RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 LY86O95711 162 aa11□□□□□ -0.65
CPSF1-201ENST00000526271 SERPINA2P20848 420 aa11□□□□□ -0.65
CPSF1-201ENST00000526271 VDAC1P21796 283 aa11□□□□□ -0.65
CPSF1-201ENST00000526271 BLVRBP30043 206 aaPredicted RBP11□□□□□ -0.65
CPSF1-201ENST00000526271 Q3ZCU0 254 aa11□□□□□ -0.65
CPSF1-201ENST00000526271 GPR141Q7Z602 305 aa11□□□□□ -0.65
CPSF1-201ENST00000526271 LRRTM1Q86UE6 522 aa11□□□□□ -0.65
CPSF1-201ENST00000526271 LYPD6Q86Y78 171 aa11□□□□□ -0.65
CPSF1-201ENST00000526271 ANKRD13BQ86YJ7 626 aa11□□□□□ -0.65
CPSF1-201ENST00000526271 CDH26Q8IXH8 852 aa11□□□□□ -0.65
CPSF1-201ENST00000526271 MINDY2Q8NBR6 621 aa11□□□□□ -0.65
CPSF1-201ENST00000526271 OR8H1Q8NGG4 311 aa11□□□□□ -0.65
CPSF1-201ENST00000526271 OR4K15Q8NH41 348 aa11□□□□□ -0.65
CPSF1-201ENST00000526271 CITED4Q96RK1 184 aa11□□□□□ -0.65
CPSF1-201ENST00000526271 GPER1Q99527 375 aa11□□□□□ -0.65
CPSF1-201ENST00000526271 NABP2Q9BQ15 211 aa11□□□□□ -0.65
CPSF1-201ENST00000526271 TM2D3Q9BRN9 247 aa11□□□□□ -0.65
CPSF1-201ENST00000526271 GON7Q9BXV9 100 aa11□□□□□ -0.65
CPSF1-201ENST00000526271 MRPL20Q9BYC9 149 aaKnown RBP11□□□□□ -0.65
CPSF1-201ENST00000526271 OR51J1Q9H342 316 aa11□□□□□ -0.65
CPSF1-201ENST00000526271 TMEM138Q9NPI0 162 aa11□□□□□ -0.65
CPSF1-201ENST00000526271 CKLFQ9UBR5 152 aa11□□□□□ -0.65
CPSF1-201ENST00000526271 IGHV4OR15-8A0A075B7B6 117 aa10.99□□□□□ -0.65
CPSF1-201ENST00000526271 A0A087WW49 117 aa10.99□□□□□ -0.65
CPSF1-201ENST00000526271 LANCL1O43813 399 aa10.99□□□□□ -0.65
CPSF1-201ENST00000526271 AIREO43918 545 aa10.99□□□□□ -0.65
CPSF1-201ENST00000526271 HLA-DRB1P01911 266 aa10.99□□□□□ -0.65
CPSF1-201ENST00000526271 HBZP02008 142 aa10.99□□□□□ -0.65
CPSF1-201ENST00000526271 OR8U8P0C7N1 319 aa10.99□□□□□ -0.65
CPSF1-201ENST00000526271 GP9P14770 177 aa10.99□□□□□ -0.65
CPSF1-201ENST00000526271 BDKRB2P30411 391 aa10.99□□□□□ -0.65
CPSF1-201ENST00000526271 RAB9AP51151 201 aa10.99□□□□□ -0.65
CPSF1-201ENST00000526271 INSL3P51460 131 aa10.99□□□□□ -0.65
CPSF1-201ENST00000526271 PPP3R1P63098 170 aa10.99□□□□□ -0.65
CPSF1-201ENST00000526271 TIMM50Q3ZCQ8 353 aa10.99□□□□□ -0.65
CPSF1-201ENST00000526271 C22orf42Q6IC83 251 aa10.99□□□□□ -0.65
CPSF1-201ENST00000526271 ADAMTSL5Q6ZMM2 481 aa10.99□□□□□ -0.65
CPSF1-201ENST00000526271 OR52L2PQ8NGH6 319 aa10.99□□□□□ -0.65
CPSF1-201ENST00000526271 CHCHD6Q9BRQ6 235 aa10.99□□□□□ -0.65
CPSF1-201ENST00000526271 CENPOQ9BU64 300 aa10.99□□□□□ -0.65
CPSF1-201ENST00000526271 TOLLIPQ9H0E2 274 aa10.99□□□□□ -0.65
CPSF1-201ENST00000526271 VSIG4Q9Y279 399 aa10.99□□□□□ -0.65
CPSF1-201ENST00000526271 SHISA3A0PJX4 238 aa10.98□□□□□ -0.65
CPSF1-201ENST00000526271 AIPO00170 330 aa10.98□□□□□ -0.65
CPSF1-201ENST00000526271 FCN1O00602 326 aa10.98□□□□□ -0.65
CPSF1-201ENST00000526271 OVOL1O14753 267 aa10.98□□□□□ -0.65
CPSF1-201ENST00000526271 MAS1P04201 325 aa10.98□□□□□ -0.65
CPSF1-201ENST00000526271 CALRP27797 417 aaKnown RBP10.98□□□□□ -0.65
CPSF1-201ENST00000526271 ZNF93P35789 620 aaPredicted RBP10.98□□□□□ -0.65
CPSF1-201ENST00000526271 OR3A3P47888 321 aa10.98□□□□□ -0.65
CPSF1-201ENST00000526271 ACTBP60709 375 aa10.98□□□□□ -0.65
CPSF1-201ENST00000526271 MMDQ15546 238 aa10.98□□□□□ -0.65
CPSF1-201ENST00000526271 MPV17LQ2QL34 196 aa10.98□□□□□ -0.65
CPSF1-201ENST00000526271 SLC22A6Q4U2R8 563 aa10.98□□□□□ -0.65
CPSF1-201ENST00000526271 MORN2Q502X0 79 aa10.98□□□□□ -0.65
CPSF1-201ENST00000526271 ATAD3CQ5T2N8 411 aa10.98□□□□□ -0.65
CPSF1-201ENST00000526271 DDI2Q5TDH0 399 aa10.98□□□□□ -0.65
CPSF1-201ENST00000526271 ACSM6Q6P461 480 aa10.98□□□□□ -0.65
CPSF1-201ENST00000526271 ARPC1AQ92747 370 aa10.98□□□□□ -0.65
CPSF1-201ENST00000526271 ZNF251Q9BRH9 671 aa10.98□□□□□ -0.65
CPSF1-201ENST00000526271 METTL9Q9H1A3 318 aa10.98□□□□□ -0.65
CPSF1-201ENST00000526271 GAB2Q9UQC2 676 aa10.98□□□□□ -0.65
CPSF1-201ENST00000526271 FRAS1Q86XX4 4008 aa10.97□□□□□ -0.65
CPSF1-201ENST00000526271 TRAV41A0A0B4J266 112 aa10.97□□□□□ -0.65
CPSF1-201ENST00000526271 LOC100506127A0A0U1RQW1 187 aa10.97□□□□□ -0.65
CPSF1-201ENST00000526271 NDUFA3O95167 84 aa10.97□□□□□ -0.65
CPSF1-201ENST00000526271 LYL1P12980 280 aa10.97□□□□□ -0.65
CPSF1-201ENST00000526271 CRIP2P52943 208 aaPredicted RBP10.97□□□□□ -0.65
CPSF1-201ENST00000526271 CTF1Q16619 201 aa10.97□□□□□ -0.65
CPSF1-201ENST00000526271 GPR107Q5VW38 600 aa10.97□□□□□ -0.65
CPSF1-201ENST00000526271 ZNF429Q86V71 674 aa10.97□□□□□ -0.65
CPSF1-201ENST00000526271 NKAIN3Q8N8D7 197 aa10.97□□□□□ -0.65
CPSF1-201ENST00000526271 NPBQ8NG41 125 aa10.97□□□□□ -0.65
CPSF1-201ENST00000526271 GFI1Q99684 422 aa10.97□□□□□ -0.65
CPSF1-201ENST00000526271 NAA50Q9GZZ1 169 aaKnown RBP10.97□□□□□ -0.65
CPSF1-201ENST00000526271 RNF167Q9H6Y7 350 aa10.97□□□□□ -0.65
CPSF1-201ENST00000526271 PARP11Q9NR21 331 aa10.97□□□□□ -0.65
CPSF1-201ENST00000526271 MBNL3Q9NUK0 354 aaKnown RBP10.97□□□□□ -0.65
CPSF1-201ENST00000526271 C19orf73Q9NVV2 129 aa10.97□□□□□ -0.65
CPSF1-201ENST00000526271 TXNL1O43396 289 aa10.96□□□□□ -0.65
CPSF1-201ENST00000526271 SAP30O75446 220 aa10.96□□□□□ -0.65
CPSF1-201ENST00000526271 GABARAPO95166 117 aa10.96□□□□□ -0.65
CPSF1-201ENST00000526271 PPP1CCP36873 323 aaKnown RBP10.96□□□□□ -0.65
CPSF1-201ENST00000526271 PSMD7P51665 324 aa10.96□□□□□ -0.65
CPSF1-201ENST00000526271 C5orf64Q2M2E5 130 aa10.96□□□□□ -0.65
CPSF1-201ENST00000526271 C1orf100Q5SVJ3 147 aa10.96□□□□□ -0.65
CPSF1-201ENST00000526271 ZNF833PQ6ZTB9 187 aa10.96□□□□□ -0.65
CPSF1-201ENST00000526271 LINC00596Q86U02 117 aa10.96□□□□□ -0.65
CPSF1-201ENST00000526271 TPRA1Q86W33 373 aa10.96□□□□□ -0.65
CPSF1-201ENST00000526271 PRR18Q8N4B5 295 aa10.96□□□□□ -0.65
CPSF1-201ENST00000526271 MRPL30Q8TCC3 161 aaKnown RBP10.96□□□□□ -0.65
CPSF1-201ENST00000526271 PARP12Q9H0J9 701 aaKnown RBP10.96□□□□□ -0.65
CPSF1-201ENST00000526271 IFI27L2Q9H2X8 130 aa10.96□□□□□ -0.65
CPSF1-201ENST00000526271 GNG12Q9UBI6 72 aa10.96□□□□□ -0.65
CPSF1-201ENST00000526271 AK6Q9Y3D8 172 aaKnown RBP10.96□□□□□ -0.65
CPSF1-201ENST00000526271 PDCD5O14737 125 aa10.95□□□□□ -0.66
CPSF1-201ENST00000526271 MYL9P24844 172 aa10.95□□□□□ -0.66
CPSF1-201ENST00000526271 IL3RAP26951 378 aa10.95□□□□□ -0.66
CPSF1-201ENST00000526271 TGFBR1P36897 503 aa10.95□□□□□ -0.66
CPSF1-201ENST00000526271 TMBIM6P55061 237 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms