RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 PTTG2Q9NZH5 202 aa7.58□□□□□ -1.2
CSDE1-215ENST00000533818 ENOPH1Q9UHY7 261 aa7.58□□□□□ -1.2
CSDE1-215ENST00000533818 V9GYQ6 96 aa7.58□□□□□ -1.2
CSDE1-215ENST00000533818 ELOA3CA0A087WX78 387 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-215ENST00000533818 NBDYA0A0U1RRE5 68 aa7.57□□□□□ -1.2
CSDE1-215ENST00000533818 BBIP1A8MTZ0 92 aa7.57□□□□□ -1.2
CSDE1-215ENST00000533818 A8MWP6 167 aa7.57□□□□□ -1.2
CSDE1-215ENST00000533818 SULT1B1O43704 296 aa7.57□□□□□ -1.2
CSDE1-215ENST00000533818 RPP14O95059 124 aaKnown RBP7.57□□□□□ -1.2
CSDE1-215ENST00000533818 HBZP02008 142 aa7.57□□□□□ -1.2
CSDE1-215ENST00000533818 MT-ND4P03905 459 aa7.57□□□□□ -1.2
CSDE1-215ENST00000533818 MC5RP33032 325 aa7.57□□□□□ -1.2
CSDE1-215ENST00000533818 SSBP2P81877 361 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-215ENST00000533818 ALKBH1Q13686 389 aaKnown RBP7.57□□□□□ -1.2
CSDE1-215ENST00000533818 IL13RA2Q14627 380 aa7.57□□□□□ -1.2
CSDE1-215ENST00000533818 ZNF585BQ52M93 769 aa7.57□□□□□ -1.2
CSDE1-215ENST00000533818 GLDNQ6ZMI3 551 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-215ENST00000533818 C5orf24Q7Z6I8 188 aa7.57□□□□□ -1.2
CSDE1-215ENST00000533818 SERPINA12Q8IW75 414 aa7.57□□□□□ -1.2
CSDE1-215ENST00000533818 AQP11Q8NBQ7 271 aa7.57□□□□□ -1.2
CSDE1-215ENST00000533818 BBS1Q8NFJ9 593 aa7.57□□□□□ -1.2
CSDE1-215ENST00000533818 OR1L1Q8NH94 360 aa7.57□□□□□ -1.2
CSDE1-215ENST00000533818 MARC2Q969Z3 335 aa7.57□□□□□ -1.2
CSDE1-215ENST00000533818 FAM46BQ96A09 425 aa7.57□□□□□ -1.2
CSDE1-215ENST00000533818 C5orf66Q9H5L9 145 aa7.57□□□□□ -1.2
CSDE1-215ENST00000533818 OR2S2Q9NQN1 319 aa7.57□□□□□ -1.2
CSDE1-215ENST00000533818 ZNF581Q9P0T4 197 aa7.57□□□□□ -1.2
CSDE1-215ENST00000533818 SAMD4AQ9UPU9 718 aaKnown RBP7.57□□□□□ -1.2
CSDE1-215ENST00000533818 SAA2-SAA4A0A096LPE2 208 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 OR5H14A6NHG9 310 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 AIPO00170 330 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 TSPAN4O14817 238 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 PRH1P02810 166 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 SAA2P0DJI9 122 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-215ENST00000533818 CT45A6P0DMU7 189 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 CT45A5P0DMU8 189 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 CT45A7P0DMV0 189 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 MIFP14174 115 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 EPHA2P29317 976 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 CXCR4P61073 352 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 PJVKQ0ZLH3 352 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 RIPK1Q13546 671 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 ZNF124Q15973 351 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 PIGYQ3MUY2 71 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 FAM209BQ5JX69 171 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 ELP2Q6IA86 826 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 TEX47Q8TBZ9 253 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 TMEM163Q8TC26 289 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 FGGYQ96C11 551 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 TSNAXQ99598 290 aaKnown RBP7.56□□□□□ -1.2
CSDE1-215ENST00000533818 NICN1Q9BSH3 213 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 KRTAP3-3Q9BYR6 98 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 KRTAP3-2Q9BYR7 98 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 CELA1Q9UNI1 258 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 EXOSC1Q9Y3B2 195 aaKnown RBP7.56□□□□□ -1.2
CSDE1-215ENST00000533818 WASHC3Q9Y3C0 194 aa7.56□□□□□ -1.2
CSDE1-215ENST00000533818 OR4C46A6NHA9 309 aa7.55□□□□□ -1.2
CSDE1-215ENST00000533818 H0YJW9 148 aa7.55□□□□□ -1.2
CSDE1-215ENST00000533818 KRT36O76013 467 aa7.55□□□□□ -1.2
CSDE1-215ENST00000533818 OR9G9P0C7N8 305 aa7.55□□□□□ -1.2
CSDE1-215ENST00000533818 C8orf88P0DMB2 117 aa7.55□□□□□ -1.2
CSDE1-215ENST00000533818 SLC2A5P22732 501 aa7.55□□□□□ -1.2
CSDE1-215ENST00000533818 NPY1RP25929 384 aa7.55□□□□□ -1.2
CSDE1-215ENST00000533818 PPP1CCP36873 323 aaKnown RBP7.55□□□□□ -1.2
CSDE1-215ENST00000533818 HMGA2P52926 109 aa7.55□□□□□ -1.2
CSDE1-215ENST00000533818 FAM3BP58499 235 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-215ENST00000533818 GNMTQ14749 295 aa7.55□□□□□ -1.2
CSDE1-215ENST00000533818 ZSCAN26Q16670 478 aa7.55□□□□□ -1.2
CSDE1-215ENST00000533818 SLC25A30Q5SVS4 291 aa7.55□□□□□ -1.2
CSDE1-215ENST00000533818 ZNF497Q6ZNH5 498 aa7.55□□□□□ -1.2
CSDE1-215ENST00000533818 ARPINQ7Z6K5 226 aa7.55□□□□□ -1.2
CSDE1-215ENST00000533818 OR52L2PQ8NGH6 319 aa7.55□□□□□ -1.2
CSDE1-215ENST00000533818 NEK7Q8TDX7 302 aa7.55□□□□□ -1.2
CSDE1-215ENST00000533818 MCUR1Q96AQ8 359 aa7.55□□□□□ -1.2
CSDE1-215ENST00000533818 PYURFQ96I23 114 aa7.55□□□□□ -1.2
CSDE1-215ENST00000533818 PHB2Q99623 299 aa7.55□□□□□ -1.2
CSDE1-215ENST00000533818 SULT4A1Q9BR01 284 aa7.55□□□□□ -1.2
CSDE1-215ENST00000533818 MRPL27Q9P0M9 148 aaKnown RBP7.55□□□□□ -1.2
CSDE1-215ENST00000533818 TRAPPC2LQ9UL33 140 aa7.55□□□□□ -1.2
CSDE1-215ENST00000533818 TRBV9A0A0B4J1U6 114 aa7.54□□□□□ -1.2
CSDE1-215ENST00000533818 LOC107986453A0A1B0GWG9 222 aa7.54□□□□□ -1.2
CSDE1-215ENST00000533818 H3BN98 237 aa7.54□□□□□ -1.2
CSDE1-215ENST00000533818 H3BNX3 289 aa7.54□□□□□ -1.2
CSDE1-215ENST00000533818 TNFRSF11BO00300 401 aa7.54□□□□□ -1.2
CSDE1-215ENST00000533818 NME4O00746 187 aa7.54□□□□□ -1.2
CSDE1-215ENST00000533818 CCNB2O95067 398 aa7.54□□□□□ -1.2
CSDE1-215ENST00000533818 SPDEFO95238 335 aa7.54□□□□□ -1.2
CSDE1-215ENST00000533818 MT-ND2P03891 347 aa7.54□□□□□ -1.2
CSDE1-215ENST00000533818 SEMG1P04279 462 aa7.54□□□□□ -1.2
CSDE1-215ENST00000533818 ARL3P36405 182 aa7.54□□□□□ -1.2
CSDE1-215ENST00000533818 ATAD3CQ5T2N8 411 aa7.54□□□□□ -1.2
CSDE1-215ENST00000533818 SYT6Q5T7P8 510 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-215ENST00000533818 LAMTOR1Q6IAA8 161 aa7.54□□□□□ -1.2
CSDE1-215ENST00000533818 GLYATQ6IB77 296 aa7.54□□□□□ -1.2
CSDE1-215ENST00000533818 STX19Q8N4C7 294 aa7.54□□□□□ -1.2
CSDE1-215ENST00000533818 NECAP1Q8NC96 275 aa7.54□□□□□ -1.2
CSDE1-215ENST00000533818 STON2Q8WXE9 905 aa7.54□□□□□ -1.2
CSDE1-215ENST00000533818 FAM210BQ96KR6 192 aa7.54□□□□□ -1.2
CSDE1-215ENST00000533818 CNN2Q99439 309 aaKnown RBP7.54□□□□□ -1.2
CSDE1-215ENST00000533818 KCTD14Q9BQ13 255 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms