RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 OR4K17Q8NGC6 315 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 CLHC1Q8NHS4 586 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 LRRC20Q8TCA0 184 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 TWIST2Q8WVJ9 160 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 CACNG8Q8WXS5 425 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 LRRC39Q96DD0 335 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 OLFM3Q96PB7 478 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 TRIB3Q96RU7 358 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 HIGD2AQ9BW72 106 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 RAB1BQ9H0U4 201 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 GOLPH3Q9H4A6 298 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 ZNF443Q9Y2A4 671 aaPredicted RBP1.1□□□□□ -2.23
PRKDC-210ENST00000541488 ZNF706Q9Y5V0 76 aaPredicted RBP1.1□□□□□ -2.23
PRKDC-210ENST00000541488 USH1CQ9Y6N9 552 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 ATAD5Q96QE3 1844 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 LRBAP50851 2863 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 PRRC2BQ5JSZ5 2229 aaKnown RBP1.09□□□□□ -2.23
PRKDC-210ENST00000541488 POLR3AO14802 1390 aaPredicted RBP1.09□□□□□ -2.23
PRKDC-210ENST00000541488 PTPRSQ13332 1948 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 LOC285556D6RIA3 1793 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 ATMQ13315 3056 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 IGHV1-45A0A0A0MS14 117 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 TRAV8-3A0A0A6YYJ7 113 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 IGHV2-26A0A0B4J1V2 119 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 A0A1B0GU33 70 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 A0A1B0GXF2 115 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 RAB19A4D1S5 217 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 MGAT4DA6NG13 374 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 A8MWP4 228 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 I3L4J1 428 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 hCG_2039718K7EN88 272 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 PLPP3O14495 311 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 CRXO43186 299 aaPredicted RBP1.09□□□□□ -2.23
PRKDC-210ENST00000541488 TCF21O43680 179 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 POP7O75817 140 aaKnown RBP1.09□□□□□ -2.23
PRKDC-210ENST00000541488 CDS2O95674 445 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 GPR75O95800 540 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 IGKV1D-33P01593 117 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 IGKV1-33P01594 117 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 APOA1P02647 267 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 LGALS7P47929 136 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 DEFB103AP81534 67 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 DHRS2Q13268 280 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 CASP8Q14790 479 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 TNXAQ16473 311 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 BCL2A1Q16548 175 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 PSG3Q16557 428 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 PYCR3Q53H96 274 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 ACTBL2Q562R1 376 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 HBMQ6B0K9 141 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 LAMTOR1Q6IAA8 161 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 TRIML2Q8N7C3 387 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 OR2K2Q8NGT1 345 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 ZNF75CPQ92670 426 aaPredicted RBP1.09□□□□□ -2.23
PRKDC-210ENST00000541488 FXYD5Q96DB9 178 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 SLC25A44Q96H78 314 aaPredicted RBP1.09□□□□□ -2.23
PRKDC-210ENST00000541488 FMC1Q96HJ9 113 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 ZNF396Q96N95 335 aaPredicted RBP1.09□□□□□ -2.23
PRKDC-210ENST00000541488 APOL4Q9BPW4 351 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 HINT2Q9BX68 163 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 SUCNR1Q9BXA5 334 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 BEX2Q9BXY8 128 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 SLC25A31Q9H0C2 315 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 GABARAPL1Q9H0R8 117 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 XKR8Q9H6D3 395 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 RBM12B-AS1Q9P1G2 102 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 SIP14410 1827 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 PATJQ8NI35 1801 aa1.09□□□□□ -2.23
PRKDC-210ENST00000541488 NBEAL2Q6ZNJ1 2754 aa1.09□□□□□ -2.24
PRKDC-210ENST00000541488 PCLOQ9Y6V0 5065 aa1.09□□□□□ -2.24
PRKDC-210ENST00000541488 OTOGQ6ZRI0 2925 aa1.09□□□□□ -2.24
PRKDC-210ENST00000541488 ANKRD36BQ8N2N9 1353 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 CNOT1A5YKK6 2376 aaKnown RBP1.08□□□□□ -2.24
PRKDC-210ENST00000541488 CEP295Q9C0D2 2601 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 ECM29Q5VYK3 1845 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 EPPK1P58107 5090 aaKnown RBP1.08□□□□□ -2.24
PRKDC-210ENST00000541488 NBEAL1Q6ZS30 2694 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 CCDC168Q8NDH2 2452 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 A0A0B4J2C4 111 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 GOLGA8IPA6NC78 632 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 H3BMM0 161 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 M0QXV9 152 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 ENSAO43768 121 aaKnown RBP1.08□□□□□ -2.24
PRKDC-210ENST00000541488 CA2P00918 260 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 OPN1SWP03999 348 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 CRABP2P29373 138 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 CBX5P45973 191 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 KCNJ3P48549 501 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 TNNC1P63316 161 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 HBG1P69891 147 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 HBG2P69892 147 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 XIAPP98170 497 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 MMDQ15546 238 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 CEACAM21Q3KPI0 293 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 ZCWPW2Q504Y3 356 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 PCOTHQ58A44 107 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 NXNL2Q5VZ03 156 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 MRPL52Q86TS9 123 aaKnown RBP1.08□□□□□ -2.24
PRKDC-210ENST00000541488 SLC25A45Q8N413 288 aa1.08□□□□□ -2.24
PRKDC-210ENST00000541488 Q8NAQ8 132 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms