RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 IDO1P14902 403 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 CTLA4P16410 223 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 GPX2P18283 190 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 GLRA1P23415 457 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 IL3RAP26951 378 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 AQP1P29972 269 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 CHI3L1P36222 383 aaPredicted RBP1.02□□□□□ -2.25
CD44-212ENST00000524922 MDH1P40925 334 aaKnown RBP1.02□□□□□ -2.25
CD44-212ENST00000524922 MFAP2P55001 183 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 AQP5P55064 265 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 RGS8P57771 180 aaPredicted RBP1.02□□□□□ -2.25
CD44-212ENST00000524922 ACTA2P62736 377 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 ACTG2P63267 376 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 ACTC1P68032 377 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 ACTA1P68133 377 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 FAM3AP98173 230 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 CD47Q08722 323 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 BNIP2Q12982 314 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 KLRD1Q13241 179 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 GK3PQ14409 553 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 ZNF273Q14593 569 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 OR1Q1Q15612 314 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 SYPL1Q16563 259 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 C17orf58Q2M2W7 97 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 RSPO1Q2MKA7 263 aaPredicted RBP1.02□□□□□ -2.25
CD44-212ENST00000524922 TDRG1Q3Y452 100 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 MUC21Q5SSG8 566 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 LDLRAD2Q5SZI1 272 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 AGBL2Q5U5Z8 902 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 PRAMEF6Q5VXH4 476 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 SLX4IPQ5VYV7 408 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 LPCAT4Q643R3 524 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 TMEM42Q69YG0 159 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 REEP3Q6NUK4 255 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 RPL13AP3Q6NVV1 102 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 TTC33Q6PID6 262 aaPredicted RBP1.02□□□□□ -2.25
CD44-212ENST00000524922 DHRS11Q6UWP2 260 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 HACD2Q6Y1H2 254 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 DPY19L2P2Q6ZN68 376 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 Q6ZVQ6 151 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 TCF23Q7RTU1 214 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 DPY19L4Q7Z388 723 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 KRT77Q7Z794 578 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 WDR86Q86TI4 376 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 ZDHHC21Q8IVQ6 265 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 TIGD4Q8IY51 512 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 OFCC1Q8IZS5 231 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 RDH10Q8IZV5 341 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 CENPSQ8N2Z9 138 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 C6orf223Q8N319 242 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 RNF148Q8N7C7 305 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 YIPF7Q8N8F6 280 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 Q8N9W7 124 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 FNDC5Q8NAU1 212 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 ICA1LQ8NDH6 482 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 TMEM104Q8NE00 496 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 OR4A15Q8NGL6 344 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 OR1B1Q8NGR6 318 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 OR8S1Q8NH09 359 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 AKR7LQ8NHP1 331 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 UBALD1Q8TB05 177 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 TWIST2Q8WVJ9 160 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 RNF133Q8WVZ7 376 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 AQP3Q92482 292 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 SLC7A6Q92536 515 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 ARPC1AQ92747 370 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 RORBQ92753 470 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 GHSRQ92847 366 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 DLX4Q92988 240 aaPredicted RBP1.02□□□□□ -2.25
CD44-212ENST00000524922 RPEQ96AT9 228 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 GALNT14Q96FL9 552 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 CHMP6Q96FZ7 201 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 RSRC1Q96IZ7 334 aaKnown RBP1.02□□□□□ -2.25
CD44-212ENST00000524922 KCTD7Q96MP8 289 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 OR8B4Q96RC9 309 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 PANX1Q96RD7 426 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 MBOAT4Q96T53 435 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 S1PR3Q99500 378 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 CCL13Q99616 98 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 SLC35A5Q9BS91 424 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 NDUFAF3Q9BU61 184 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 EMC6Q9BV81 110 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 COMMD4Q9H0A8 199 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 NSRP1Q9H0G5 558 aaKnown RBP1.02□□□□□ -2.25
CD44-212ENST00000524922 RAB17Q9H0T7 212 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 C1orf21Q9H246 121 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 SRD5A3Q9H8P0 318 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 TPT1P8Q9HAU6 139 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 GRPEL1Q9HAV7 217 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 MID1IP1Q9NPA3 183 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 SLC2A9Q9NRM0 540 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 C19orf12Q9NSK7 152 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 SMPD3Q9NY59 655 aaPredicted RBP1.02□□□□□ -2.25
CD44-212ENST00000524922 THYN1Q9P016 225 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 SNX12Q9UMY4 172 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 FOXA2Q9Y261 457 aaPredicted RBP1.02□□□□□ -2.25
CD44-212ENST00000524922 TMEM5Q9Y2B1 443 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 AP3M1Q9Y2T2 418 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 LHFPL6Q9Y693 200 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 CDH10Q9Y6N8 788 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms