RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 ARSBP15848 533 aa8.22□□□□□ -1.09
CPSF1-203ENST00000527916 BLVRBP30043 206 aaPredicted RBP8.22□□□□□ -1.09
CPSF1-203ENST00000527916 HSPA13P48723 471 aa8.22□□□□□ -1.09
CPSF1-203ENST00000527916 INSL3P51460 131 aa8.22□□□□□ -1.09
CPSF1-203ENST00000527916 PSMD7P51665 324 aa8.22□□□□□ -1.09
CPSF1-203ENST00000527916 F2RL1P55085 397 aa8.22□□□□□ -1.09
CPSF1-203ENST00000527916 ZNF260Q3ZCT1 412 aa8.22□□□□□ -1.09
CPSF1-203ENST00000527916 FAM71F2Q6NXP2 309 aa8.22□□□□□ -1.09
CPSF1-203ENST00000527916 ZNF833PQ6ZTB9 187 aa8.22□□□□□ -1.09
CPSF1-203ENST00000527916 TMEM203Q969S6 136 aa8.22□□□□□ -1.09
CPSF1-203ENST00000527916 MGLLQ99685 303 aa8.22□□□□□ -1.09
CPSF1-203ENST00000527916 LPAR5Q9H1C0 372 aa8.22□□□□□ -1.09
CPSF1-203ENST00000527916 ACOT13Q9NPJ3 140 aa8.22□□□□□ -1.09
CPSF1-203ENST00000527916 PLEKHJ1Q9NW61 149 aa8.22□□□□□ -1.09
CPSF1-203ENST00000527916 ABRACLQ9P1F3 81 aa8.22□□□□□ -1.09
CPSF1-203ENST00000527916 MGAT4AQ9UM21 535 aa8.22□□□□□ -1.09
CPSF1-203ENST00000527916 IGHG4P01861 327 aa8.21□□□□□ -1.1
CPSF1-203ENST00000527916 ELANEP08246 267 aa8.21□□□□□ -1.1
CPSF1-203ENST00000527916 HSMCR30P0CW71 290 aa8.21□□□□□ -1.1
CPSF1-203ENST00000527916 SOX6P35712 828 aa8.21□□□□□ -1.1
CPSF1-203ENST00000527916 PPP1CCP36873 323 aaKnown RBP8.21□□□□□ -1.1
CPSF1-203ENST00000527916 CDX1P47902 265 aaPredicted RBP8.21□□□□□ -1.1
CPSF1-203ENST00000527916 FOXE3Q13461 319 aa8.21□□□□□ -1.1
CPSF1-203ENST00000527916 GNMTQ14749 295 aa8.21□□□□□ -1.1
CPSF1-203ENST00000527916 KIR2DS1Q14954 304 aa8.21□□□□□ -1.1
CPSF1-203ENST00000527916 LCNL1Q6ZST4 164 aa8.21□□□□□ -1.1
CPSF1-203ENST00000527916 MOB1BQ7L9L4 216 aa8.21□□□□□ -1.1
CPSF1-203ENST00000527916 OVCH2Q7RTZ1 564 aa8.21□□□□□ -1.1
CPSF1-203ENST00000527916 SVOPQ8N4V2 548 aa8.21□□□□□ -1.1
CPSF1-203ENST00000527916 CYYR1Q96J86 154 aa8.21□□□□□ -1.1
CPSF1-203ENST00000527916 GFI1Q99684 422 aa8.21□□□□□ -1.1
CPSF1-203ENST00000527916 NABP2Q9BQ15 211 aa8.21□□□□□ -1.1
CPSF1-203ENST00000527916 NICN1Q9BSH3 213 aa8.21□□□□□ -1.1
CPSF1-203ENST00000527916 PIPOXQ9P0Z9 390 aa8.21□□□□□ -1.1
CPSF1-203ENST00000527916 STEAP1Q9UHE8 339 aa8.21□□□□□ -1.1
CPSF1-203ENST00000527916 LINC00527Q9UJ94 153 aa8.21□□□□□ -1.1
CPSF1-203ENST00000527916 A0A0A6YYD4 124 aa8.2□□□□□ -1.1
CPSF1-203ENST00000527916 FOXI3A8MTJ6 420 aaPredicted RBP8.2□□□□□ -1.1
CPSF1-203ENST00000527916 RAB29O14966 203 aa8.2□□□□□ -1.1
CPSF1-203ENST00000527916 SOCS1O15524 211 aa8.2□□□□□ -1.1
CPSF1-203ENST00000527916 FRMD6-AS1P0C7T7 363 aa8.2□□□□□ -1.1
CPSF1-203ENST00000527916 OR5H8P0DN80 308 aa8.2□□□□□ -1.1
CPSF1-203ENST00000527916 RPS25P62851 125 aaKnown RBP8.2□□□□□ -1.1
CPSF1-203ENST00000527916 FABP5Q01469 135 aa8.2□□□□□ -1.1
CPSF1-203ENST00000527916 CFHR3Q02985 330 aa8.2□□□□□ -1.1
CPSF1-203ENST00000527916 TBCEQ15813 527 aaPredicted RBP8.2□□□□□ -1.1
CPSF1-203ENST00000527916 DEFB136Q30KP8 78 aa8.2□□□□□ -1.1
CPSF1-203ENST00000527916 CXorf66Q5JRM2 361 aaPredicted RBP8.2□□□□□ -1.1
CPSF1-203ENST00000527916 C5orf24Q7Z6I8 188 aa8.2□□□□□ -1.1
CPSF1-203ENST00000527916 NPBQ8NG41 125 aa8.2□□□□□ -1.1
CPSF1-203ENST00000527916 OR2AK2Q8NG84 335 aa8.2□□□□□ -1.1
CPSF1-203ENST00000527916 HSPB9Q9BQS6 159 aa8.2□□□□□ -1.1
CPSF1-203ENST00000527916 AGMATQ9BSE5 352 aa8.2□□□□□ -1.1
CPSF1-203ENST00000527916 CCDC90BQ9GZT6 254 aa8.2□□□□□ -1.1
CPSF1-203ENST00000527916 IFI27L2Q9H2X8 130 aa8.2□□□□□ -1.1
CPSF1-203ENST00000527916 PLGRKTQ9HBL7 147 aa8.2□□□□□ -1.1
CPSF1-203ENST00000527916 CHMP1AQ9HD42 196 aaPredicted RBP8.2□□□□□ -1.1
CPSF1-203ENST00000527916 AK6Q9Y3D8 172 aaKnown RBP8.2□□□□□ -1.1
CPSF1-203ENST00000527916 V9GY05 133 aa8.2□□□□□ -1.1
CPSF1-203ENST00000527916 SAA2-SAA4A0A096LPE2 208 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 ERICH4A6NGS2 130 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 LDLRAD4O15165 306 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 MRPS14O60783 128 aaKnown RBP8.19□□□□□ -1.1
CPSF1-203ENST00000527916 NDUFA3O95167 84 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 HLA-DRB1P01911 266 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 RPLP1P05386 114 aaKnown RBP8.19□□□□□ -1.1
CPSF1-203ENST00000527916 SAA2P0DJI9 122 aaPredicted RBP8.19□□□□□ -1.1
CPSF1-203ENST00000527916 VDAC1P21796 283 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 GALP22466 123 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 ZBTB25P24278 435 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 CALRP27797 417 aaKnown RBP8.19□□□□□ -1.1
CPSF1-203ENST00000527916 PSMB8P28062 276 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 PPIFP30405 207 aaKnown RBP8.19□□□□□ -1.1
CPSF1-203ENST00000527916 MC5RP33032 325 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 TMEM50BP56557 158 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 ACTBP60709 375 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 MMDQ15546 238 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 RAB11BQ15907 218 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 C2orf76Q3KRA6 126 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 IL1F10Q8WWZ1 152 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 EDARADDQ8WWZ3 215 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 FAM3DQ96BQ1 224 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 RNF5Q99942 180 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 ZNF251Q9BRH9 671 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 MRPL20Q9BYC9 149 aaKnown RBP8.19□□□□□ -1.1
CPSF1-203ENST00000527916 Q9N2K0 584 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 SLC23A1Q9UHI7 598 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 ZNF107Q9UII5 783 aaPredicted RBP8.19□□□□□ -1.1
CPSF1-203ENST00000527916 AK3Q9UIJ7 227 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 BLOC1S6Q9UL45 172 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 RAB26Q9ULW5 256 aa8.19□□□□□ -1.1
CPSF1-203ENST00000527916 TRAV1-2A0A0B4J238 106 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 NBR2O15453 112 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 MAP2K4P45985 399 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 OR3A3P47888 321 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 VEGFCP49767 419 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 P2RY14Q15391 338 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 C5orf64Q2M2E5 130 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 LIN54Q6MZP7 749 aa8.18□□□□□ -1.1
CPSF1-203ENST00000527916 CD200R1LQ6Q8B3 271 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms