RNA–Protein interactions for RNA: ENST00000536515.5

LGR5-202, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-202ENST00000536515 OR2B11Q5JQS5 317 aa11.04□□□□□ -0.64
LGR5-202ENST00000536515 OR8G2PQ6IF36 304 aa11.04□□□□□ -0.64
LGR5-202ENST00000536515 FAM53AQ6NSI3 398 aaPredicted RBP11.04□□□□□ -0.64
LGR5-202ENST00000536515 SPNS3Q6ZMD2 512 aa11.04□□□□□ -0.64
LGR5-202ENST00000536515 FGFRL1Q8N441 504 aa11.04□□□□□ -0.64
LGR5-202ENST00000536515 GGACTQ9BVM4 153 aa11.04□□□□□ -0.64
LGR5-202ENST00000536515 POLDIP2Q9Y2S7 368 aa11.04□□□□□ -0.64
LGR5-202ENST00000536515 UBE2L5PA0A1B0GUS4 154 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 CEBPZOSA8MTT3 80 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 KLRC4-KLRK1H3BQV0 150 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 HIST1H2BKO60814 126 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 SMPD2O60906 423 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 HIST1H2BJP06899 126 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 HIST1H2BOP23527 126 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 HIST1H2BBP33778 126 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 CDX1P47902 265 aaPredicted RBP11.03□□□□□ -0.64
LGR5-202ENST00000536515 HIST1H2BDP58876 126 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 HIST1H2BCP62807 126 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 HIST2H2BEQ16778 126 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.03□□□□□ -0.64
LGR5-202ENST00000536515 CA5BP1Q8WTZ4 195 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 HIST1H2BHQ93079 126 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 HIST1H2BNQ99877 126 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 HIST1H2BMQ99879 126 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 WDR61Q9GZS3 305 aaKnown RBP11.03□□□□□ -0.64
LGR5-202ENST00000536515 EP300Q09472 2414 aaPredicted RBP11.03□□□□□ -0.64
LGR5-202ENST00000536515 SH2D1BO14796 132 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 CLDN1O95832 211 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 HOXA4Q00056 320 aaPredicted RBP11.03□□□□□ -0.64
LGR5-202ENST00000536515 BEND4Q6ZU67 534 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 Q8IYB0 196 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 MDS2Q8NDY4 140 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 EDARADDQ8WWZ3 215 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 WDYHV1Q96HA8 205 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 MBNL3Q9NUK0 354 aaKnown RBP11.03□□□□□ -0.64
LGR5-202ENST00000536515 SPRR3Q9UBC9 169 aa11.03□□□□□ -0.64
LGR5-202ENST00000536515 MAP1LC3B2A6NCE7 125 aa11.02□□□□□ -0.64
LGR5-202ENST00000536515 RAMP3O60896 148 aa11.02□□□□□ -0.64
LGR5-202ENST00000536515 PGA5P0DJD9 388 aa11.02□□□□□ -0.64
LGR5-202ENST00000536515 SERF2P84101 59 aa11.02□□□□□ -0.64
LGR5-202ENST00000536515 TLE1Q04724 770 aa11.02□□□□□ -0.64
LGR5-202ENST00000536515 SLC38A11Q08AI6 406 aa11.02□□□□□ -0.64
LGR5-202ENST00000536515 TMEM41BQ5BJD5 291 aa11.02□□□□□ -0.64
LGR5-202ENST00000536515 RNFT1Q5M7Z0 435 aa11.02□□□□□ -0.64
LGR5-202ENST00000536515 DEFB124Q8NES8 71 aa11.02□□□□□ -0.64
LGR5-202ENST00000536515 OR1L1Q8NH94 360 aa11.02□□□□□ -0.64
LGR5-202ENST00000536515 MAP1LC3BQ9GZQ8 125 aa11.02□□□□□ -0.64
LGR5-202ENST00000536515 CDH20Q9HBT6 801 aa11.02□□□□□ -0.64
LGR5-202ENST00000536515 DOCK11Q5JSL3 2073 aa11.02□□□□□ -0.65
LGR5-202ENST00000536515 B4DEV8 164 aa11.02□□□□□ -0.65
LGR5-202ENST00000536515 KRASP01116 189 aa11.02□□□□□ -0.65
LGR5-202ENST00000536515 ZNF146Q15072 292 aa11.02□□□□□ -0.65
LGR5-202ENST00000536515 ATP1A1-AS1Q5TC04 95 aa11.02□□□□□ -0.65
LGR5-202ENST00000536515 ZNF808Q8N4W9 903 aaPredicted RBP11.02□□□□□ -0.65
LGR5-202ENST00000536515 SLC25A40Q8TBP6 338 aa11.02□□□□□ -0.65
LGR5-202ENST00000536515 TAF15Q92804 592 aaKnown RBP eCLIP11.02□□□□□ -0.657e-7■■■■□ 23.1
LGR5-202ENST00000536515 RBKSQ9H477 322 aa11.02□□□□□ -0.65
LGR5-202ENST00000536515 WIPI2Q9Y4P8 454 aa11.02□□□□□ -0.65
LGR5-202ENST00000536515 ZFHX2Q9C0A1 2572 aaPredicted RBP11.02□□□□□ -0.65
LGR5-202ENST00000536515 TRBV23-1A0A0A0MS06 115 aa11.02□□□□□ -0.65
LGR5-202ENST00000536515 PSPNO60542 156 aa11.02□□□□□ -0.65
LGR5-202ENST00000536515 IGHV2-70P01814 119 aa11.02□□□□□ -0.65
LGR5-202ENST00000536515 RD3LP0DJH9 198 aa11.02□□□□□ -0.65
LGR5-202ENST00000536515 OR3A1P47881 315 aa11.02□□□□□ -0.65
LGR5-202ENST00000536515 TNFRSF9Q07011 255 aa11.02□□□□□ -0.65
LGR5-202ENST00000536515 ZNF816Q0VGE8 651 aaPredicted RBP11.02□□□□□ -0.65
LGR5-202ENST00000536515 GFI1BQ5VTD9 330 aa11.02□□□□□ -0.65
LGR5-202ENST00000536515 CXorf67Q86X51 503 aaPredicted RBP11.02□□□□□ -0.65
LGR5-202ENST00000536515 FAM210BQ96KR6 192 aa11.02□□□□□ -0.65
LGR5-202ENST00000536515 SSX3Q99909 188 aa11.02□□□□□ -0.65
LGR5-202ENST00000536515 VAX2Q9UIW0 290 aa11.02□□□□□ -0.65
LGR5-202ENST00000536515 TRGV5A0A0B4J1U4 118 aa11.01□□□□□ -0.65
LGR5-202ENST00000536515 HMGB3O15347 200 aaKnown RBP11.01□□□□□ -0.65
LGR5-202ENST00000536515 HAND1O96004 215 aa11.01□□□□□ -0.65
LGR5-202ENST00000536515 IGKV1D-33P01593 117 aa11.01□□□□□ -0.65
LGR5-202ENST00000536515 IGKV1-33P01594 117 aa11.01□□□□□ -0.65
LGR5-202ENST00000536515 CD55P08174 381 aa11.01□□□□□ -0.65
LGR5-202ENST00000536515 S100A2P29034 98 aa11.01□□□□□ -0.65
LGR5-202ENST00000536515 G6PCP35575 357 aa11.01□□□□□ -0.65
LGR5-202ENST00000536515 PNRC1Q12796 327 aaPredicted RBP11.01□□□□□ -0.65
LGR5-202ENST00000536515 PDZD11Q5EBL8 140 aa11.01□□□□□ -0.65
LGR5-202ENST00000536515 PYY3Q5JQD4 70 aa11.01□□□□□ -0.65
LGR5-202ENST00000536515 MRGPRGQ86SM5 289 aa11.01□□□□□ -0.65
LGR5-202ENST00000536515 OR2D2Q9H210 308 aa11.01□□□□□ -0.65
LGR5-202ENST00000536515 SDF2L1Q9HCN8 221 aa11.01□□□□□ -0.65
LGR5-202ENST00000536515 GAR1Q9NY12 217 aaKnown RBP11.01□□□□□ -0.65
LGR5-202ENST00000536515 PRR14LQ5THK1 2151 aa11.01□□□□□ -0.65
LGR5-202ENST00000536515 RNF212BA8MTL3 300 aa11.01□□□□□ -0.65
LGR5-202ENST00000536515 CLDN34H7C241 214 aa11.01□□□□□ -0.65
LGR5-202ENST00000536515 WNT9BO14905 357 aa11.01□□□□□ -0.65
LGR5-202ENST00000536515 LYZL6O75951 148 aa11.01□□□□□ -0.65
LGR5-202ENST00000536515 CYB5R3P00387 301 aaPredicted RBP11.01□□□□□ -0.65
LGR5-202ENST00000536515 TFF1P04155 84 aa11.01□□□□□ -0.65
LGR5-202ENST00000536515 CD46P15529 392 aa11.01□□□□□ -0.65
LGR5-202ENST00000536515 UBE2NP61088 152 aaKnown RBP11.01□□□□□ -0.65
LGR5-202ENST00000536515 RPL30P62888 115 aaKnown RBP11.01□□□□□ -0.65
LGR5-202ENST00000536515 PSG7Q13046 419 aa11.01□□□□□ -0.65
LGR5-202ENST00000536515 MRPL49Q13405 166 aaKnown RBP11.01□□□□□ -0.65
LGR5-202ENST00000536515 FAM209BQ5JX69 171 aa11.01□□□□□ -0.65
LGR5-202ENST00000536515 ZNF826PQ6ZT77 177 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms