RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 EDARADDQ8WWZ3 215 aa11.31□□□□□ -0.6
CAPN1-216ENST00000528739 NABP2Q9BQ15 211 aa11.31□□□□□ -0.6
CAPN1-216ENST00000528739 ABCG5Q9H222 651 aa11.31□□□□□ -0.6
CAPN1-216ENST00000528739 KIAA1456Q9P272 454 aa11.31□□□□□ -0.6
CAPN1-216ENST00000528739 ZNF221Q9UK13 617 aa11.31□□□□□ -0.6
CAPN1-216ENST00000528739 RBM7Q9Y580 266 aaKnown RBP11.31□□□□□ -0.6
CAPN1-216ENST00000528739 LINC01548A6NM66 108 aa11.3□□□□□ -0.6
CAPN1-216ENST00000528739 FOXI3A8MTJ6 420 aaPredicted RBP11.3□□□□□ -0.6
CAPN1-216ENST00000528739 NOTOA8MTQ0 251 aa11.3□□□□□ -0.6
CAPN1-216ENST00000528739 ADARB2-AS1A8MUL3 147 aa11.3□□□□□ -0.6
CAPN1-216ENST00000528739 H7C2Y5 167 aa11.3□□□□□ -0.6
CAPN1-216ENST00000528739 AP4M1O00189 453 aa11.3□□□□□ -0.6
CAPN1-216ENST00000528739 BET1O15155 118 aa11.3□□□□□ -0.6
CAPN1-216ENST00000528739 GSTP1P09211 210 aaKnown RBP11.3□□□□□ -0.6
CAPN1-216ENST00000528739 FGF9P31371 208 aaPredicted RBP11.3□□□□□ -0.6
CAPN1-216ENST00000528739 GPR12P47775 334 aa11.3□□□□□ -0.6
CAPN1-216ENST00000528739 ACTBP60709 375 aa11.3□□□□□ -0.6
CAPN1-216ENST00000528739 PLGLAQ15195 96 aa11.3□□□□□ -0.6
CAPN1-216ENST00000528739 TCTEX1D4Q5JR98 221 aa11.3□□□□□ -0.6
CAPN1-216ENST00000528739 LY6G6FQ5SQ64 297 aa11.3□□□□□ -0.6
CAPN1-216ENST00000528739 GLDNQ6ZMI3 551 aaPredicted RBP11.3□□□□□ -0.6
CAPN1-216ENST00000528739 Q6ZPA2 131 aa11.3□□□□□ -0.6
CAPN1-216ENST00000528739 ZNF833PQ6ZTB9 187 aa11.3□□□□□ -0.6
CAPN1-216ENST00000528739 STPG2Q8N412 459 aa11.3□□□□□ -0.6
CAPN1-216ENST00000528739 Q8N6K4 173 aa11.3□□□□□ -0.6
CAPN1-216ENST00000528739 MAFIPQ8WZ33 124 aa11.3□□□□□ -0.6
CAPN1-216ENST00000528739 PHF21AQ96BD5 680 aa11.3□□□□□ -0.6
CAPN1-216ENST00000528739 KCTD7Q96MP8 289 aa11.3□□□□□ -0.6
CAPN1-216ENST00000528739 GON7Q9BXV9 100 aa11.3□□□□□ -0.6
CAPN1-216ENST00000528739 PARP12Q9H0J9 701 aaKnown RBP11.3□□□□□ -0.6
CAPN1-216ENST00000528739 IFI27L2Q9H2X8 130 aa11.3□□□□□ -0.6
CAPN1-216ENST00000528739 FABP7O15540 132 aa11.29□□□□□ -0.6
CAPN1-216ENST00000528739 HIST1H1DP16402 221 aaKnown RBP11.29□□□□□ -0.6
CAPN1-216ENST00000528739 CD36P16671 472 aa11.29□□□□□ -0.6
CAPN1-216ENST00000528739 VDAC1P21796 283 aa11.29□□□□□ -0.6
CAPN1-216ENST00000528739 KIR2DS1Q14954 304 aa11.29□□□□□ -0.6
CAPN1-216ENST00000528739 TPRA1Q86W33 373 aa11.29□□□□□ -0.6
CAPN1-216ENST00000528739 C11orf54Q9H0W9 315 aaPredicted RBP11.29□□□□□ -0.6
CAPN1-216ENST00000528739 VCX3AQ9NNX9 186 aa11.29□□□□□ -0.6
CAPN1-216ENST00000528739 PLSCR3Q9NRY6 295 aa11.29□□□□□ -0.6
CAPN1-216ENST00000528739 ZNF230Q9UIE0 474 aaPredicted RBP11.29□□□□□ -0.6
CAPN1-216ENST00000528739 ZNF107Q9UII5 783 aaPredicted RBP11.29□□□□□ -0.6
CAPN1-216ENST00000528739 NBR2O15453 112 aa11.28□□□□□ -0.6
CAPN1-216ENST00000528739 FCGR3AP08637 254 aa11.28□□□□□ -0.6
CAPN1-216ENST00000528739 GSTT2P0CG29 244 aa11.28□□□□□ -0.6
CAPN1-216ENST00000528739 GSTT2BP0CG30 244 aa11.28□□□□□ -0.6
CAPN1-216ENST00000528739 SNRPBP14678 240 aaKnown RBP11.28□□□□□ -0.6
CAPN1-216ENST00000528739 CNTFRP26992 372 aa11.28□□□□□ -0.6
CAPN1-216ENST00000528739 SDC2P34741 201 aa11.28□□□□□ -0.6
CAPN1-216ENST00000528739 PNLIPRP3Q17RR3 467 aa11.28□□□□□ -0.6
CAPN1-216ENST00000528739 CDNFQ49AH0 187 aa11.28□□□□□ -0.6
CAPN1-216ENST00000528739 KCTD21Q4G0X4 260 aa11.28□□□□□ -0.6
CAPN1-216ENST00000528739 PDLIM3Q53GG5 364 aaPredicted RBP11.28□□□□□ -0.6
CAPN1-216ENST00000528739 OXLD1Q5BKU9 147 aa11.28□□□□□ -0.6
CAPN1-216ENST00000528739 TEX38Q6PEX7 206 aa11.28□□□□□ -0.6
CAPN1-216ENST00000528739 FAM131AQ6UXB0 335 aa11.28□□□□□ -0.6
CAPN1-216ENST00000528739 NR2C2APQ86WQ0 139 aa11.28□□□□□ -0.6
CAPN1-216ENST00000528739 OR4A4PQ8NGN8 299 aa11.28□□□□□ -0.6
CAPN1-216ENST00000528739 OR10J5Q8NHC4 309 aa11.28□□□□□ -0.6
CAPN1-216ENST00000528739 RITA1Q96K30 269 aa11.28□□□□□ -0.6
CAPN1-216ENST00000528739 HSPB9Q9BQS6 159 aa11.28□□□□□ -0.6
CAPN1-216ENST00000528739 GINS4Q9BRT9 223 aa11.28□□□□□ -0.6
CAPN1-216ENST00000528739 GHITMQ9H3K2 345 aa11.28□□□□□ -0.6
CAPN1-216ENST00000528739 RNF167Q9H6Y7 350 aa11.28□□□□□ -0.6
CAPN1-216ENST00000528739 RDH8Q9NYR8 311 aa11.28□□□□□ -0.6
CAPN1-216ENST00000528739 KCNK7Q9Y2U2 307 aa11.28□□□□□ -0.6
CAPN1-216ENST00000528739 RAB27BO00194 218 aa11.27□□□□□ -0.61
CAPN1-216ENST00000528739 CLEC2LP0C7M8 214 aa11.27□□□□□ -0.61
CAPN1-216ENST00000528739 MC5RP33032 325 aa11.27□□□□□ -0.61
CAPN1-216ENST00000528739 SERPINB10P48595 397 aa11.27□□□□□ -0.61
CAPN1-216ENST00000528739 ARL6IP1Q15041 203 aa11.27□□□□□ -0.61
CAPN1-216ENST00000528739 IGSF11Q5DX21 431 aa11.27□□□□□ -0.61
CAPN1-216ENST00000528739 CXorf66Q5JRM2 361 aaPredicted RBP11.27□□□□□ -0.61
CAPN1-216ENST00000528739 IDNKQ5T6J7 187 aa11.27□□□□□ -0.61
CAPN1-216ENST00000528739 LIN54Q6MZP7 749 aa11.27□□□□□ -0.61
CAPN1-216ENST00000528739 FAM71F2Q6NXP2 309 aa11.27□□□□□ -0.61
CAPN1-216ENST00000528739 SFXN4Q6P4A7 337 aa11.27□□□□□ -0.61
CAPN1-216ENST00000528739 FAM71E2Q8N5Q1 922 aa11.27□□□□□ -0.61
CAPN1-216ENST00000528739 COMMD1Q8N668 190 aa11.27□□□□□ -0.61
CAPN1-216ENST00000528739 DRAXINQ8NBI3 349 aaPredicted RBP11.27□□□□□ -0.61
CAPN1-216ENST00000528739 KLHL30-AS1Q8NEE0 82 aa11.27□□□□□ -0.61
CAPN1-216ENST00000528739 ABHD5Q8WTS1 349 aa11.27□□□□□ -0.61
CAPN1-216ENST00000528739 PTX4Q96A99 478 aa11.27□□□□□ -0.61
CAPN1-216ENST00000528739 ST6GALNAC5Q9BVH7 336 aa11.27□□□□□ -0.61
CAPN1-216ENST00000528739 PARP11Q9NR21 331 aa11.27□□□□□ -0.61
CAPN1-216ENST00000528739 ZFP57Q9NU63 452 aa11.27□□□□□ -0.61
CAPN1-216ENST00000528739 OR5H14A6NHG9 310 aa11.26□□□□□ -0.61
CAPN1-216ENST00000528739 J3QRK9 145 aa11.26□□□□□ -0.61
CAPN1-216ENST00000528739 MFNGO00587 321 aa11.26□□□□□ -0.61
CAPN1-216ENST00000528739 ITGB1BP1O14713 200 aa11.26□□□□□ -0.61
CAPN1-216ENST00000528739 PRB2P02812 416 aaPredicted RBP11.26□□□□□ -0.61
CAPN1-216ENST00000528739 OR8U9P0C7N5 309 aa11.26□□□□□ -0.61
CAPN1-216ENST00000528739 CT45A6P0DMU7 189 aa11.26□□□□□ -0.61
CAPN1-216ENST00000528739 CT45A5P0DMU8 189 aa11.26□□□□□ -0.61
CAPN1-216ENST00000528739 CT45A7P0DMV0 189 aa11.26□□□□□ -0.61
CAPN1-216ENST00000528739 IGLL1P15814 213 aa11.26□□□□□ -0.61
CAPN1-216ENST00000528739 RAB25P57735 213 aa11.26□□□□□ -0.61
CAPN1-216ENST00000528739 RPL23AP62750 156 aaKnown RBP11.26□□□□□ -0.61
CAPN1-216ENST00000528739 C8orf86Q6ZUL3 223 aa11.26□□□□□ -0.61
CAPN1-216ENST00000528739 OR8U1Q8NH10 309 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms