RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 MANBALQ9NQG1 85 aa10.99□□□□□ -0.65
CPSF7-223ENST00000544669 PCSK5Q92824 1860 aa10.99□□□□□ -0.65
CPSF7-223ENST00000544669 TRAV17A0A0B4J275 112 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 LRRC30A6NM36 301 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 CLDN1O95832 211 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 IAPPP10997 89 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 COX5AP20674 150 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 GZMHP20718 246 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 S100A2P29034 98 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 PSMB3P49720 205 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 RND2P52198 227 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 CEBPGP53567 150 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 RAB11AP62491 216 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 ELOBQ15370 118 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 ZNF610Q8N9Z0 462 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 BTF3L4Q96K17 158 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 GPHA2Q96T91 129 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 CTXND1A0A1B0GTU2 59 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 MAP1LC3B2A6NCE7 125 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 AHRRA9YTQ3 701 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 H3BP45 60 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 CYB5BO43169 146 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 NXPH3O95157 252 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 HOXA5P20719 270 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 CDX1P47902 265 aaPredicted RBP10.98□□□□□ -0.65
CPSF7-223ENST00000544669 OR2B8PP59922 312 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 GNB2P62879 340 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 P2RY6Q15077 328 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 TGIF1Q15583 401 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 DHRS13Q6UX07 377 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 ACP7Q6ZNF0 438 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 H2BFWTQ7Z2G1 175 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 ZNF295-AS1Q8N0V1 137 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 LHX4Q969G2 390 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 RCC1LQ96I51 464 aaKnown RBP10.98□□□□□ -0.65
CPSF7-223ENST00000544669 OR4C12Q96R67 309 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 ACTR3CQ9C0K3 210 aaPredicted RBP10.98□□□□□ -0.65
CPSF7-223ENST00000544669 MAP1LC3BQ9GZQ8 125 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 OR51M1Q9H341 326 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 NAT8Q9UHE5 227 aa10.98□□□□□ -0.65
CPSF7-223ENST00000544669 SHANK1Q9Y566 2161 aa10.97□□□□□ -0.65
CPSF7-223ENST00000544669 MED19A0JLT2 244 aaPredicted RBP10.97□□□□□ -0.65
CPSF7-223ENST00000544669 SEC14L6B5MCN3 397 aa10.97□□□□□ -0.65
CPSF7-223ENST00000544669 C12orf77C9JDV5 145 aa10.97□□□□□ -0.65
CPSF7-223ENST00000544669 OR3A1P47881 315 aa10.97□□□□□ -0.65
CPSF7-223ENST00000544669 GUSBP1Q15486 140 aa10.97□□□□□ -0.65
CPSF7-223ENST00000544669 ZNF674Q2M3X9 581 aa10.97□□□□□ -0.65
CPSF7-223ENST00000544669 MBNL2Q5VZF2 373 aaKnown RBP10.97□□□□□ -0.65
CPSF7-223ENST00000544669 OR2D2Q9H210 308 aa10.97□□□□□ -0.65
CPSF7-223ENST00000544669 RBKSQ9H477 322 aa10.97□□□□□ -0.65
CPSF7-223ENST00000544669 TRBV24-1A0A075B6N3 115 aa10.96□□□□□ -0.65
CPSF7-223ENST00000544669 A0A1B0GWJ7 208 aa10.96□□□□□ -0.65
CPSF7-223ENST00000544669 SMCO3A2RU48 225 aa10.96□□□□□ -0.65
CPSF7-223ENST00000544669 ZFP92A6NM28 416 aa10.96□□□□□ -0.65
CPSF7-223ENST00000544669 PRR33A8MZF0 331 aa10.96□□□□□ -0.65
CPSF7-223ENST00000544669 H0YL77 283 aa10.96□□□□□ -0.65
CPSF7-223ENST00000544669 TIMM8AO60220 97 aaPredicted RBP10.96□□□□□ -0.65
CPSF7-223ENST00000544669 MPDU1O75352 247 aa10.96□□□□□ -0.65
CPSF7-223ENST00000544669 ZNF737O75373 536 aa10.96□□□□□ -0.65
CPSF7-223ENST00000544669 HBZP02008 142 aa10.96□□□□□ -0.65
CPSF7-223ENST00000544669 P0C879 139 aa10.96□□□□□ -0.65
CPSF7-223ENST00000544669 NQO2P16083 231 aa10.96□□□□□ -0.65
CPSF7-223ENST00000544669 DNLZQ5SXM8 178 aa10.96□□□□□ -0.65
CPSF7-223ENST00000544669 IGFL2Q6UWQ7 119 aa10.96□□□□□ -0.65
CPSF7-223ENST00000544669 LCN15Q6UWW0 184 aa10.96□□□□□ -0.65
CPSF7-223ENST00000544669 C5orf24Q7Z6I8 188 aa10.96□□□□□ -0.65
CPSF7-223ENST00000544669 TRIB1Q96RU8 372 aa10.96□□□□□ -0.65
CPSF7-223ENST00000544669 TXNDC17Q9BRA2 123 aa10.96□□□□□ -0.65
CPSF7-223ENST00000544669 RSG1Q9BU20 258 aa10.96□□□□□ -0.65
CPSF7-223ENST00000544669 GGACTQ9BVM4 153 aa10.96□□□□□ -0.65
CPSF7-223ENST00000544669 NCOR1P1Q9H4R4 102 aa10.96□□□□□ -0.65
CPSF7-223ENST00000544669 SDF2L1Q9HCN8 221 aa10.96□□□□□ -0.65
CPSF7-223ENST00000544669 PLSCR4Q9NRQ2 329 aa10.96□□□□□ -0.65
CPSF7-223ENST00000544669 ZNF727A8MUV8 499 aa10.95□□□□□ -0.66
CPSF7-223ENST00000544669 KIR2DS2P43631 304 aa10.95□□□□□ -0.66
CPSF7-223ENST00000544669 GABRA2P47869 451 aa10.95□□□□□ -0.66
CPSF7-223ENST00000544669 MEF2BQ02080 365 aaPredicted RBP10.95□□□□□ -0.66
CPSF7-223ENST00000544669 EIF4EBP1Q13541 118 aaPredicted RBP10.95□□□□□ -0.66
CPSF7-223ENST00000544669 TMEM241Q24JQ0 296 aa10.95□□□□□ -0.66
CPSF7-223ENST00000544669 VWC2Q2TAL6 325 aa10.95□□□□□ -0.66
CPSF7-223ENST00000544669 TMEM249Q2WGJ8 235 aa10.95□□□□□ -0.66
CPSF7-223ENST00000544669 FAM90A2PQ658T7 463 aa10.95□□□□□ -0.66
CPSF7-223ENST00000544669 DTD1Q8TEA8 209 aa10.95□□□□□ -0.66
CPSF7-223ENST00000544669 CA5BP1Q8WTZ4 195 aa10.95□□□□□ -0.66
CPSF7-223ENST00000544669 KCNIP2Q9NS61 270 aa10.95□□□□□ -0.66
CPSF7-223ENST00000544669 RTTNQ86VV8 2226 aa10.95□□□□□ -0.66
CPSF7-223ENST00000544669 CEBPZOSA8MTT3 80 aa10.95□□□□□ -0.66
CPSF7-223ENST00000544669 RBFOX2O43251 390 aaKnown RBP eCLIP10.95□□□□□ -0.664e-7■□□□□ 10.3
CPSF7-223ENST00000544669 LYZL6O75951 148 aa10.95□□□□□ -0.66
CPSF7-223ENST00000544669 CFHR2P36980 270 aa10.95□□□□□ -0.66
CPSF7-223ENST00000544669 NKX6-1P78426 367 aaPredicted RBP10.95□□□□□ -0.66
CPSF7-223ENST00000544669 TRIP6Q15654 476 aaKnown RBP10.95□□□□□ -0.66
CPSF7-223ENST00000544669 ACOT6Q3I5F7 207 aaPredicted RBP10.95□□□□□ -0.66
CPSF7-223ENST00000544669 OR52E5Q8NH55 327 aa10.95□□□□□ -0.66
CPSF7-223ENST00000544669 FAM210BQ96KR6 192 aa10.95□□□□□ -0.66
CPSF7-223ENST00000544669 GAR1Q9NY12 217 aaKnown RBP10.95□□□□□ -0.66
CPSF7-223ENST00000544669 TINAGQ9UJW2 476 aa10.95□□□□□ -0.66
CPSF7-223ENST00000544669 JPT1Q9UK76 154 aa10.95□□□□□ -0.66
CPSF7-223ENST00000544669 PSPNO60542 156 aa10.94□□□□□ -0.66
CPSF7-223ENST00000544669 KRASP01116 189 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms