RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 HACD4Q5VWC8 232 aa10.66□□□□□ -0.7
CAPN1-209ENST00000527469 Q6ZS46 218 aa10.66□□□□□ -0.7
CAPN1-209ENST00000527469 ZNF833PQ6ZTB9 187 aa10.66□□□□□ -0.7
CAPN1-209ENST00000527469 MAFIPQ8WZ33 124 aa10.66□□□□□ -0.7
CAPN1-209ENST00000527469 ST6GALNAC5Q9BVH7 336 aa10.66□□□□□ -0.7
CAPN1-209ENST00000527469 MRPS26Q9BYN8 205 aaKnown RBP10.66□□□□□ -0.7
CAPN1-209ENST00000527469 C11orf54Q9H0W9 315 aaPredicted RBP10.66□□□□□ -0.7
CAPN1-209ENST00000527469 IFI27L2Q9H2X8 130 aa10.66□□□□□ -0.7
CAPN1-209ENST00000527469 RDH8Q9NYR8 311 aa10.66□□□□□ -0.7
CAPN1-209ENST00000527469 RBM7Q9Y580 266 aaKnown RBP10.66□□□□□ -0.7
CAPN1-209ENST00000527469 TRAV18A0A075B6X5 111 aa10.65□□□□□ -0.7
CAPN1-209ENST00000527469 TMEM235A6NFC5 223 aa10.65□□□□□ -0.7
CAPN1-209ENST00000527469 ZNF736B4DX44 427 aaPredicted RBP10.65□□□□□ -0.7
CAPN1-209ENST00000527469 ITGB1BP1O14713 200 aa10.65□□□□□ -0.7
CAPN1-209ENST00000527469 CSF1P09603 554 aa10.65□□□□□ -0.7
CAPN1-209ENST00000527469 GSTT2P0CG29 244 aa10.65□□□□□ -0.7
CAPN1-209ENST00000527469 GSTT2BP0CG30 244 aa10.65□□□□□ -0.7
CAPN1-209ENST00000527469 TGFBR1P36897 503 aa10.65□□□□□ -0.7
CAPN1-209ENST00000527469 RPS19P39019 145 aaKnown RBP10.65□□□□□ -0.7
CAPN1-209ENST00000527469 PNLIPRP3Q17RR3 467 aa10.65□□□□□ -0.7
CAPN1-209ENST00000527469 FAM71F2Q6NXP2 309 aa10.65□□□□□ -0.7
CAPN1-209ENST00000527469 TREML4Q6UXN2 200 aa10.65□□□□□ -0.7
CAPN1-209ENST00000527469 FOXRED2Q8IWF2 684 aa10.65□□□□□ -0.7
CAPN1-209ENST00000527469 C5orf56Q8N8D9 126 aa10.65□□□□□ -0.7
CAPN1-209ENST00000527469 OR5AU1Q8NGC0 362 aa10.65□□□□□ -0.7
CAPN1-209ENST00000527469 OR13F1Q8NGS4 319 aa10.65□□□□□ -0.7
CAPN1-209ENST00000527469 OR5H6Q8NGV6 325 aa10.65□□□□□ -0.7
CAPN1-209ENST00000527469 S100A16Q96FQ6 103 aaKnown RBP10.65□□□□□ -0.7
CAPN1-209ENST00000527469 ABHD14BQ96IU4 210 aa10.65□□□□□ -0.7
CAPN1-209ENST00000527469 ZNF251Q9BRH9 671 aa10.65□□□□□ -0.7
CAPN1-209ENST00000527469 PARP12Q9H0J9 701 aaKnown RBP10.65□□□□□ -0.7
CAPN1-209ENST00000527469 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.65□□□□□ -0.7
CAPN1-209ENST00000527469 RNF150Q9ULK6 438 aa10.65□□□□□ -0.7
CAPN1-209ENST00000527469 WNK1Q9H4A3 2382 aa10.65□□□□□ -0.71
CAPN1-209ENST00000527469 A0A0A6YYH2 397 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 IGKV1-6A0A0C4DH72 117 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 A6NJ64 397 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 H7C2Y5 167 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 DIRAS3O95661 229 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 AMY1AP04745 511 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 AMY2AP04746 511 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 CD28P10747 220 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 VBP1P61758 197 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 MMDQ15546 238 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 NSUN5P1Q3KNT7 163 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 RPL39P5Q59GN2 51 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 IGSF11Q5DX21 431 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 UBE2NLQ5JXB2 153 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 GPR141Q7Z602 305 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 SLC35E3Q7Z769 313 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 ODF3L1Q8IXM7 274 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 SAMD12Q8N8I0 201 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 OR4X2Q8NGF9 303 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 NUDCD2Q8WVJ2 157 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 NABP2Q9BQ15 211 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 DCSTAMPQ9H295 470 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 KIAA1456Q9P272 454 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 SPATA2Q9UM82 520 aa10.64□□□□□ -0.71
CAPN1-209ENST00000527469 TET2Q6N021 2002 aaPredicted RBP10.63□□□□□ -0.71
CAPN1-209ENST00000527469 VWFP04275 2813 aa10.63□□□□□ -0.71
CAPN1-209ENST00000527469 OR5H14A6NHG9 310 aa10.63□□□□□ -0.71
CAPN1-209ENST00000527469 KCNAB3O43448 404 aa10.63□□□□□ -0.71
CAPN1-209ENST00000527469 CTXN2P0C2S0 81 aa10.63□□□□□ -0.71
CAPN1-209ENST00000527469 OR8U9P0C7N5 309 aa10.63□□□□□ -0.71
CAPN1-209ENST00000527469 SMIM18P0DKX4 95 aa10.63□□□□□ -0.71
CAPN1-209ENST00000527469 MC5RP33032 325 aa10.63□□□□□ -0.71
CAPN1-209ENST00000527469 ACTBP60709 375 aa10.63□□□□□ -0.71
CAPN1-209ENST00000527469 NCS1P62166 190 aa10.63□□□□□ -0.71
CAPN1-209ENST00000527469 SLC35B1P78383 322 aa10.63□□□□□ -0.71
CAPN1-209ENST00000527469 SRSF7Q16629 238 aaKnown RBP eCLIP10.63□□□□□ -0.71
CAPN1-209ENST00000527469 KHDC1LQ5JSQ8 128 aa10.63□□□□□ -0.71
CAPN1-209ENST00000527469 FAM131AQ6UXB0 335 aa10.63□□□□□ -0.71
CAPN1-209ENST00000527469 Q8N6K4 173 aa10.63□□□□□ -0.71
CAPN1-209ENST00000527469 OR8U1Q8NH10 309 aa10.63□□□□□ -0.71
CAPN1-209ENST00000527469 FAM110DQ8TAY7 271 aaPredicted RBP10.63□□□□□ -0.71
CAPN1-209ENST00000527469 SLC25A46Q96AG3 418 aa10.63□□□□□ -0.71
CAPN1-209ENST00000527469 SLC25A38Q96DW6 304 aa10.63□□□□□ -0.71
CAPN1-209ENST00000527469 CABLES2Q9BTV7 478 aa10.63□□□□□ -0.71
CAPN1-209ENST00000527469 WNT10AQ9GZT5 417 aa10.63□□□□□ -0.71
CAPN1-209ENST00000527469 MMP27Q9H306 513 aa10.63□□□□□ -0.71
CAPN1-209ENST00000527469 LIN7CQ9NUP9 197 aaKnown RBP10.63□□□□□ -0.71
CAPN1-209ENST00000527469 ELF5Q9UKW6 265 aaPredicted RBP10.63□□□□□ -0.71
CAPN1-209ENST00000527469 TRBV6-7A0A0A0MS04 114 aa10.62□□□□□ -0.71
CAPN1-209ENST00000527469 TCRBV4S1A1TA0A5B7 111 aa10.62□□□□□ -0.71
CAPN1-209ENST00000527469 PSMB11A5LHX3 300 aa10.62□□□□□ -0.71
CAPN1-209ENST00000527469 M0R1X1 148 aa10.62□□□□□ -0.71
CAPN1-209ENST00000527469 APOA2P02652 100 aa10.62□□□□□ -0.71
CAPN1-209ENST00000527469 OPN1MWP04001 364 aa10.62□□□□□ -0.71
CAPN1-209ENST00000527469 TFAP2AP05549 437 aa10.62□□□□□ -0.71
CAPN1-209ENST00000527469 OPN1MW2P0DN77 364 aa10.62□□□□□ -0.71
CAPN1-209ENST00000527469 OPN1MW3P0DN78 364 aa10.62□□□□□ -0.71
CAPN1-209ENST00000527469 SOX6P35712 828 aa10.62□□□□□ -0.71
CAPN1-209ENST00000527469 ARPC4P59998 168 aa10.62□□□□□ -0.71
CAPN1-209ENST00000527469 CBX3Q13185 183 aa10.62□□□□□ -0.71
CAPN1-209ENST00000527469 PLGLAQ15195 96 aa10.62□□□□□ -0.71
CAPN1-209ENST00000527469 ZNF260Q3ZCT1 412 aa10.62□□□□□ -0.71
CAPN1-209ENST00000527469 GPR107Q5VW38 600 aa10.62□□□□□ -0.71
CAPN1-209ENST00000527469 Q6ZS49 121 aa10.62□□□□□ -0.71
CAPN1-209ENST00000527469 CHPT1Q8WUD6 406 aa10.62□□□□□ -0.71
CAPN1-209ENST00000527469 KCTD12Q96CX2 325 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms