RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 CTXN2P0C2S0 81 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 PSMB8P28062 276 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 FGF9P31371 208 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-217ENST00000534699 MRPS15P82914 257 aaKnown RBP8.17□□□□□ -1.1
CSDE1-217ENST00000534699 DIAPH2-AS1Q14236 149 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 MSMO1Q15800 293 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 UBE2UQ5VVX9 321 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 LIPKQ5VXJ0 399 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 MRPL41Q8IXM3 137 aaKnown RBP8.17□□□□□ -1.1
CSDE1-217ENST00000534699 MRAPQ8TCY5 172 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 NRG4Q8WWG1 115 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 FAM3DQ96BQ1 224 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 SLC31A2O15432 143 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 DENRO43583 198 aaKnown RBP8.16□□□□□ -1.1
CSDE1-217ENST00000534699 IGLV1-40P01703 118 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 OR8U8P0C7N1 319 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 PITPNAQ00169 270 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 NKAPLQ5M9Q1 402 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 UTF1Q5T230 341 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 OR52L2PQ8NGH6 319 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 FAAP24Q9BTP7 215 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 PECRQ9BY49 303 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 ZNF581Q9P0T4 197 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 ZNF221Q9UK13 617 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 IGHV3-43A0A0B4J1X8 118 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 TRAV39A0A0B4J263 110 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 NUDT19A8MXV4 375 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 CD3GP09693 182 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 IGHV3-43DP0DP04 118 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 DTYMKP23919 212 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 PPIFP30405 207 aaKnown RBP8.16□□□□□ -1.1
CSDE1-217ENST00000534699 LGALS7P47929 136 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 DGCR2P98153 550 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 CBX3Q13185 183 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 FHL3Q13643 280 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 LIN54Q6MZP7 749 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 MINDY2Q8NBR6 621 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 CMSS1Q9BQ75 279 aaKnown RBP8.16□□□□□ -1.1
CSDE1-217ENST00000534699 CCDC90BQ9GZT6 254 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 VSIG4Q9Y279 399 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 PNMA8CA0A1B0GUJ8 204 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 CCL24O00175 119 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 RRHO14718 337 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 APOA2P02652 100 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 NHLRC4P0CG21 123 aaPredicted RBP8.16□□□□□ -1.1
CSDE1-217ENST00000534699 ACTBP60709 375 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 C19orf54Q5BKX5 351 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 C6orf201Q7Z4U5 140 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 KLHL30-AS1Q8NEE0 82 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 KCTD7Q96MP8 289 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 SLA2Q9H6Q3 261 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 AK3Q9UIJ7 227 aa8.16□□□□□ -1.1
CSDE1-217ENST00000534699 SAA2-SAA4A0A096LPE2 208 aa8.15□□□□□ -1.1
CSDE1-217ENST00000534699 A0A0A6YYH2 397 aa8.15□□□□□ -1.1
CSDE1-217ENST00000534699 A0A1W2PPE3 182 aa8.15□□□□□ -1.1
CSDE1-217ENST00000534699 A6NJ64 397 aa8.15□□□□□ -1.1
CSDE1-217ENST00000534699 SAA2P0DJI9 122 aaPredicted RBP8.15□□□□□ -1.1
CSDE1-217ENST00000534699 RPS25P62851 125 aaKnown RBP8.15□□□□□ -1.1
CSDE1-217ENST00000534699 HNF4GQ14541 408 aa8.15□□□□□ -1.1
CSDE1-217ENST00000534699 MMDQ15546 238 aa8.15□□□□□ -1.1
CSDE1-217ENST00000534699 C2orf76Q3KRA6 126 aa8.15□□□□□ -1.1
CSDE1-217ENST00000534699 AKIRIN2Q53H80 203 aa8.15□□□□□ -1.1
CSDE1-217ENST00000534699 TMEM65Q6PI78 240 aa8.15□□□□□ -1.1
CSDE1-217ENST00000534699 Q6ZPA2 131 aa8.15□□□□□ -1.1
CSDE1-217ENST00000534699 OR10V1Q8NGI7 309 aa8.15□□□□□ -1.1
CSDE1-217ENST00000534699 MRPL20Q9BYC9 149 aaKnown RBP8.15□□□□□ -1.1
CSDE1-217ENST00000534699 MGAM2Q2M2H8 2515 aa8.15□□□□□ -1.1
CSDE1-217ENST00000534699 CREBL2O60519 120 aaPredicted RBP8.15□□□□□ -1.11
CSDE1-217ENST00000534699 PPP1CCP36873 323 aaKnown RBP8.15□□□□□ -1.11
CSDE1-217ENST00000534699 FABP5Q01469 135 aa8.15□□□□□ -1.11
CSDE1-217ENST00000534699 GFI1Q99684 422 aa8.15□□□□□ -1.11
CSDE1-217ENST00000534699 AGMATQ9BSE5 352 aa8.15□□□□□ -1.11
CSDE1-217ENST00000534699 DCSTAMPQ9H295 470 aa8.15□□□□□ -1.11
CSDE1-217ENST00000534699 NBEAL1Q6ZS30 2694 aa8.14□□□□□ -1.11
CSDE1-217ENST00000534699 A0A0A6YYD4 124 aa8.14□□□□□ -1.11
CSDE1-217ENST00000534699 TRAV41A0A0B4J266 112 aa8.14□□□□□ -1.11
CSDE1-217ENST00000534699 IFITM5A6NNB3 132 aa8.14□□□□□ -1.11
CSDE1-217ENST00000534699 H0YJW9 148 aa8.14□□□□□ -1.11
CSDE1-217ENST00000534699 TFAP2AP05549 437 aa8.14□□□□□ -1.11
CSDE1-217ENST00000534699 GSTP1P09211 210 aaKnown RBP8.14□□□□□ -1.11
CSDE1-217ENST00000534699 IGLL1P15814 213 aa8.14□□□□□ -1.11
CSDE1-217ENST00000534699 RAB3BP20337 219 aa8.14□□□□□ -1.11
CSDE1-217ENST00000534699 CD40LGP29965 261 aa8.14□□□□□ -1.11
CSDE1-217ENST00000534699 REG1BP48304 166 aa8.14□□□□□ -1.11
CSDE1-217ENST00000534699 OXLD1Q5BKU9 147 aa8.14□□□□□ -1.11
CSDE1-217ENST00000534699 KHDC1LQ5JSQ8 128 aa8.14□□□□□ -1.11
CSDE1-217ENST00000534699 IZUMO2Q6UXV1 221 aa8.14□□□□□ -1.11
CSDE1-217ENST00000534699 ZNF562Q6V9R5 426 aa8.14□□□□□ -1.11
CSDE1-217ENST00000534699 CROCCP3Q8IVE0 287 aa8.14□□□□□ -1.11
CSDE1-217ENST00000534699 ZNF491Q8N8L2 437 aa8.14□□□□□ -1.11
CSDE1-217ENST00000534699 OR10R2Q8NGX6 335 aa8.14□□□□□ -1.11
CSDE1-217ENST00000534699 RAB3CQ96E17 227 aa8.14□□□□□ -1.11
CSDE1-217ENST00000534699 FOXA2Q9Y261 457 aaPredicted RBP8.14□□□□□ -1.11
CSDE1-217ENST00000534699 CALRP27797 417 aaKnown RBP8.14□□□□□ -1.11
CSDE1-217ENST00000534699 TMEM50BP56557 158 aa8.14□□□□□ -1.11
CSDE1-217ENST00000534699 FAM27D1Q5T7N8 215 aa8.14□□□□□ -1.11
CSDE1-217ENST00000534699 C1QL4Q86Z23 238 aa8.14□□□□□ -1.11
CSDE1-217ENST00000534699 C11orf54Q9H0W9 315 aaPredicted RBP8.14□□□□□ -1.11
CSDE1-217ENST00000534699 AK6Q9Y3D8 172 aaKnown RBP8.14□□□□□ -1.11
CSDE1-217ENST00000534699 NUBP2Q9Y5Y2 271 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms