RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 OR2A5Q96R48 311 aa10.6□□□□□ -0.71
USP3-203ENST00000538686 PMCHL2Q9BQD1 86 aa10.6□□□□□ -0.71
USP3-203ENST00000538686 HDHD3Q9BSH5 251 aaPredicted RBP10.6□□□□□ -0.71
USP3-203ENST00000538686 QTRT1Q9BXR0 403 aaKnown RBP10.6□□□□□ -0.71
USP3-203ENST00000538686 RTN4RQ9BZR6 473 aa10.6□□□□□ -0.71
USP3-203ENST00000538686 A0A0G2JMM0 328 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 A0A1W2PPB8 328 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 KIR3DP1A8MWS1 328 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 CEBPDP49716 269 aaPredicted RBP10.59□□□□□ -0.71
USP3-203ENST00000538686 MLF1P58340 268 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 ARF3P61204 181 aaPredicted RBP10.59□□□□□ -0.71
USP3-203ENST00000538686 ARF1P84077 181 aaKnown RBP10.59□□□□□ -0.71
USP3-203ENST00000538686 HSD52Q0P140 79 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 SMAGPQ0VAQ4 97 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 OR8I2Q8N0Y5 310 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 OR10G9Q8NGN4 311 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 OR10G7Q8NGN6 311 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 SPACA9Q96E40 222 aaPredicted RBP10.59□□□□□ -0.71
USP3-203ENST00000538686 MRAP2Q96G30 205 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 DERL1Q9BUN8 251 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 SLC25A22Q9H936 323 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 NAT8BQ9UHF3 227 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 PPP1R3CQ9UQK1 317 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 LY96Q9Y6Y9 160 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 PLPP3O14495 311 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 TNFSF12O43508 249 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 HLA-DQA1P01909 254 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 PRNPP04156 253 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 NPPCP23582 126 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 GNB1P62873 340 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 RELBQ01201 579 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 TCEA2Q15560 299 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 POM121L1PQ3SYA9 428 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 CYYR1Q96J86 154 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 TAAR6Q96RI8 345 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 NPVFQ9HCQ7 196 aa10.59□□□□□ -0.71
USP3-203ENST00000538686 LRRK1Q38SD2 2015 aa10.58□□□□□ -0.72
USP3-203ENST00000538686 IGKV1-9A0A0C4DH69 117 aa10.58□□□□□ -0.72
USP3-203ENST00000538686 FAM181BA6NEQ2 426 aa10.58□□□□□ -0.72
USP3-203ENST00000538686 C9orf118A6NHY6 69 aa10.58□□□□□ -0.72
USP3-203ENST00000538686 NPIPB13A6NJU9 1138 aa10.58□□□□□ -0.72
USP3-203ENST00000538686 NPIPB4C9JG80 1138 aa10.58□□□□□ -0.72
USP3-203ENST00000538686 H0Y980 276 aa10.58□□□□□ -0.72
USP3-203ENST00000538686 SLC25A17O43808 307 aa10.58□□□□□ -0.72
USP3-203ENST00000538686 CRYGCP07315 174 aa10.58□□□□□ -0.72
USP3-203ENST00000538686 POU2F2P09086 479 aa10.58□□□□□ -0.72
USP3-203ENST00000538686 NPY1RP25929 384 aa10.58□□□□□ -0.72
USP3-203ENST00000538686 CRYBB3P26998 211 aa10.58□□□□□ -0.72
USP3-203ENST00000538686 DAP3P51398 398 aaKnown RBP10.58□□□□□ -0.72
USP3-203ENST00000538686 RAB31Q13636 194 aa10.58□□□□□ -0.72
USP3-203ENST00000538686 CD300EQ496F6 205 aaPredicted RBP10.58□□□□□ -0.72
USP3-203ENST00000538686 ZNF439Q8NDP4 499 aa10.58□□□□□ -0.72
USP3-203ENST00000538686 OR8B12Q8NGG6 310 aa10.58□□□□□ -0.72
USP3-203ENST00000538686 OR2AE1Q8NHA4 323 aa10.58□□□□□ -0.72
USP3-203ENST00000538686 PP6455Q8WZ26 134 aa10.58□□□□□ -0.72
USP3-203ENST00000538686 NEUROG1Q92886 237 aa10.58□□□□□ -0.72
USP3-203ENST00000538686 APOBEC3DQ96AK3 386 aaPredicted RBP10.58□□□□□ -0.72
USP3-203ENST00000538686 C10orf35Q96D05 121 aa10.58□□□□□ -0.72
USP3-203ENST00000538686 GTSF1LQ9H1H1 148 aa10.58□□□□□ -0.72
USP3-203ENST00000538686 PSENENQ9NZ42 101 aa10.58□□□□□ -0.72
USP3-203ENST00000538686 JKAMPQ9P055 326 aa10.58□□□□□ -0.72
USP3-203ENST00000538686 PSMB11A5LHX3 300 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 TMEM189A5PLL7 270 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 H3BP45 60 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 H3BRM9 83 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 IGKV1D-33P01593 117 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 IGKV1-33P01594 117 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 SRFP11831 508 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 C1QL2Q7Z5L3 287 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 RCHY1Q96PM5 261 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 NPFFR1Q9GZQ6 430 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 FBRSQ9HAH7 460 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 HS3ST3A1Q9Y663 406 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 SCN10AQ9Y5Y9 1956 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 SYNGR2O43760 224 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 NDUFB4O95168 129 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 FTH1P19P0C7X4 201 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 Q56UQ5 140 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 FAM162BQ5T6X4 162 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 LCN12Q6JVE5 192 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 OR4C12Q96R67 309 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 MS4A6AQ9H2W1 248 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 IL36GQ9NZH8 169 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 LHFPL6Q9Y693 200 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 CPAMD8Q8IZJ3 1885 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 FREM3P0C091 2139 aa10.57□□□□□ -0.72
USP3-203ENST00000538686 OBSL1O75147 1896 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 FAM231BA6NCW3 169 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 A6NDN8 102 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 OR11H12B2RN74 326 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 ZNF17P17021 662 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 NTF3P20783 257 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 TMEM52BQ4KMG9 183 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 WDR74Q6RFH5 385 aaPredicted RBP10.56□□□□□ -0.72
USP3-203ENST00000538686 FA2HQ7L5A8 372 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 ZNF295-AS1Q8N0V1 137 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 ST6GALNAC3Q8NDV1 305 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 TMEM52Q8NDY8 209 aa10.56□□□□□ -0.72
USP3-203ENST00000538686 OR11H1Q8NG94 326 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms