RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 SOX6P35712 828 aa12.25□□□□□ -0.45
CAPN1-213ENST00000527897 ACTBP60709 375 aa12.25□□□□□ -0.45
CAPN1-213ENST00000527897 MOGAT2Q3SYC2 334 aa12.25□□□□□ -0.45
CAPN1-213ENST00000527897 RPL39P5Q59GN2 51 aa12.25□□□□□ -0.45
CAPN1-213ENST00000527897 ZNF833PQ6ZTB9 187 aa12.25□□□□□ -0.45
CAPN1-213ENST00000527897 FCGR1BQ92637 280 aa12.25□□□□□ -0.45
CAPN1-213ENST00000527897 YTHDF1Q9BYJ9 559 aaKnown RBP12.25□□□□□ -0.45
CAPN1-213ENST00000527897 Q9N2K0 584 aa12.25□□□□□ -0.45
CAPN1-213ENST00000527897 PIPOXQ9P0Z9 390 aa12.25□□□□□ -0.45
CAPN1-213ENST00000527897 TRBV6-6A0A0A6YYG2 114 aa12.24□□□□□ -0.45
CAPN1-213ENST00000527897 RAB29O14966 203 aa12.24□□□□□ -0.45
CAPN1-213ENST00000527897 RRP9O43818 475 aaKnown RBP12.24□□□□□ -0.45
CAPN1-213ENST00000527897 GNB3P16520 340 aa12.24□□□□□ -0.45
CAPN1-213ENST00000527897 GADD45AP24522 165 aa12.24□□□□□ -0.45
CAPN1-213ENST00000527897 RPL23AP62750 156 aaKnown RBP12.24□□□□□ -0.45
CAPN1-213ENST00000527897 LY6G6FQ5SQ64 297 aa12.24□□□□□ -0.45
CAPN1-213ENST00000527897 ZNF773Q6PK81 442 aa12.24□□□□□ -0.45
CAPN1-213ENST00000527897 FAM131AQ6UXB0 335 aa12.24□□□□□ -0.45
CAPN1-213ENST00000527897 GLDNQ6ZMI3 551 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-213ENST00000527897 LCNL1Q6ZST4 164 aa12.24□□□□□ -0.45
CAPN1-213ENST00000527897 C18orf65Q6ZTR6 163 aa12.24□□□□□ -0.45
CAPN1-213ENST00000527897 FAM71E2Q8N5Q1 922 aa12.24□□□□□ -0.45
CAPN1-213ENST00000527897 KLHL30-AS1Q8NEE0 82 aa12.24□□□□□ -0.45
CAPN1-213ENST00000527897 RITA1Q96K30 269 aa12.24□□□□□ -0.45
CAPN1-213ENST00000527897 TXNL4BQ9NX01 149 aaKnown RBP12.24□□□□□ -0.45
CAPN1-213ENST00000527897 ZNF107Q9UII5 783 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-213ENST00000527897 RNF150Q9ULK6 438 aa12.24□□□□□ -0.45
CAPN1-213ENST00000527897 STUB1Q9UNE7 303 aa12.24□□□□□ -0.45
CAPN1-213ENST00000527897 SSR3Q9UNL2 185 aa12.24□□□□□ -0.45
CAPN1-213ENST00000527897 PRKDCP78527 4128 aaKnown RBP12.23□□□□□ -0.45
CAPN1-213ENST00000527897 TRDCB7Z8K6 153 aa12.23□□□□□ -0.45
CAPN1-213ENST00000527897 H7C2Y5 167 aa12.23□□□□□ -0.45
CAPN1-213ENST00000527897 BET1O15155 118 aa12.23□□□□□ -0.45
CAPN1-213ENST00000527897 VDAC1P21796 283 aa12.23□□□□□ -0.45
CAPN1-213ENST00000527897 GALP22466 123 aa12.23□□□□□ -0.45
CAPN1-213ENST00000527897 NEDD8Q15843 81 aa12.23□□□□□ -0.45
CAPN1-213ENST00000527897 TEX38Q6PEX7 206 aa12.23□□□□□ -0.45
CAPN1-213ENST00000527897 C8orf86Q6ZUL3 223 aa12.23□□□□□ -0.45
CAPN1-213ENST00000527897 NR2C2APQ86WQ0 139 aa12.23□□□□□ -0.45
CAPN1-213ENST00000527897 OR10R2Q8NGX6 335 aa12.23□□□□□ -0.45
CAPN1-213ENST00000527897 EDARADDQ8WWZ3 215 aa12.23□□□□□ -0.45
CAPN1-213ENST00000527897 MAFIPQ8WZ33 124 aa12.23□□□□□ -0.45
CAPN1-213ENST00000527897 PHF21AQ96BD5 680 aa12.23□□□□□ -0.45
CAPN1-213ENST00000527897 C11orf54Q9H0W9 315 aaPredicted RBP12.23□□□□□ -0.45
CAPN1-213ENST00000527897 ATG5Q9H1Y0 275 aa12.23□□□□□ -0.45
CAPN1-213ENST00000527897 KIAA1456Q9P272 454 aa12.23□□□□□ -0.45
CAPN1-213ENST00000527897 RRP15Q9Y3B9 282 aaKnown RBP12.23□□□□□ -0.45
CAPN1-213ENST00000527897 METTL21EPA6NDL7 271 aa12.22□□□□□ -0.45
CAPN1-213ENST00000527897 NBR2O15453 112 aa12.22□□□□□ -0.45
CAPN1-213ENST00000527897 RPLP1P05386 114 aaKnown RBP12.22□□□□□ -0.45
CAPN1-213ENST00000527897 RAB6AP20340 208 aa12.22□□□□□ -0.45
CAPN1-213ENST00000527897 ARFRP1Q13795 201 aa12.22□□□□□ -0.45
CAPN1-213ENST00000527897 PLGLAQ15195 96 aa12.22□□□□□ -0.45
CAPN1-213ENST00000527897 PNLIPRP3Q17RR3 467 aa12.22□□□□□ -0.45
CAPN1-213ENST00000527897 CXorf66Q5JRM2 361 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-213ENST00000527897 COMMD1Q8N668 190 aa12.22□□□□□ -0.45
CAPN1-213ENST00000527897 DRAXINQ8NBI3 349 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-213ENST00000527897 GON7Q9BXV9 100 aa12.22□□□□□ -0.45
CAPN1-213ENST00000527897 OR51E2Q9H255 320 aa12.22□□□□□ -0.45
CAPN1-213ENST00000527897 PARP11Q9NR21 331 aa12.22□□□□□ -0.45
CAPN1-213ENST00000527897 ZNF230Q9UIE0 474 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-213ENST00000527897 DAPK2Q9UIK4 370 aa12.22□□□□□ -0.45
CAPN1-213ENST00000527897 ZNF221Q9UK13 617 aa12.22□□□□□ -0.45
CAPN1-213ENST00000527897 KCNK7Q9Y2U2 307 aa12.22□□□□□ -0.45
CAPN1-213ENST00000527897 IGKV1-6A0A0C4DH72 117 aa12.21□□□□□ -0.45
CAPN1-213ENST00000527897 LOC100506127A0A0U1RQW1 187 aa12.21□□□□□ -0.45
CAPN1-213ENST00000527897 NOTOA8MTQ0 251 aa12.21□□□□□ -0.45
CAPN1-213ENST00000527897 FCGR3AP08637 254 aa12.21□□□□□ -0.45
CAPN1-213ENST00000527897 GSTP1P09211 210 aaKnown RBP12.21□□□□□ -0.45
CAPN1-213ENST00000527897 CT45A6P0DMU7 189 aa12.21□□□□□ -0.45
CAPN1-213ENST00000527897 CT45A5P0DMU8 189 aa12.21□□□□□ -0.45
CAPN1-213ENST00000527897 CT45A7P0DMV0 189 aa12.21□□□□□ -0.45
CAPN1-213ENST00000527897 HIST1H1DP16402 221 aaKnown RBP12.21□□□□□ -0.45
CAPN1-213ENST00000527897 TALDO1P37837 337 aa12.21□□□□□ -0.45
CAPN1-213ENST00000527897 RAB25P57735 213 aa12.21□□□□□ -0.45
CAPN1-213ENST00000527897 FAM71F2Q6NXP2 309 aa12.21□□□□□ -0.45
CAPN1-213ENST00000527897 DUX3Q96PT4 197 aa12.21□□□□□ -0.45
CAPN1-213ENST00000527897 CHCHD6Q9BRQ6 235 aa12.21□□□□□ -0.45
CAPN1-213ENST00000527897 ZFP57Q9NU63 452 aa12.21□□□□□ -0.45
CAPN1-213ENST00000527897 RDH8Q9NYR8 311 aa12.21□□□□□ -0.45
CAPN1-213ENST00000527897 WSB1Q9Y6I7 421 aa12.21□□□□□ -0.45
CAPN1-213ENST00000527897 RAB27BO00194 218 aa12.2□□□□□ -0.46
CAPN1-213ENST00000527897 MFNGO00587 321 aa12.2□□□□□ -0.46
CAPN1-213ENST00000527897 FABP7O15540 132 aa12.2□□□□□ -0.46
CAPN1-213ENST00000527897 GSTT2P0CG29 244 aa12.2□□□□□ -0.46
CAPN1-213ENST00000527897 GSTT2BP0CG30 244 aa12.2□□□□□ -0.46
CAPN1-213ENST00000527897 SNRPBP14678 240 aaKnown RBP12.2□□□□□ -0.46
CAPN1-213ENST00000527897 FGF9P31371 208 aaPredicted RBP12.2□□□□□ -0.46
CAPN1-213ENST00000527897 MXD1Q05195 221 aa12.2□□□□□ -0.46
CAPN1-213ENST00000527897 C5orf64Q2M2E5 130 aa12.2□□□□□ -0.46
CAPN1-213ENST00000527897 IGSF11Q5DX21 431 aa12.2□□□□□ -0.46
CAPN1-213ENST00000527897 KPRPQ5T749 579 aaPredicted RBP12.2□□□□□ -0.46
CAPN1-213ENST00000527897 ZNF695Q8IW36 515 aa12.2□□□□□ -0.46
CAPN1-213ENST00000527897 WFDC9Q8NEX5 89 aa12.2□□□□□ -0.46
CAPN1-213ENST00000527897 OR4A4PQ8NGN8 299 aa12.2□□□□□ -0.46
CAPN1-213ENST00000527897 KCTD7Q96MP8 289 aa12.2□□□□□ -0.46
CAPN1-213ENST00000527897 AGMATQ9BSE5 352 aa12.2□□□□□ -0.46
CAPN1-213ENST00000527897 FBXL15Q9H469 300 aa12.2□□□□□ -0.46
CAPN1-213ENST00000527897 RNF167Q9H6Y7 350 aa12.2□□□□□ -0.46
CAPN1-213ENST00000527897 RBM7Q9Y580 266 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms