RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 KMT2AQ03164 3969 aa9.86□□□□□ -0.83
USP28-212ENST00000544750 IGHV4OR15-8A0A075B7B6 117 aa9.86□□□□□ -0.83
USP28-212ENST00000544750 A0A087WW49 117 aa9.86□□□□□ -0.83
USP28-212ENST00000544750 IGHV7-81A0A0B4J1V7 117 aa9.86□□□□□ -0.83
USP28-212ENST00000544750 IGHV3-43A0A0B4J1X8 118 aa9.86□□□□□ -0.83
USP28-212ENST00000544750 LINC01619G3V211 115 aa9.86□□□□□ -0.83
USP28-212ENST00000544750 TXNL1O43396 289 aa9.86□□□□□ -0.83
USP28-212ENST00000544750 SOX15O60248 233 aa9.86□□□□□ -0.83
USP28-212ENST00000544750 JTBO76095 146 aa9.86□□□□□ -0.83
USP28-212ENST00000544750 HLA-DRB1P01911 266 aa9.86□□□□□ -0.83
USP28-212ENST00000544750 OR8U9P0C7N5 309 aa9.86□□□□□ -0.83
USP28-212ENST00000544750 IGHV3-43DP0DP04 118 aa9.86□□□□□ -0.83
USP28-212ENST00000544750 MGMTP16455 207 aa9.86□□□□□ -0.83
USP28-212ENST00000544750 PSMA1P25786 263 aaKnown RBP9.86□□□□□ -0.83
USP28-212ENST00000544750 IL3RAP26951 378 aa9.86□□□□□ -0.83
USP28-212ENST00000544750 GPR176Q14439 515 aa9.86□□□□□ -0.83
USP28-212ENST00000544750 TRAM1Q15629 374 aa9.86□□□□□ -0.83
USP28-212ENST00000544750 UBE2UQ5VVX9 321 aa9.86□□□□□ -0.83
USP28-212ENST00000544750 UBALD1Q8TB05 177 aa9.86□□□□□ -0.83
USP28-212ENST00000544750 ARPC1AQ92747 370 aa9.86□□□□□ -0.83
USP28-212ENST00000544750 ARL11Q969Q4 196 aa9.86□□□□□ -0.83
USP28-212ENST00000544750 MRPS24Q96EL2 167 aaKnown RBP9.86□□□□□ -0.83
USP28-212ENST00000544750 SPATA25Q9BR10 227 aa9.86□□□□□ -0.83
USP28-212ENST00000544750 NDUFB11Q9NX14 153 aa9.86□□□□□ -0.83
USP28-212ENST00000544750 TRAV41A0A0B4J266 112 aa9.85□□□□□ -0.83
USP28-212ENST00000544750 SHISA3A0PJX4 238 aa9.85□□□□□ -0.83
USP28-212ENST00000544750 SDCBPO00560 298 aaPredicted RBP9.85□□□□□ -0.83
USP28-212ENST00000544750 SLC22A1O15245 554 aa9.85□□□□□ -0.83
USP28-212ENST00000544750 HSPA12AO43301 675 aa9.85□□□□□ -0.83
USP28-212ENST00000544750 ORC5O43913 435 aa9.85□□□□□ -0.83
USP28-212ENST00000544750 IGLV1-51P01701 117 aa9.85□□□□□ -0.83
USP28-212ENST00000544750 CRIP2P52943 208 aaPredicted RBP9.85□□□□□ -0.83
USP28-212ENST00000544750 QRFPP83859 136 aa9.85□□□□□ -0.83
USP28-212ENST00000544750 UNC119Q13432 240 aa9.85□□□□□ -0.83
USP28-212ENST00000544750 LSAMPQ13449 338 aa9.85□□□□□ -0.83
USP28-212ENST00000544750 HAGHQ16775 308 aa9.85□□□□□ -0.83
USP28-212ENST00000544750 OR10K2Q6IF99 312 aa9.85□□□□□ -0.83
USP28-212ENST00000544750 CD200R1LQ6Q8B3 271 aa9.85□□□□□ -0.83
USP28-212ENST00000544750 RITA1Q96K30 269 aa9.85□□□□□ -0.83
USP28-212ENST00000544750 YTHDF1Q9BYJ9 559 aaKnown RBP9.85□□□□□ -0.83
USP28-212ENST00000544750 SELENOIQ9C0D9 397 aa9.85□□□□□ -0.83
USP28-212ENST00000544750 GHITMQ9H3K2 345 aa9.85□□□□□ -0.83
USP28-212ENST00000544750 DNAH10Q8IVF4 4471 aa9.84□□□□□ -0.83
USP28-212ENST00000544750 FAM90A7PA6NKC0 464 aa9.84□□□□□ -0.83
USP28-212ENST00000544750 FAM90A23PA8MXZ1 464 aa9.84□□□□□ -0.83
USP28-212ENST00000544750 CRTAPO75718 401 aaPredicted RBP9.84□□□□□ -0.83
USP28-212ENST00000544750 LGALS1P09382 135 aaKnown RBP9.84□□□□□ -0.83
USP28-212ENST00000544750 CNTFRP26992 372 aa9.84□□□□□ -0.83
USP28-212ENST00000544750 CALRP27797 417 aaKnown RBP9.84□□□□□ -0.83
USP28-212ENST00000544750 NDPQ00604 133 aa9.84□□□□□ -0.83
USP28-212ENST00000544750 MMDQ15546 238 aa9.84□□□□□ -0.83
USP28-212ENST00000544750 CT45A1Q5HYN5 189 aa9.84□□□□□ -0.83
USP28-212ENST00000544750 ATAD3CQ5T2N8 411 aa9.84□□□□□ -0.83
USP28-212ENST00000544750 GLT8D1Q68CQ7 371 aa9.84□□□□□ -0.83
USP28-212ENST00000544750 ZNF773Q6PK81 442 aa9.84□□□□□ -0.83
USP28-212ENST00000544750 ZNF497Q6ZNH5 498 aa9.84□□□□□ -0.83
USP28-212ENST00000544750 HAPLN4Q86UW8 402 aa9.84□□□□□ -0.83
USP28-212ENST00000544750 GAPTQ8N292 157 aa9.84□□□□□ -0.83
USP28-212ENST00000544750 SVOPQ8N4V2 548 aa9.84□□□□□ -0.83
USP28-212ENST00000544750 CT45A3Q8NHU0 189 aa9.84□□□□□ -0.83
USP28-212ENST00000544750 FAM46BQ96A09 425 aa9.84□□□□□ -0.83
USP28-212ENST00000544750 GHRLQ9UBU3 117 aa9.84□□□□□ -0.83
USP28-212ENST00000544750 AK6Q9Y3D8 172 aaKnown RBP9.84□□□□□ -0.83
USP28-212ENST00000544750 FBXO7Q9Y3I1 522 aa9.84□□□□□ -0.83
USP28-212ENST00000544750 LRRC42Q9Y546 428 aa9.84□□□□□ -0.83
USP28-212ENST00000544750 A0A0A6YYD4 124 aa9.83□□□□□ -0.84
USP28-212ENST00000544750 TMEM30CPA0ZSE6 113 aa9.83□□□□□ -0.84
USP28-212ENST00000544750 TMEM14DPA8MWL7 114 aa9.83□□□□□ -0.84
USP28-212ENST00000544750 SLC17A2O00624 439 aa9.83□□□□□ -0.84
USP28-212ENST00000544750 LANCL1O43813 399 aa9.83□□□□□ -0.84
USP28-212ENST00000544750 ARL6IP5O75915 188 aa9.83□□□□□ -0.84
USP28-212ENST00000544750 UBBP0CG47 229 aa9.83□□□□□ -0.84
USP28-212ENST00000544750 HTR2CP28335 458 aa9.83□□□□□ -0.84
USP28-212ENST00000544750 BLVRBP30043 206 aaPredicted RBP9.83□□□□□ -0.84
USP28-212ENST00000544750 ACTBP60709 375 aa9.83□□□□□ -0.84
USP28-212ENST00000544750 PITPNAQ00169 270 aa9.83□□□□□ -0.84
USP28-212ENST00000544750 RAB12Q6IQ22 244 aa9.83□□□□□ -0.84
USP28-212ENST00000544750 SGPP2Q8IWX5 399 aa9.83□□□□□ -0.84
USP28-212ENST00000544750 OR6M1Q8NGM8 313 aa9.83□□□□□ -0.84
USP28-212ENST00000544750 TM2D1Q9BX74 207 aa9.83□□□□□ -0.84
USP28-212ENST00000544750 PARP11Q9NR21 331 aa9.83□□□□□ -0.84
USP28-212ENST00000544750 TRDV1A0A1B0GX56 115 aa9.82□□□□□ -0.84
USP28-212ENST00000544750 C12orf77C9JDV5 145 aa9.82□□□□□ -0.84
USP28-212ENST00000544750 PDCD6O75340 191 aa9.82□□□□□ -0.84
USP28-212ENST00000544750 NDUFA3O95167 84 aa9.82□□□□□ -0.84
USP28-212ENST00000544750 BPNT1O95861 308 aa9.82□□□□□ -0.84
USP28-212ENST00000544750 MT-ND4P03905 459 aa9.82□□□□□ -0.84
USP28-212ENST00000544750 RPS27AP62979 156 aaKnown RBP9.82□□□□□ -0.84
USP28-212ENST00000544750 P2RY14Q15391 338 aa9.82□□□□□ -0.84
USP28-212ENST00000544750 C5orf64Q2M2E5 130 aa9.82□□□□□ -0.84
USP28-212ENST00000544750 KCTD21Q4G0X4 260 aa9.82□□□□□ -0.84
USP28-212ENST00000544750 STEAP3Q658P3 488 aa9.82□□□□□ -0.84
USP28-212ENST00000544750 NPBQ8NG41 125 aa9.82□□□□□ -0.84
USP28-212ENST00000544750 CASTOR1Q8WTX7 329 aa9.82□□□□□ -0.84
USP28-212ENST00000544750 CCDC107Q8WV48 283 aa9.82□□□□□ -0.84
USP28-212ENST00000544750 FCGR1BQ92637 280 aa9.82□□□□□ -0.84
USP28-212ENST00000544750 OR4C12Q96R67 309 aa9.82□□□□□ -0.84
USP28-212ENST00000544750 NICN1Q9BSH3 213 aa9.82□□□□□ -0.84
USP28-212ENST00000544750 THAP7Q9BT49 309 aaPredicted RBP9.82□□□□□ -0.84
USP28-212ENST00000544750 TMEM59Q9BXS4 323 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms