RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 IGKV1-33P01594 117 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 IGHG2P01859 326 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 LPLP06858 475 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 IGHV3-43DP0DP04 118 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 TMEM11P17152 192 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 GADD45AP24522 165 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 CD40LGP29965 261 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 KRTAP10-11P60412 298 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 VBP1P61758 197 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 P2RY14Q15391 338 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 NKAPLQ5M9Q1 402 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 FAM71F2Q6NXP2 309 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 C10orf99Q6UWK7 81 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 ODF3L1Q8IXM7 274 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 OR56B1Q8NGI3 324 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 OR2T10Q8NGZ9 312 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 PPP1R14BQ96C90 147 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 RCC1LQ96I51 464 aaKnown RBP9.84□□□□□ -0.83
PRKDC-207ENST00000536483 SLIRPQ9GZT3 109 aaKnown RBP9.84□□□□□ -0.83
PRKDC-207ENST00000536483 KCNK15Q9H427 330 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 ZNF580Q9UK33 172 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 SSR3Q9UNL2 185 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 COL7A1Q02388 2944 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 SH2D7A6NKC9 451 aaPredicted RBP9.83□□□□□ -0.84
PRKDC-207ENST00000536483 DIRAS3O95661 229 aa9.83□□□□□ -0.84
PRKDC-207ENST00000536483 RAB6AP20340 208 aa9.83□□□□□ -0.84
PRKDC-207ENST00000536483 NCS1P62166 190 aa9.83□□□□□ -0.84
PRKDC-207ENST00000536483 ZNF45Q02386 682 aa9.83□□□□□ -0.84
PRKDC-207ENST00000536483 PLAC9Q5JTB6 97 aa9.83□□□□□ -0.84
PRKDC-207ENST00000536483 ZNF833PQ6ZTB9 187 aa9.83□□□□□ -0.84
PRKDC-207ENST00000536483 MOB3BQ86TA1 216 aa9.83□□□□□ -0.84
PRKDC-207ENST00000536483 OR52L2PQ8NGH6 319 aa9.83□□□□□ -0.84
PRKDC-207ENST00000536483 MCFD2Q8NI22 146 aa9.83□□□□□ -0.84
PRKDC-207ENST00000536483 AGMATQ9BSE5 352 aa9.83□□□□□ -0.84
PRKDC-207ENST00000536483 ABHD14AQ9BUJ0 271 aa9.83□□□□□ -0.84
PRKDC-207ENST00000536483 TOLLIPQ9H0E2 274 aa9.83□□□□□ -0.84
PRKDC-207ENST00000536483 AKIP1Q9NQ31 210 aa9.83□□□□□ -0.84
PRKDC-207ENST00000536483 LIN7CQ9NUP9 197 aaKnown RBP9.83□□□□□ -0.84
PRKDC-207ENST00000536483 ABRACLQ9P1F3 81 aa9.83□□□□□ -0.84
PRKDC-207ENST00000536483 TMEM272A0A1B0GTI8 110 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 RAB27BO00194 218 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 MOSP00540 346 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 RAB3BP20337 219 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 HOXD3P31249 432 aaPredicted RBP9.82□□□□□ -0.84
PRKDC-207ENST00000536483 S100A5P33763 92 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 PPP1CCP36873 323 aaKnown RBP9.82□□□□□ -0.84
PRKDC-207ENST00000536483 ETV6P41212 452 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 REG1BP48304 166 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 CLDN12P56749 244 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 GNMTQ14749 295 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 SRSF7Q16629 238 aaKnown RBP eCLIP9.82□□□□□ -0.84
PRKDC-207ENST00000536483 KHDC1LQ5JSQ8 128 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 TPRA1Q86W33 373 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 NR2C2APQ86WQ0 139 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 PRR18Q8N4B5 295 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 FAM71E2Q8N5Q1 922 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 Q8N9W7 124 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 OR4X2Q8NGF9 303 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 OR10V1Q8NGI7 309 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 ARHGAP5-AS1Q96IT6 56 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 ZNF251Q9BRH9 671 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 PECRQ9BY49 303 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 ABCG5Q9H222 651 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 Q9N2K0 584 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 C12orf4Q9NQ89 552 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 AK3Q9UIJ7 227 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 KCNK7Q9Y2U2 307 aa9.82□□□□□ -0.84
PRKDC-207ENST00000536483 DUS4LO95620 317 aaKnown RBP9.81□□□□□ -0.84
PRKDC-207ENST00000536483 MYL9P24844 172 aa9.81□□□□□ -0.84
PRKDC-207ENST00000536483 VEGFCP49767 419 aa9.81□□□□□ -0.84
PRKDC-207ENST00000536483 RORCP51449 518 aa9.81□□□□□ -0.84
PRKDC-207ENST00000536483 PPP5CP53041 499 aa9.81□□□□□ -0.84
PRKDC-207ENST00000536483 OR10A3P58181 314 aa9.81□□□□□ -0.84
PRKDC-207ENST00000536483 HES1Q14469 280 aa9.81□□□□□ -0.84
PRKDC-207ENST00000536483 Q6ZS49 121 aa9.81□□□□□ -0.84
PRKDC-207ENST00000536483 C5orf24Q7Z6I8 188 aa9.81□□□□□ -0.84
PRKDC-207ENST00000536483 CHPT1Q8WUD6 406 aa9.81□□□□□ -0.84
PRKDC-207ENST00000536483 NABP2Q9BQ15 211 aa9.81□□□□□ -0.84
PRKDC-207ENST00000536483 OR51E2Q9H255 320 aa9.81□□□□□ -0.84
PRKDC-207ENST00000536483 IFI27L2Q9H2X8 130 aa9.81□□□□□ -0.84
PRKDC-207ENST00000536483 TXNL4BQ9NX01 149 aaKnown RBP9.81□□□□□ -0.84
PRKDC-207ENST00000536483 PIPOXQ9P0Z9 390 aa9.81□□□□□ -0.84
PRKDC-207ENST00000536483 SLC23A1Q9UHI7 598 aa9.81□□□□□ -0.84
PRKDC-207ENST00000536483 LOC100506127A0A0U1RQW1 187 aa9.8□□□□□ -0.84
PRKDC-207ENST00000536483 NOTOA8MTQ0 251 aa9.8□□□□□ -0.84
PRKDC-207ENST00000536483 ZNF736B4DX44 427 aaPredicted RBP9.8□□□□□ -0.84
PRKDC-207ENST00000536483 LSM3P62310 102 aaKnown RBP9.8□□□□□ -0.84
PRKDC-207ENST00000536483 HLA-DRB3P79483 266 aa9.8□□□□□ -0.84
PRKDC-207ENST00000536483 EGFEM1PQ0D2K5 195 aa9.8□□□□□ -0.84
PRKDC-207ENST00000536483 PLA2G7Q13093 441 aa9.8□□□□□ -0.84
PRKDC-207ENST00000536483 HNF4GQ14541 408 aa9.8□□□□□ -0.84
PRKDC-207ENST00000536483 C9orf152Q5JTZ5 239 aa9.8□□□□□ -0.84
PRKDC-207ENST00000536483 HES5Q5TA89 166 aa9.8□□□□□ -0.84
PRKDC-207ENST00000536483 C22orf42Q6IC83 251 aa9.8□□□□□ -0.84
PRKDC-207ENST00000536483 Q6ZNX1 250 aa9.8□□□□□ -0.84
PRKDC-207ENST00000536483 COMMD1Q8N668 190 aa9.8□□□□□ -0.84
PRKDC-207ENST00000536483 LINC00482Q8N8I6 264 aa9.8□□□□□ -0.84
PRKDC-207ENST00000536483 RNF152Q8N8N0 203 aa9.8□□□□□ -0.84
PRKDC-207ENST00000536483 OR2AK2Q8NG84 335 aa9.8□□□□□ -0.84
PRKDC-207ENST00000536483 OR10R2Q8NGX6 335 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 736.8 ms