RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 TNFSF4P23510 183 aa10.66□□□□□ -0.7
TSKU-203ENST00000527881 ZNF114Q8NC26 417 aa10.66□□□□□ -0.7
TSKU-203ENST00000527881 UBALD1Q8TB05 177 aa10.66□□□□□ -0.7
TSKU-203ENST00000527881 ZNF501Q96CX3 271 aaPredicted RBP10.66□□□□□ -0.7
TSKU-203ENST00000527881 OXGR1Q96P68 337 aa10.66□□□□□ -0.7
TSKU-203ENST00000527881 MTIF3Q9H2K0 278 aaKnown RBP10.66□□□□□ -0.7
TSKU-203ENST00000527881 PLSCR2Q9NRY7 297 aa10.66□□□□□ -0.7
TSKU-203ENST00000527881 IGHV5-51A0A0C4DH38 117 aa10.65□□□□□ -0.7
TSKU-203ENST00000527881 A0A1W2PPV4 95 aa10.65□□□□□ -0.7
TSKU-203ENST00000527881 OR6C6A6NF89 314 aa10.65□□□□□ -0.7
TSKU-203ENST00000527881 HS3ST1O14792 307 aa10.65□□□□□ -0.7
TSKU-203ENST00000527881 PATE4P0C8F1 98 aa10.65□□□□□ -0.7
TSKU-203ENST00000527881 DRD1P21728 446 aa10.65□□□□□ -0.7
TSKU-203ENST00000527881 FBLP22087 321 aaKnown RBP10.65□□□□□ -0.7
TSKU-203ENST00000527881 Q6ZPA2 131 aa10.65□□□□□ -0.7
TSKU-203ENST00000527881 FAM58AQ8N1B3 248 aa10.65□□□□□ -0.7
TSKU-203ENST00000527881 ZNF611Q8N823 705 aa10.65□□□□□ -0.7
TSKU-203ENST00000527881 OR2M3Q8NG83 312 aa10.65□□□□□ -0.7
TSKU-203ENST00000527881 GPR27Q9NS67 375 aa10.65□□□□□ -0.7
TSKU-203ENST00000527881 TP53TG3Q9ULZ0 132 aa10.65□□□□□ -0.7
TSKU-203ENST00000527881 EFNA2O43921 213 aa10.65□□□□□ -0.7
TSKU-203ENST00000527881 SPINK2P20155 84 aa10.65□□□□□ -0.7
TSKU-203ENST00000527881 OTX2P32243 289 aa10.65□□□□□ -0.7
TSKU-203ENST00000527881 SLC35B1P78383 322 aa10.65□□□□□ -0.7
TSKU-203ENST00000527881 CLEC2AQ6UVW9 174 aa10.65□□□□□ -0.7
TSKU-203ENST00000527881 MRGPRDQ8TDS7 321 aa10.65□□□□□ -0.7
TSKU-203ENST00000527881 CORO2AQ92828 525 aa10.65□□□□□ -0.7
TSKU-203ENST00000527881 ZPBPQ9BS86 351 aa10.65□□□□□ -0.7
TSKU-203ENST00000527881 GSX1Q9H4S2 264 aaPredicted RBP10.65□□□□□ -0.7
TSKU-203ENST00000527881 RNF114Q9Y508 228 aa10.65□□□□□ -0.7
TSKU-203ENST00000527881 NPIPA3F8WFD2 350 aa10.65□□□□□ -0.71
TSKU-203ENST00000527881 K7EP13 123 aa10.65□□□□□ -0.71
TSKU-203ENST00000527881 ZNF253O75346 499 aa10.65□□□□□ -0.71
TSKU-203ENST00000527881 SYNGR4O95473 234 aa10.65□□□□□ -0.71
TSKU-203ENST00000527881 NPPCP23582 126 aa10.65□□□□□ -0.71
TSKU-203ENST00000527881 CDC34P49427 236 aaPredicted RBP10.65□□□□□ -0.71
TSKU-203ENST00000527881 PLPPR5Q32ZL2 321 aa10.65□□□□□ -0.71
TSKU-203ENST00000527881 FAM69BQ5VUD6 431 aa10.65□□□□□ -0.71
TSKU-203ENST00000527881 RPP25Q9BUL9 199 aaKnown RBP10.65□□□□□ -0.71
TSKU-203ENST00000527881 ULBP2Q9BZM5 246 aa10.65□□□□□ -0.71
TSKU-203ENST00000527881 ZNF703Q9H7S9 590 aaPredicted RBP10.65□□□□□ -0.71
TSKU-203ENST00000527881 RANBP2P49792 3224 aaKnown RBP10.64□□□□□ -0.71
TSKU-203ENST00000527881 KIR2DS1A0A191URI9 304 aa10.64□□□□□ -0.71
TSKU-203ENST00000527881 DPRXA6NFQ7 191 aa10.64□□□□□ -0.71
TSKU-203ENST00000527881 FAM166BA8MTA8 275 aa10.64□□□□□ -0.71
TSKU-203ENST00000527881 WDR1O75083 606 aa10.64□□□□□ -0.71
TSKU-203ENST00000527881 COL9A1P20849 921 aa10.64□□□□□ -0.71
TSKU-203ENST00000527881 KIR2DS4P43632 304 aa10.64□□□□□ -0.71
TSKU-203ENST00000527881 GNB1P62873 340 aa10.64□□□□□ -0.71
TSKU-203ENST00000527881 FOXL1Q12952 345 aa10.64□□□□□ -0.71
TSKU-203ENST00000527881 KIR2DS1Q14954 304 aa10.64□□□□□ -0.71
TSKU-203ENST00000527881 ZNF295-AS1Q8N0V1 137 aa10.64□□□□□ -0.71
TSKU-203ENST00000527881 FAM19A2Q8N3H0 131 aa10.64□□□□□ -0.71
TSKU-203ENST00000527881 OR56B2PQ8NGI1 322 aa10.64□□□□□ -0.71
TSKU-203ENST00000527881 CPAMD8Q8IZJ3 1885 aa10.64□□□□□ -0.71
TSKU-203ENST00000527881 RBFOX2O43251 390 aaKnown RBP eCLIP10.64□□□□□ -0.71
TSKU-203ENST00000527881 TMEM144Q7Z5S9 345 aa10.64□□□□□ -0.71
TSKU-203ENST00000527881 GCNT2Q8N0V5 402 aa10.64□□□□□ -0.71
TSKU-203ENST00000527881 LRFN3Q9BTN0 628 aa10.64□□□□□ -0.71
TSKU-203ENST00000527881 CDH23Q9H251 3354 aa10.64□□□□□ -0.71
TSKU-203ENST00000527881 RNF212BA8MTL3 300 aa10.64□□□□□ -0.71
TSKU-203ENST00000527881 CD99P14209 185 aa10.64□□□□□ -0.71
TSKU-203ENST00000527881 TSPOP30536 169 aa10.64□□□□□ -0.71
TSKU-203ENST00000527881 LHX2P50458 406 aa10.64□□□□□ -0.71
TSKU-203ENST00000527881 OR4A47Q6IF82 309 aa10.64□□□□□ -0.71
TSKU-203ENST00000527881 IGHV2OR16-5A0A0B4J2B6 119 aa10.63□□□□□ -0.71
TSKU-203ENST00000527881 TUSC2O75896 110 aa10.63□□□□□ -0.71
TSKU-203ENST00000527881 WNT2P09544 360 aa10.63□□□□□ -0.71
TSKU-203ENST00000527881 TFF3Q07654 80 aa10.63□□□□□ -0.71
TSKU-203ENST00000527881 OR2D3Q8NGH3 330 aa10.63□□□□□ -0.71
TSKU-203ENST00000527881 GNB4Q9HAV0 340 aa10.63□□□□□ -0.71
TSKU-203ENST00000527881 TRAV38-1A0A0B4J264 116 aa10.63□□□□□ -0.71
TSKU-203ENST00000527881 PDE6DO43924 150 aa10.63□□□□□ -0.71
TSKU-203ENST00000527881 GPX1P07203 203 aa10.63□□□□□ -0.71
TSKU-203ENST00000527881 LINC00310P59036 64 aa10.63□□□□□ -0.71
TSKU-203ENST00000527881 HLA-BQ31612 363 aa10.63□□□□□ -0.71
TSKU-203ENST00000527881 STUMQ69YW2 141 aa10.63□□□□□ -0.71
TSKU-203ENST00000527881 LCN12Q6JVE5 192 aa10.63□□□□□ -0.71
TSKU-203ENST00000527881 RDH5Q92781 318 aa10.63□□□□□ -0.71
TSKU-203ENST00000527881 C10orf35Q96D05 121 aa10.63□□□□□ -0.71
TSKU-203ENST00000527881 NUDT11Q96G61 164 aa10.63□□□□□ -0.71
TSKU-203ENST00000527881 YLPM1P49750 1951 aaKnown RBP10.63□□□□□ -0.71
TSKU-203ENST00000527881 CA3P07451 260 aa10.62□□□□□ -0.71
TSKU-203ENST00000527881 GLB1P16278 677 aa10.62□□□□□ -0.71
TSKU-203ENST00000527881 GABRA2P47869 451 aa10.62□□□□□ -0.71
TSKU-203ENST00000527881 EDDM3BP56851 147 aa10.62□□□□□ -0.71
TSKU-203ENST00000527881 ACSF3Q4G176 576 aaPredicted RBP10.62□□□□□ -0.71
TSKU-203ENST00000527881 SPINK9Q5DT21 86 aa10.62□□□□□ -0.71
TSKU-203ENST00000527881 KMT5CQ86Y97 462 aa10.62□□□□□ -0.71
TSKU-203ENST00000527881 OR10P1Q8NGE3 313 aa10.62□□□□□ -0.71
TSKU-203ENST00000527881 APOBEC3DQ96AK3 386 aaPredicted RBP10.62□□□□□ -0.71
TSKU-203ENST00000527881 GTF3C1Q12789 2109 aa10.62□□□□□ -0.71
TSKU-203ENST00000527881 TMEM131Q92545 1883 aa10.62□□□□□ -0.71
TSKU-203ENST00000527881 DHHO43323 396 aa10.62□□□□□ -0.71
TSKU-203ENST00000527881 SLC25A6P12236 298 aa10.62□□□□□ -0.71
TSKU-203ENST00000527881 CCNOP22674 350 aa10.62□□□□□ -0.71
TSKU-203ENST00000527881 COMPP49747 757 aaPredicted RBP10.62□□□□□ -0.71
TSKU-203ENST00000527881 FUT6P51993 359 aa10.62□□□□□ -0.71
TSKU-203ENST00000527881 SYT13Q7L8C5 426 aa10.62□□□□□ -0.71
TSKU-203ENST00000527881 SPPL3Q8TCT6 385 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms