RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 EFNA2O43921 213 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 FAM90A13PP0C7W8 464 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 FAM90A24PP0C7X0 464 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 IRF2P14316 349 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 DRD1P21728 446 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 CD82P27701 267 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 FUT6P51993 359 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 TEX43Q6ZNM6 134 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 CPEB3Q8NE35 698 aaKnown RBP7.71□□□□□ -1.18
SNHG1-209ENST00000538654 NAT6Q93015 286 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 DIRC2Q96SL1 478 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 ELOVL1Q9BW60 279 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 OR2J1Q9GZK6 312 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 TMEM106BQ9NUM4 274 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 KLRF1Q9NZS2 232 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 ZNF581Q9P0T4 197 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 SLC25A10Q9UBX3 287 aaPredicted RBP7.71□□□□□ -1.18
SNHG1-209ENST00000538654 ZFP30Q9Y2G7 519 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 RP1P56715 2156 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 IGKV1-27A0A075B6S5 117 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 KIR2DS1A0A191URI9 304 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 A0A1B0GW15 77 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 A6NNC1 897 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 NRASP01111 189 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 CFIP05156 583 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 UMODP07911 640 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 IL6RP08887 468 aaPredicted RBP7.71□□□□□ -1.18
SNHG1-209ENST00000538654 KIR2DS4P43632 304 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 CLDN17P56750 224 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 PPP1CBP62140 327 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 KIR2DS1Q14954 304 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 RSPO1Q2MKA7 263 aaPredicted RBP7.71□□□□□ -1.18
SNHG1-209ENST00000538654 DMRTA1Q5VZB9 504 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 SSX7Q7RTT5 188 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 WDYHV1Q96HA8 205 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 WDR61Q9GZS3 305 aaKnown RBP7.71□□□□□ -1.18
SNHG1-209ENST00000538654 PLEK2Q9NYT0 353 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 PSENENQ9NZ42 101 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 PXMP4Q9Y6I8 212 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 SHANK1Q9Y566 2161 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 IGLV3-32A0A0A0MS00 114 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 LRP5LA4QPB2 252 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 SLC22A20A6NK97 555 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 SHISA8B8ZZ34 492 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 C5orf67F2Z3F1 127 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 H3BP45 60 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 SYNGR2O43760 224 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 NXPH3O95157 252 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 SERPINE2P07093 398 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 RPL15P61313 204 aaKnown RBP7.7□□□□□ -1.18
SNHG1-209ENST00000538654 INO80CQ6PI98 192 aaPredicted RBP7.7□□□□□ -1.18
SNHG1-209ENST00000538654 FAM180AQ6UWF9 173 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 TOMM20LQ6UXN7 152 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 C19orf35Q6ZS72 473 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 CMTM2Q8TAZ6 248 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 NEK7Q8TDX7 302 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 HEYLQ9NQ87 328 aaPredicted RBP7.7□□□□□ -1.18
SNHG1-209ENST00000538654 NCOA6Q14686 2063 aaPredicted RBP7.7□□□□□ -1.18
SNHG1-209ENST00000538654 CTXND1A0A1B0GTU2 59 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 OR7C1O76099 320 aaPredicted RBP7.7□□□□□ -1.18
SNHG1-209ENST00000538654 F2RP25116 425 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 IL3RAP26951 378 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 FOXL1Q12952 345 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 RTP5Q14D33 572 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 SNAI3Q3KNW1 292 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 TMEM42Q69YG0 159 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 OR4F5Q8NH21 305 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 RNF138Q8WVD3 245 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 TMEM54Q969K7 222 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 LSM10Q969L4 123 aaKnown RBP7.7□□□□□ -1.18
SNHG1-209ENST00000538654 GPR146Q96CH1 333 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 SDSLQ96GA7 329 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 OR4F4Q96R69 305 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 VAMP8Q9BV40 100 aa7.7□□□□□ -1.18
SNHG1-209ENST00000538654 MTIF3Q9H2K0 278 aaKnown RBP7.7□□□□□ -1.18
SNHG1-209ENST00000538654 IGKV1-12A0A0C4DH73 117 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 A0A1W2PNR3 127 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 ZNF561-AS1K7EIQ3 104 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 SIAH2O43255 324 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 PGLYRP1O75594 196 aaPredicted RBP7.69□□□□□ -1.18
SNHG1-209ENST00000538654 IGKV1D-12P01611 117 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 WNT2P09544 360 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 ARL4DP49703 201 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 GFERP55789 205 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 CLDN15P56746 228 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 OR5I1Q13606 314 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 NUFIP2Q7Z417 695 aaKnown RBP7.69□□□□□ -1.18
SNHG1-209ENST00000538654 DTX1Q86Y01 620 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 BOD1L2Q8IYS8 172 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 FAM110DQ8TAY7 271 aaPredicted RBP7.69□□□□□ -1.18
SNHG1-209ENST00000538654 TAF15Q92804 592 aaKnown RBP eCLIP7.69□□□□□ -1.18
SNHG1-209ENST00000538654 EXTL1Q92935 676 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 CD300LBA8K4G0 201 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 KIAA1324LA8MWY0 1029 aaPredicted RBP7.69□□□□□ -1.18
SNHG1-209ENST00000538654 H3BMH7 237 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 CLEC12BQ2HXU8 276 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 FAM78BQ5VT40 261 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 FBXW9Q5XUX1 488 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 Q6ZPA2 131 aa7.69□□□□□ -1.18
SNHG1-209ENST00000538654 TMEM144Q7Z5S9 345 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms