RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 GADD45AP24522 165 aa7.59□□□□□ -1.19
CHD7-208ENST00000528280 PPP1CCP36873 323 aaKnown RBP7.59□□□□□ -1.19
CHD7-208ENST00000528280 CEACAM6P40199 344 aa7.59□□□□□ -1.19
CHD7-208ENST00000528280 GPR12P47775 334 aa7.59□□□□□ -1.19
CHD7-208ENST00000528280 SERPINB10P48595 397 aa7.59□□□□□ -1.19
CHD7-208ENST00000528280 VEGFCP49767 419 aa7.59□□□□□ -1.19
CHD7-208ENST00000528280 BEAN1Q3B7T3 259 aa7.59□□□□□ -1.19
CHD7-208ENST00000528280 TCTEX1D4Q5JR98 221 aa7.59□□□□□ -1.19
CHD7-208ENST00000528280 KHDC1LQ5JSQ8 128 aa7.59□□□□□ -1.19
CHD7-208ENST00000528280 ZNF833PQ6ZTB9 187 aa7.59□□□□□ -1.19
CHD7-208ENST00000528280 ANKRD13BQ86YJ7 626 aa7.59□□□□□ -1.19
CHD7-208ENST00000528280 STPG2Q8N412 459 aa7.59□□□□□ -1.19
CHD7-208ENST00000528280 PTX4Q96A99 478 aa7.59□□□□□ -1.19
CHD7-208ENST00000528280 PPP1R14BQ96C90 147 aa7.59□□□□□ -1.19
CHD7-208ENST00000528280 RCC1LQ96I51 464 aaKnown RBP7.59□□□□□ -1.19
CHD7-208ENST00000528280 RNF5Q99942 180 aa7.59□□□□□ -1.19
CHD7-208ENST00000528280 CMSS1Q9BQ75 279 aaKnown RBP7.59□□□□□ -1.19
CHD7-208ENST00000528280 ZNF251Q9BRH9 671 aa7.59□□□□□ -1.19
CHD7-208ENST00000528280 NICN1Q9BSH3 213 aa7.59□□□□□ -1.19
CHD7-208ENST00000528280 MCRIP2Q9BUT9 160 aaKnown RBP7.59□□□□□ -1.19
CHD7-208ENST00000528280 C12orf4Q9NQ89 552 aa7.59□□□□□ -1.19
CHD7-208ENST00000528280 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.59□□□□□ -1.19
CHD7-208ENST00000528280 NECAP2Q9NVZ3 263 aa7.59□□□□□ -1.19
CHD7-208ENST00000528280 NDUFB11Q9NX14 153 aa7.59□□□□□ -1.19
CHD7-208ENST00000528280 SLC23A1Q9UHI7 598 aa7.59□□□□□ -1.19
CHD7-208ENST00000528280 ZNF580Q9UK33 172 aa7.59□□□□□ -1.19
CHD7-208ENST00000528280 IFITM5A6NNB3 132 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 TRDCB7Z8K6 153 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 RBBP9O75884 186 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 IGF1P05019 195 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 CD3GP09693 182 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 RAB3BP20337 219 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 RAB6AP20340 208 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 VDAC1P21796 283 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 FGF9P31371 208 aaPredicted RBP7.58□□□□□ -1.2
CHD7-208ENST00000528280 MYCNOSP40205 109 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 TMEM50BP56557 158 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 RPL23AP62750 156 aaKnown RBP7.58□□□□□ -1.2
CHD7-208ENST00000528280 FOXE3Q13461 319 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 CXorf66Q5JRM2 361 aaPredicted RBP7.58□□□□□ -1.2
CHD7-208ENST00000528280 UBE2UQ5VVX9 321 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 GPR107Q5VW38 600 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 LIN54Q6MZP7 749 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 ZNF329Q86UD4 541 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 TPRA1Q86W33 373 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 C1QL4Q86Z23 238 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 BORCS5Q969J3 196 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 RAB3CQ96E17 227 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 ARHGAP5-AS1Q96IT6 56 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 GFI1Q99684 422 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 NABP2Q9BQ15 211 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 PECRQ9BY49 303 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 Q9N2K0 584 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 KIAA1456Q9P272 454 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 AK3Q9UIJ7 227 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 ZNF221Q9UK13 617 aa7.58□□□□□ -1.2
CHD7-208ENST00000528280 PLXNB1O43157 2135 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 OR5H14A6NHG9 310 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 FOXI3A8MTJ6 420 aaPredicted RBP7.57□□□□□ -1.2
CHD7-208ENST00000528280 NUDT19A8MXV4 375 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 ZNF736B4DX44 427 aaPredicted RBP7.57□□□□□ -1.2
CHD7-208ENST00000528280 LDLRAD4O15165 306 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 SCGNO76038 276 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 GABARAPO95166 117 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 DIRAS3O95661 229 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 TALDO1P37837 337 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 CDX1P47902 265 aaPredicted RBP7.57□□□□□ -1.2
CHD7-208ENST00000528280 F2RL1P55085 397 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 ACTBP60709 375 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 TAGLNQ01995 201 aaKnown RBP7.57□□□□□ -1.2
CHD7-208ENST00000528280 GNMTQ14749 295 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 KIR2DS1Q14954 304 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 MMDQ15546 238 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 NEDD8Q15843 81 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 SSX1Q16384 188 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 SRSF7Q16629 238 aaKnown RBP eCLIP7.57□□□□□ -1.2
CHD7-208ENST00000528280 OXLD1Q5BKU9 147 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 FAM53AQ6NSI3 398 aaPredicted RBP7.57□□□□□ -1.2
CHD7-208ENST00000528280 TMEM65Q6PI78 240 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 ZNF695Q8IW36 515 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 ODF3L1Q8IXM7 274 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 FAM71E2Q8N5Q1 922 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 NPBQ8NG41 125 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 OR4A4PQ8NGN8 299 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 DPF1Q92782 380 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 NOL4LQ96MY1 436 aaPredicted RBP7.57□□□□□ -1.2
CHD7-208ENST00000528280 FAM210AQ96ND0 272 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 KRTAP17-1Q9BYP8 105 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 ZNF107Q9UII5 783 aaPredicted RBP7.57□□□□□ -1.2
CHD7-208ENST00000528280 SSR3Q9UNL2 185 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 GAB2Q9UQC2 676 aa7.57□□□□□ -1.2
CHD7-208ENST00000528280 SAA2-SAA4A0A096LPE2 208 aa7.56□□□□□ -1.2
CHD7-208ENST00000528280 A0A0A6YYD4 124 aa7.56□□□□□ -1.2
CHD7-208ENST00000528280 TMEM272A0A1B0GTI8 110 aa7.56□□□□□ -1.2
CHD7-208ENST00000528280 NBR2O15453 112 aa7.56□□□□□ -1.2
CHD7-208ENST00000528280 TMEM127O75204 238 aa7.56□□□□□ -1.2
CHD7-208ENST00000528280 IGHG4P01861 327 aa7.56□□□□□ -1.2
CHD7-208ENST00000528280 HLA-DRB1P01911 266 aa7.56□□□□□ -1.2
CHD7-208ENST00000528280 GSTP1P09211 210 aaKnown RBP7.56□□□□□ -1.2
CHD7-208ENST00000528280 SAA2P0DJI9 122 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms