RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 C11orf54Q9H0W9 315 aaPredicted RBP12.23□□□□□ -0.45
ECHDC2-223ENST00000542552 ATG5Q9H1Y0 275 aa12.23□□□□□ -0.45
ECHDC2-223ENST00000542552 LIN7CQ9NUP9 197 aaKnown RBP12.23□□□□□ -0.45
ECHDC2-223ENST00000542552 PIPOXQ9P0Z9 390 aa12.23□□□□□ -0.45
ECHDC2-223ENST00000542552 NCBP2LA6PVI3 153 aaKnown RBP12.22□□□□□ -0.45
ECHDC2-223ENST00000542552 RAB29O14966 203 aa12.22□□□□□ -0.45
ECHDC2-223ENST00000542552 DIRAS3O95661 229 aa12.22□□□□□ -0.45
ECHDC2-223ENST00000542552 SNRPBP14678 240 aaKnown RBP12.22□□□□□ -0.45
ECHDC2-223ENST00000542552 F2RL1P55085 397 aa12.22□□□□□ -0.45
ECHDC2-223ENST00000542552 SCAND1P57086 179 aa12.22□□□□□ -0.45
ECHDC2-223ENST00000542552 MXD1Q05195 221 aa12.22□□□□□ -0.45
ECHDC2-223ENST00000542552 ARL6IP1Q15041 203 aa12.22□□□□□ -0.45
ECHDC2-223ENST00000542552 SRSF7Q16629 238 aaKnown RBP eCLIP12.22□□□□□ -0.45
ECHDC2-223ENST00000542552 Q6ZS49 121 aa12.22□□□□□ -0.45
ECHDC2-223ENST00000542552 FAM71E2Q8N5Q1 922 aa12.22□□□□□ -0.45
ECHDC2-223ENST00000542552 LGALS14Q8TCE9 139 aa12.22□□□□□ -0.45
ECHDC2-223ENST00000542552 EDARADDQ8WWZ3 215 aa12.22□□□□□ -0.45
ECHDC2-223ENST00000542552 ABCG5Q9H222 651 aa12.22□□□□□ -0.45
ECHDC2-223ENST00000542552 ELF5Q9UKW6 265 aaPredicted RBP12.22□□□□□ -0.45
ECHDC2-223ENST00000542552 A0A075B6Q4 140 aa12.21□□□□□ -0.45
ECHDC2-223ENST00000542552 FABP7O15540 132 aa12.21□□□□□ -0.45
ECHDC2-223ENST00000542552 HSPA12AO43301 675 aa12.21□□□□□ -0.45
ECHDC2-223ENST00000542552 PROP1O75360 226 aa12.21□□□□□ -0.45
ECHDC2-223ENST00000542552 MRPS15P82914 257 aaKnown RBP12.21□□□□□ -0.45
ECHDC2-223ENST00000542552 KIR2DS1Q14954 304 aa12.21□□□□□ -0.45
ECHDC2-223ENST00000542552 TIMM50Q3ZCQ8 353 aa12.21□□□□□ -0.45
ECHDC2-223ENST00000542552 CDNFQ49AH0 187 aa12.21□□□□□ -0.45
ECHDC2-223ENST00000542552 C10orf99Q6UWK7 81 aa12.21□□□□□ -0.45
ECHDC2-223ENST00000542552 ABHD14BQ96IU4 210 aa12.21□□□□□ -0.45
ECHDC2-223ENST00000542552 RITA1Q96K30 269 aa12.21□□□□□ -0.45
ECHDC2-223ENST00000542552 CABLES2Q9BTV7 478 aa12.21□□□□□ -0.45
ECHDC2-223ENST00000542552 VCX3AQ9NNX9 186 aa12.21□□□□□ -0.45
ECHDC2-223ENST00000542552 TRBV6-7A0A0A0MS04 114 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 LINC01548A6NM66 108 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 TMEM127O75204 238 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 SCGNO76038 276 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 GSTT2P0CG29 244 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 GSTT2BP0CG30 244 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 CT45A6P0DMU7 189 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 CT45A5P0DMU8 189 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 CT45A7P0DMV0 189 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 DTYMKP23919 212 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 GPR12P47775 334 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 SERPINB10P48595 397 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 NSUN5P1Q3KNT7 163 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 RPL39P5Q59GN2 51 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 IGSF11Q5DX21 431 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 HACD4Q5VWC8 232 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 SLC35E3Q7Z769 313 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 OR5H6Q8NGV6 325 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 CHPT1Q8WUD6 406 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 NOL4LQ96MY1 436 aaPredicted RBP12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 RHBDL2Q9NX52 303 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 RDH8Q9NYR8 311 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 ZNF230Q9UIE0 474 aaPredicted RBP12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 ETV7Q9Y603 341 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 DNAH3Q8TD57 4116 aa12.2□□□□□ -0.46
ECHDC2-223ENST00000542552 PSMB11A5LHX3 300 aa12.19□□□□□ -0.46
ECHDC2-223ENST00000542552 AIREO43918 545 aa12.19□□□□□ -0.46
ECHDC2-223ENST00000542552 OPN1MWP04001 364 aa12.19□□□□□ -0.46
ECHDC2-223ENST00000542552 GSTP1P09211 210 aaKnown RBP12.19□□□□□ -0.46
ECHDC2-223ENST00000542552 OPN1MW2P0DN77 364 aa12.19□□□□□ -0.46
ECHDC2-223ENST00000542552 OPN1MW3P0DN78 364 aa12.19□□□□□ -0.46
ECHDC2-223ENST00000542552 TGFBR1P36897 503 aa12.19□□□□□ -0.46
ECHDC2-223ENST00000542552 ARFRP1Q13795 201 aa12.19□□□□□ -0.46
ECHDC2-223ENST00000542552 ZNF260Q3ZCT1 412 aa12.19□□□□□ -0.46
ECHDC2-223ENST00000542552 OR5AN1Q8NGI8 311 aa12.19□□□□□ -0.46
ECHDC2-223ENST00000542552 MAFIPQ8WZ33 124 aa12.19□□□□□ -0.46
ECHDC2-223ENST00000542552 SLC25A38Q96DW6 304 aa12.19□□□□□ -0.46
ECHDC2-223ENST00000542552 RASL11BQ9BPW5 248 aa12.19□□□□□ -0.46
ECHDC2-223ENST00000542552 IGKV1D-8A0A087WSZ0 117 aa12.18□□□□□ -0.46
ECHDC2-223ENST00000542552 TALDO1P37837 337 aa12.18□□□□□ -0.46
ECHDC2-223ENST00000542552 RPS19P39019 145 aaKnown RBP12.18□□□□□ -0.46
ECHDC2-223ENST00000542552 ACTBP60709 375 aa12.18□□□□□ -0.46
ECHDC2-223ENST00000542552 IDNKQ5T6J7 187 aa12.18□□□□□ -0.46
ECHDC2-223ENST00000542552 FAM131AQ6UXB0 335 aa12.18□□□□□ -0.46
ECHDC2-223ENST00000542552 FOXRED2Q8IWF2 684 aa12.18□□□□□ -0.46
ECHDC2-223ENST00000542552 STPG2Q8N412 459 aa12.18□□□□□ -0.46
ECHDC2-223ENST00000542552 NPBQ8NG41 125 aa12.18□□□□□ -0.46
ECHDC2-223ENST00000542552 OR4X2Q8NGF9 303 aa12.18□□□□□ -0.46
ECHDC2-223ENST00000542552 OR10J5Q8NHC4 309 aa12.18□□□□□ -0.46
ECHDC2-223ENST00000542552 PHF21AQ96BD5 680 aa12.18□□□□□ -0.46
ECHDC2-223ENST00000542552 RNF150Q9ULK6 438 aa12.18□□□□□ -0.46
ECHDC2-223ENST00000542552 TSSC4Q9Y5U2 329 aaPredicted RBP12.18□□□□□ -0.46
ECHDC2-223ENST00000542552 PLXNB1O43157 2135 aa12.17□□□□□ -0.46
ECHDC2-223ENST00000542552 PRKDCP78527 4128 aaKnown RBP12.17□□□□□ -0.46
ECHDC2-223ENST00000542552 TCRBV4S1A1TA0A5B7 111 aa12.17□□□□□ -0.46
ECHDC2-223ENST00000542552 OR5H14A6NHG9 310 aa12.17□□□□□ -0.46
ECHDC2-223ENST00000542552 H0YJW9 148 aa12.17□□□□□ -0.46
ECHDC2-223ENST00000542552 AP4M1O00189 453 aa12.17□□□□□ -0.46
ECHDC2-223ENST00000542552 BET1O15155 118 aa12.17□□□□□ -0.46
ECHDC2-223ENST00000542552 KCNAB3O43448 404 aa12.17□□□□□ -0.46
ECHDC2-223ENST00000542552 SSX5O60225 188 aa12.17□□□□□ -0.46
ECHDC2-223ENST00000542552 CNTFRP26992 372 aa12.17□□□□□ -0.46
ECHDC2-223ENST00000542552 MC5RP33032 325 aa12.17□□□□□ -0.46
ECHDC2-223ENST00000542552 SOX6P35712 828 aa12.17□□□□□ -0.46
ECHDC2-223ENST00000542552 PITPNAQ00169 270 aa12.17□□□□□ -0.46
ECHDC2-223ENST00000542552 MMDQ15546 238 aa12.17□□□□□ -0.46
ECHDC2-223ENST00000542552 PNLIPRP3Q17RR3 467 aa12.17□□□□□ -0.46
ECHDC2-223ENST00000542552 ZNF329Q86UD4 541 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms