RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 MRPS14O60783 128 aaKnown RBP10.47□□□□□ -0.73
VPS28-211ENST00000530790 ZBTB25P24278 435 aa10.47□□□□□ -0.73
VPS28-211ENST00000530790 FOXE3Q13461 319 aa10.47□□□□□ -0.73
VPS28-211ENST00000530790 C2orf76Q3KRA6 126 aa10.47□□□□□ -0.73
VPS28-211ENST00000530790 FOXB2Q5VYV0 432 aa10.47□□□□□ -0.73
VPS28-211ENST00000530790 ETV3LQ6ZN32 361 aa10.47□□□□□ -0.73
VPS28-211ENST00000530790 C18orf65Q6ZTR6 163 aa10.47□□□□□ -0.73
VPS28-211ENST00000530790 ZNF695Q8IW36 515 aa10.47□□□□□ -0.73
VPS28-211ENST00000530790 LINC00482Q8N8I6 264 aa10.47□□□□□ -0.73
VPS28-211ENST00000530790 MRAPQ8TCY5 172 aa10.47□□□□□ -0.73
VPS28-211ENST00000530790 EDARADDQ8WWZ3 215 aa10.47□□□□□ -0.73
VPS28-211ENST00000530790 ARHGAP5-AS1Q96IT6 56 aa10.47□□□□□ -0.73
VPS28-211ENST00000530790 AURKAIP1Q9NWT8 199 aaPredicted RBP10.47□□□□□ -0.73
VPS28-211ENST00000530790 ITGB1BP1O14713 200 aa10.46□□□□□ -0.73
VPS28-211ENST00000530790 LDLRAD4O15165 306 aa10.46□□□□□ -0.73
VPS28-211ENST00000530790 OR5H8P0DN80 308 aa10.46□□□□□ -0.73
VPS28-211ENST00000530790 THBS3P49746 956 aa10.46□□□□□ -0.73
VPS28-211ENST00000530790 TMEM50BP56557 158 aa10.46□□□□□ -0.73
VPS28-211ENST00000530790 OR10A3P58181 314 aa10.46□□□□□ -0.73
VPS28-211ENST00000530790 RPL39P5Q59GN2 51 aa10.46□□□□□ -0.73
VPS28-211ENST00000530790 CD200R1LQ6Q8B3 271 aa10.46□□□□□ -0.73
VPS28-211ENST00000530790 FAM131AQ6UXB0 335 aa10.46□□□□□ -0.73
VPS28-211ENST00000530790 MRPL41Q8IXM3 137 aaKnown RBP10.46□□□□□ -0.73
VPS28-211ENST00000530790 DPF1Q92782 380 aa10.46□□□□□ -0.73
VPS28-211ENST00000530790 GPR61Q9BZJ8 451 aa10.46□□□□□ -0.73
VPS28-211ENST00000530790 PARP12Q9H0J9 701 aaKnown RBP10.46□□□□□ -0.73
VPS28-211ENST00000530790 Q9N2K0 584 aa10.46□□□□□ -0.73
VPS28-211ENST00000530790 OR1A1Q9P1Q5 309 aa10.46□□□□□ -0.73
VPS28-211ENST00000530790 KIAA1456Q9P272 454 aa10.46□□□□□ -0.73
VPS28-211ENST00000530790 ZNF580Q9UK33 172 aa10.46□□□□□ -0.73
VPS28-211ENST00000530790 RAB22AQ9UL26 194 aa10.46□□□□□ -0.73
VPS28-211ENST00000530790 TRDV1A0A1B0GX56 115 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 OR5H14A6NHG9 310 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 IFITM5A6NNB3 132 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 HLA-DRB1P01911 266 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 IGF1P05019 195 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 RPLP1P05386 114 aaKnown RBP10.45□□□□□ -0.74
VPS28-211ENST00000530790 ELANEP08246 267 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 CD3GP09693 182 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 RAB3BP20337 219 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 GALP22466 123 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 GADD45AP24522 165 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 CNTFRP26992 372 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 PSMB9P28065 219 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 CEACAM6P40199 344 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 MYCNOSP40205 109 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 CFHR3Q02985 330 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 PLAC9Q5JTB6 97 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 UBE2UQ5VVX9 321 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 C22orf42Q6IC83 251 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 FCGR1BQ92637 280 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 RAB3CQ96E17 227 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 ABHD14BQ96IU4 210 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 GHITMQ9H3K2 345 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 PARP11Q9NR21 331 aa10.45□□□□□ -0.74
VPS28-211ENST00000530790 NOTCH3Q9UM47 2321 aa10.44□□□□□ -0.74
VPS28-211ENST00000530790 SHISA3A0PJX4 238 aa10.44□□□□□ -0.74
VPS28-211ENST00000530790 TRDCB7Z8K6 153 aa10.44□□□□□ -0.74
VPS28-211ENST00000530790 H7C2Y5 167 aa10.44□□□□□ -0.74
VPS28-211ENST00000530790 ATP6V0E1O15342 81 aa10.44□□□□□ -0.74
VPS28-211ENST00000530790 IGHG4P01861 327 aa10.44□□□□□ -0.74
VPS28-211ENST00000530790 SCTP09683 121 aa10.44□□□□□ -0.74
VPS28-211ENST00000530790 RAB6AP20340 208 aa10.44□□□□□ -0.74
VPS28-211ENST00000530790 PLA2G7Q13093 441 aa10.44□□□□□ -0.74
VPS28-211ENST00000530790 C5orf64Q2M2E5 130 aa10.44□□□□□ -0.74
VPS28-211ENST00000530790 LCNL1Q6ZST4 164 aa10.44□□□□□ -0.74
VPS28-211ENST00000530790 SPARTQ8N0X7 666 aa10.44□□□□□ -0.74
VPS28-211ENST00000530790 RNF152Q8N8N0 203 aa10.44□□□□□ -0.74
VPS28-211ENST00000530790 NPBQ8NG41 125 aa10.44□□□□□ -0.74
VPS28-211ENST00000530790 OR8U1Q8NH10 309 aa10.44□□□□□ -0.74
VPS28-211ENST00000530790 RITA1Q96K30 269 aa10.44□□□□□ -0.74
VPS28-211ENST00000530790 KCTD7Q96MP8 289 aa10.44□□□□□ -0.74
VPS28-211ENST00000530790 P2RX4Q99571 388 aa10.44□□□□□ -0.74
VPS28-211ENST00000530790 CHCHD6Q9BRQ6 235 aa10.44□□□□□ -0.74
VPS28-211ENST00000530790 AGMATQ9BSE5 352 aa10.44□□□□□ -0.74
VPS28-211ENST00000530790 MCRIP2Q9BUT9 160 aaKnown RBP10.44□□□□□ -0.74
VPS28-211ENST00000530790 OR51J1Q9H342 316 aa10.44□□□□□ -0.74
VPS28-211ENST00000530790 H0YJW9 148 aa10.43□□□□□ -0.74
VPS28-211ENST00000530790 RBBP9O75884 186 aa10.43□□□□□ -0.74
VPS28-211ENST00000530790 NDUFA3O95167 84 aa10.43□□□□□ -0.74
VPS28-211ENST00000530790 FCGR3AP08637 254 aa10.43□□□□□ -0.74
VPS28-211ENST00000530790 CT45A6P0DMU7 189 aa10.43□□□□□ -0.74
VPS28-211ENST00000530790 CT45A5P0DMU8 189 aa10.43□□□□□ -0.74
VPS28-211ENST00000530790 CT45A7P0DMV0 189 aa10.43□□□□□ -0.74
VPS28-211ENST00000530790 MC5RP33032 325 aa10.43□□□□□ -0.74
VPS28-211ENST00000530790 SERPINB10P48595 397 aa10.43□□□□□ -0.74
VPS28-211ENST00000530790 RAB25P57735 213 aa10.43□□□□□ -0.74
VPS28-211ENST00000530790 KIR2DS1Q14954 304 aa10.43□□□□□ -0.74
VPS28-211ENST00000530790 PLGLAQ15195 96 aa10.43□□□□□ -0.74
VPS28-211ENST00000530790 MOGAT2Q3SYC2 334 aa10.43□□□□□ -0.74
VPS28-211ENST00000530790 LIN54Q6MZP7 749 aa10.43□□□□□ -0.74
VPS28-211ENST00000530790 GLDNQ6ZMI3 551 aaPredicted RBP10.43□□□□□ -0.74
VPS28-211ENST00000530790 OR4A4PQ8NGN8 299 aa10.43□□□□□ -0.74
VPS28-211ENST00000530790 OR10R2Q8NGX6 335 aa10.43□□□□□ -0.74
VPS28-211ENST00000530790 PTX4Q96A99 478 aa10.43□□□□□ -0.74
VPS28-211ENST00000530790 DUX3Q96PT4 197 aa10.43□□□□□ -0.74
VPS28-211ENST00000530790 C11orf54Q9H0W9 315 aaPredicted RBP10.43□□□□□ -0.74
VPS28-211ENST00000530790 RDH8Q9NYR8 311 aa10.43□□□□□ -0.74
VPS28-211ENST00000530790 ZNF221Q9UK13 617 aa10.43□□□□□ -0.74
VPS28-211ENST00000530790 WASHC3Q9Y3C0 194 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms