996 SOX6P35712 828 aa12.44□□□□□ -0.42
CCDC78-216ENST00000544996 GPR12P47775 334 aa12.44□□□□□ -0.42
CCDC78-216ENST00000544996 F2RL1P55085 397 aa12.44□□□□□ -0.42
CCDC78-216ENST00000544996 ACTBP60709 375 aa12.44□□□□□ -0.42
CCDC78-216ENST00000544996 PITPNAQ00169 270 aa12.44□□□□□ -0.42
CCDC78-216ENST00000544996 RPL39P5Q59GN2 51 aa12.44□□□□□ -0.42
CCDC78-216ENST00000544996 KHDC1LQ5JSQ8 128 aa12.44□□□□□ -0.42
CCDC78-216ENST00000544996 HACD4Q5VWC8 232 aa12.44□□□□□ -0.42
CCDC78-216ENST00000544996 FAM71E2Q8N5Q1 922 aa12.44□□□□□ -0.42
CCDC78-216ENST00000544996 YIPF6Q96EC8 236 aa12.44□□□□□ -0.42
CCDC78-216ENST00000544996 NOL4LQ96MY1 436 aaPredicted RBP12.44□□□□□ -0.42
CCDC78-216ENST00000544996 RNF150Q9ULK6 438 aa12.44□□□□□ -0.42
CCDC78-216ENST00000544996 PKD1L1Q8TDX9 2849 aa12.43□□□□□ -0.42
CCDC78-216ENST00000544996 A0A1W2PRX2 142 aa12.43□□□□□ -0.42
CCDC78-216ENST00000544996 CT45A6P0DMU7 189 aa12.43□□□□□ -0.42
CCDC78-216ENST00000544996 CT45A5P0DMU8 189 aa12.43□□□□□ -0.42
CCDC78-216ENST00000544996 CT45A7P0DMV0 189 aa12.43□□□□□ -0.42
CCDC78-216ENST00000544996 GNG2P59768 71 aa12.43□□□□□ -0.42
CCDC78-216ENST00000544996 IGSF11Q5DX21 431 aa12.43□□□□□ -0.42
CCDC78-216ENST00000544996 TCTEX1D4Q5JR98 221 aa12.43□□□□□ -0.42
CCDC78-216ENST00000544996 Q6ZS49 121 aa12.43□□□□□ -0.42
CCDC78-216ENST00000544996 ZNF329Q86UD4 541 aa12.43□□□□□ -0.42
CCDC78-216ENST00000544996 STPG2Q8N412 459 aa12.43□□□□□ -0.42
CCDC78-216ENST00000544996 COMMD1Q8N668 190 aa12.43□□□□□ -0.42
CCDC78-216ENST00000544996 MAFIPQ8WZ33 124 aa12.43□□□□□ -0.42
CCDC78-216ENST00000544996 GINS4Q9BRT9 223 aa12.43□□□□□ -0.42
CCDC78-216ENST00000544996 CABLES2Q9BTV7 478 aa12.43□□□□□ -0.42
CCDC78-216ENST00000544996 TOLLIPQ9H0E2 274 aa12.43□□□□□ -0.42
CCDC78-216ENST00000544996 KIAA1456Q9P272 454 aa12.43□□□□□ -0.42
CCDC78-216ENST00000544996 TRBV6-7A0A0A0MS04 114 aa12.42□□□□□ -0.42
CCDC78-216ENST00000544996 TMEM235A6NFC5 223 aa12.42□□□□□ -0.42
CCDC78-216ENST00000544996 ADARB2-AS1A8MUL3 147 aa12.42□□□□□ -0.42
CCDC78-216ENST00000544996 H7C2Y5 167 aa12.42□□□□□ -0.42
CCDC78-216ENST00000544996 NBR2O15453 112 aa12.42□□□□□ -0.42
CCDC78-216ENST00000544996 PNLIPRP3Q17RR3 467 aa12.42□□□□□ -0.42
CCDC78-216ENST00000544996 C10orf99Q6UWK7 81 aa12.42□□□□□ -0.42
CCDC78-216ENST00000544996 FAM131AQ6UXB0 335 aa12.42□□□□□ -0.42
CCDC78-216ENST00000544996 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.42□□□□□ -0.42
CCDC78-216ENST00000544996 OR5H6Q8NGV6 325 aa12.42□□□□□ -0.42
CCDC78-216ENST00000544996 RBMXL1Q96E39 390 aaKnown RBP12.42□□□□□ -0.42
CCDC78-216ENST00000544996 ST6GALNAC5Q9BVH7 336 aa12.42□□□□□ -0.42
CCDC78-216ENST00000544996 DCSTAMPQ9H295 470 aa12.42□□□□□ -0.42
CCDC78-216ENST00000544996 DIABLOQ9NR28 239 aa12.42□□□□□ -0.42
CCDC78-216ENST00000544996 LINC00527Q9UJ94 153 aa12.42□□□□□ -0.42
CCDC78-216ENST00000544996 WASHC3Q9Y3C0 194 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms