RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 COPS4Q9BT78 406 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 RANBP3Q9H6Z4 567 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-212ENST00000529046 METTL8Q9H825 291 aaKnown RBP3.46□□□□□ -1.86
CSDE1-212ENST00000529046 RAB18Q9NP72 206 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 CMC2Q9NRP2 79 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 ADA2Q9NZK5 511 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 TGP01266 2768 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 DOCK11Q5JSL3 2073 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 CMYA5Q8N3K9 4069 aa3.46□□□□□ -1.86
CSDE1-212ENST00000529046 A0A0U1RQV5 110 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 MFSD2BA6NFX1 497 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 VGLL3A8MV65 326 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 TNFRSF11BO00300 401 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 CDIPTO14735 213 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 PHOX2AO14813 284 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 NPFFO15130 113 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 NDUFB3O43676 98 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 NOS1APO75052 506 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-212ENST00000529046 RHBDL1O75783 438 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 DIRAS1O95057 198 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 CCNB2O95067 398 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 IFNGP01579 166 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 IGLV3-1P01715 115 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 GIG44P09565 113 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-212ENST00000529046 PSKH1P11801 424 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 HSD11B1P28845 292 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 PRKXP51817 358 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 HERPUD1Q15011 391 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 CEACAM21Q3KPI0 293 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 KLHL12Q53G59 568 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 HSP90B2PQ58FF3 399 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 OTPQ5XKR4 325 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 Q6ZSR3 168 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 ZNF826PQ6ZT77 177 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 ERASQ7Z444 233 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 WDR86Q86TI4 376 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 IQCF2Q8IXL9 164 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 Q8N2B8 174 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 C19orf18Q8NEA5 215 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 OR5A2Q8NGI9 324 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 OR8D4Q8NGM9 314 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 OR9Q1Q8NGQ5 310 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 OR5K1Q8NHB7 308 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 OTOSQ8NHW6 89 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 ANGPTL6Q8NI99 470 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 MRAPQ8TCY5 172 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 LRRC29Q8WV35 223 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 OR5P3Q8WZ94 311 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 SDSLQ96GA7 329 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 REEP6Q96HR9 211 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 MICU1Q9BPX6 476 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 RTL8AQ9BWD3 113 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 TSSK6Q9BXA6 273 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 GON7Q9BXV9 100 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 GPR61Q9BZJ8 451 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 ELL3Q9HB65 397 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-212ENST00000529046 ZNF222Q9UK12 451 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 RHBDD3Q9Y3P4 386 aa3.45□□□□□ -1.86
CSDE1-212ENST00000529046 CHTOPQ9Y3Y2 248 aaKnown RBP3.45□□□□□ -1.86
CSDE1-212ENST00000529046 TRAV9-2A0A087WT02 112 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 IGHV3-64DA0A0J9YX35 117 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 ZNF816-ZNF321PA0A0X1KG74 233 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 TVP23AA6NH52 213 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 OR5B21A6NL26 309 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 OR2AT4A6NND4 320 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 DHRS7CA6NNS2 312 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 RIIAD1A6NNX1 92 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 ZNF254O75437 659 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 DCTN3O75935 186 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 SERPINA3P01011 423 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 RBP4P02753 201 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 HMGN1P05114 100 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 H2BFMP0C1H6 154 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 ZNF735P0CB33 412 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 ZNF3P17036 446 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 ALOX5APP20292 161 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 PYCR1P32322 319 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 RPS27P42677 84 aaKnown RBP3.44□□□□□ -1.86
CSDE1-212ENST00000529046 CX3CR1P49238 355 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 DYNLT3P51808 116 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 EFNB2P52799 333 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 ZNF121P58317 390 aaPredicted RBP3.44□□□□□ -1.86
CSDE1-212ENST00000529046 GNG3P63215 75 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 CDK5Q00535 292 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 EMX1Q04741 257 aaPredicted RBP3.44□□□□□ -1.86
CSDE1-212ENST00000529046 CRMP1Q14194 572 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 EIF2B1Q14232 305 aaKnown RBP3.44□□□□□ -1.86
CSDE1-212ENST00000529046 ATAD3CQ5T2N8 411 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 TMEM42Q69YG0 159 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 OR2T5Q6IEZ7 315 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 LCN8Q6JVE9 175 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 HCP5Q6MZN7 132 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 EGFL6Q8IUX8 553 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 ZNF561Q8N587 486 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 C11orf42Q8N5U0 333 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 FAM216BQ8N7L0 139 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 WFDC9Q8NEX5 89 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 OR2T29Q8NH02 315 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 GTSF1Q8WW33 167 aa3.44□□□□□ -1.86
CSDE1-212ENST00000529046 DNAJC9Q8WXX5 260 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms