RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 SHISA2Q6UWI4 295 aa13.3□□□□□ -0.28
CSGALNACT1-216ENST00000524213 TMEM219Q86XT9 240 aa13.3□□□□□ -0.28
CSGALNACT1-216ENST00000524213 OR56B4Q8NH76 319 aa13.3□□□□□ -0.28
CSGALNACT1-216ENST00000524213 RBM14Q96PK6 669 aaKnown RBP13.3□□□□□ -0.28
CSGALNACT1-216ENST00000524213 S1PR3Q99500 378 aa13.3□□□□□ -0.28
CSGALNACT1-216ENST00000524213 GINS4Q9BRT9 223 aa13.3□□□□□ -0.28
CSGALNACT1-216ENST00000524213 SLC25A33Q9BSK2 321 aa13.3□□□□□ -0.28
CSGALNACT1-216ENST00000524213 RDH8Q9NYR8 311 aa13.3□□□□□ -0.28
CSGALNACT1-216ENST00000524213 TRBV6-7A0A0A0MS04 114 aa13.29□□□□□ -0.28
CSGALNACT1-216ENST00000524213 M0QZK8 103 aa13.29□□□□□ -0.28
CSGALNACT1-216ENST00000524213 BET1O15155 118 aa13.29□□□□□ -0.28
CSGALNACT1-216ENST00000524213 ST8SIA5O15466 376 aa13.29□□□□□ -0.28
CSGALNACT1-216ENST00000524213 CHST1O43916 411 aa13.29□□□□□ -0.28
CSGALNACT1-216ENST00000524213 SSX5O60225 188 aa13.29□□□□□ -0.28
CSGALNACT1-216ENST00000524213 TMEM11P17152 192 aa13.29□□□□□ -0.28
CSGALNACT1-216ENST00000524213 CD24P25063 80 aa13.29□□□□□ -0.28
CSGALNACT1-216ENST00000524213 TAS2R20P59543 309 aa13.29□□□□□ -0.28
CSGALNACT1-216ENST00000524213 HES1Q14469 280 aa13.29□□□□□ -0.28
CSGALNACT1-216ENST00000524213 SPCS2Q15005 226 aa13.29□□□□□ -0.28
CSGALNACT1-216ENST00000524213 HERPUD1Q15011 391 aa13.29□□□□□ -0.28
CSGALNACT1-216ENST00000524213 IGSF11Q5DX21 431 aa13.29□□□□□ -0.28
CSGALNACT1-216ENST00000524213 CNIH2Q6PI25 160 aa13.29□□□□□ -0.28
CSGALNACT1-216ENST00000524213 C11orf88Q6PI97 169 aa13.29□□□□□ -0.28
CSGALNACT1-216ENST00000524213 ODF3L1Q8IXM7 274 aa13.29□□□□□ -0.28
CSGALNACT1-216ENST00000524213 LINC01006Q8NI28 216 aa13.29□□□□□ -0.28
CSGALNACT1-216ENST00000524213 PRSS22Q9GZN4 317 aa13.29□□□□□ -0.28
CSGALNACT1-216ENST00000524213 C11orf54Q9H0W9 315 aaPredicted RBP13.29□□□□□ -0.28
CSGALNACT1-216ENST00000524213 IFI27L2Q9H2X8 130 aa13.29□□□□□ -0.28
CSGALNACT1-216ENST00000524213 ZNF221Q9UK13 617 aa13.29□□□□□ -0.28
CSGALNACT1-216ENST00000524213 FAM25AB3EWG3 89 aa13.28□□□□□ -0.28
CSGALNACT1-216ENST00000524213 FAM25CB3EWG5 89 aa13.28□□□□□ -0.28
CSGALNACT1-216ENST00000524213 FAM25GB3EWG6 89 aa13.28□□□□□ -0.28
CSGALNACT1-216ENST00000524213 IGKV1D-33P01593 117 aa13.28□□□□□ -0.28
CSGALNACT1-216ENST00000524213 IGKV1-33P01594 117 aa13.28□□□□□ -0.28
CSGALNACT1-216ENST00000524213 EIF4EP06730 217 aaKnown RBP13.28□□□□□ -0.28
CSGALNACT1-216ENST00000524213 EBI3Q14213 229 aa13.28□□□□□ -0.28
CSGALNACT1-216ENST00000524213 ZNF833PQ6ZTB9 187 aa13.28□□□□□ -0.28
CSGALNACT1-216ENST00000524213 HOGA1Q86XE5 327 aa13.28□□□□□ -0.28
CSGALNACT1-216ENST00000524213 OR2T10Q8NGZ9 312 aa13.28□□□□□ -0.28
CSGALNACT1-216ENST00000524213 OR2T6Q8NHC8 308 aa13.28□□□□□ -0.28
CSGALNACT1-216ENST00000524213 WFDC12Q8WWY7 111 aa13.28□□□□□ -0.28
CSGALNACT1-216ENST00000524213 ISOC1Q96CN7 298 aa13.28□□□□□ -0.28
CSGALNACT1-216ENST00000524213 CCDC59Q9P031 241 aaKnown RBP13.28□□□□□ -0.28
CSGALNACT1-216ENST00000524213 ANXA10Q9UJ72 324 aa13.28□□□□□ -0.28
CSGALNACT1-216ENST00000524213 ADAM30Q9UKF2 790 aa13.28□□□□□ -0.28
CSGALNACT1-216ENST00000524213 RNF114Q9Y508 228 aa13.28□□□□□ -0.28
CSGALNACT1-216ENST00000524213 PKD1L1Q8TDX9 2849 aa13.27□□□□□ -0.28
CSGALNACT1-216ENST00000524213 SAA2-SAA4A0A096LPE2 208 aa13.27□□□□□ -0.29
CSGALNACT1-216ENST00000524213 HPGDSO60760 199 aa13.27□□□□□ -0.29
CSGALNACT1-216ENST00000524213 SAA2P0DJI9 122 aaPredicted RBP13.27□□□□□ -0.29
CSGALNACT1-216ENST00000524213 SRSF4Q08170 494 aaKnown RBP13.27□□□□□ -0.29
CSGALNACT1-216ENST00000524213 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.27□□□□□ -0.29
CSGALNACT1-216ENST00000524213 BEST4Q8NFU0 473 aa13.27□□□□□ -0.29
CSGALNACT1-216ENST00000524213 AGMATQ9BSE5 352 aa13.27□□□□□ -0.29
CSGALNACT1-216ENST00000524213 GAB2Q9UQC2 676 aa13.27□□□□□ -0.29
CSGALNACT1-216ENST00000524213 MOB4Q9Y3A3 225 aa13.27□□□□□ -0.29
CSGALNACT1-216ENST00000524213 RBM7Q9Y580 266 aaKnown RBP13.27□□□□□ -0.29
CSGALNACT1-216ENST00000524213 CEPT1Q9Y6K0 416 aa13.27□□□□□ -0.29
CSGALNACT1-216ENST00000524213 IGKV1D-8A0A087WSZ0 117 aa13.26□□□□□ -0.29
CSGALNACT1-216ENST00000524213 IGHV3-72A0A0B4J1Y9 119 aa13.26□□□□□ -0.29
CSGALNACT1-216ENST00000524213 CCDC160A6NGH7 325 aa13.26□□□□□ -0.29
CSGALNACT1-216ENST00000524213 H3BMQ9 156 aa13.26□□□□□ -0.29
CSGALNACT1-216ENST00000524213 TPPPO94811 219 aa13.26□□□□□ -0.29
CSGALNACT1-216ENST00000524213 MOSP00540 346 aa13.26□□□□□ -0.29
CSGALNACT1-216ENST00000524213 ELK1P19419 428 aa13.26□□□□□ -0.29
CSGALNACT1-216ENST00000524213 PRSS3P35030 304 aa13.26□□□□□ -0.29
CSGALNACT1-216ENST00000524213 GPR12P47775 334 aa13.26□□□□□ -0.29
CSGALNACT1-216ENST00000524213 ARPC4P59998 168 aa13.26□□□□□ -0.29
CSGALNACT1-216ENST00000524213 LSAMPQ13449 338 aa13.26□□□□□ -0.29
CSGALNACT1-216ENST00000524213 H1FOOQ8IZA3 346 aaPredicted RBP13.26□□□□□ -0.29
CSGALNACT1-216ENST00000524213 Q8N2B8 174 aa13.26□□□□□ -0.29
CSGALNACT1-216ENST00000524213 SGMS2Q8NHU3 365 aa13.26□□□□□ -0.29
CSGALNACT1-216ENST00000524213 DYNC2LI1Q8TCX1 351 aa13.26□□□□□ -0.29
CSGALNACT1-216ENST00000524213 C15orf40Q8WUR7 153 aa13.26□□□□□ -0.29
CSGALNACT1-216ENST00000524213 NABP2Q9BQ15 211 aa13.26□□□□□ -0.29
CSGALNACT1-216ENST00000524213 PARP12Q9H0J9 701 aaKnown RBP13.26□□□□□ -0.29
CSGALNACT1-216ENST00000524213 IFT46Q9NQC8 304 aa13.26□□□□□ -0.29
CSGALNACT1-216ENST00000524213 FGF16O43320 207 aa13.25□□□□□ -0.29
CSGALNACT1-216ENST00000524213 OR3A3P47888 321 aa13.25□□□□□ -0.29
CSGALNACT1-216ENST00000524213 PROK1P58294 105 aa13.25□□□□□ -0.29
CSGALNACT1-216ENST00000524213 KRTAP10-3P60369 221 aa13.25□□□□□ -0.29
CSGALNACT1-216ENST00000524213 ARSJQ5FYB0 599 aaPredicted RBP13.25□□□□□ -0.29
CSGALNACT1-216ENST00000524213 OR8H1Q8NGG4 311 aa13.25□□□□□ -0.29
CSGALNACT1-216ENST00000524213 ABHD14BQ96IU4 210 aa13.25□□□□□ -0.29
CSGALNACT1-216ENST00000524213 EAF1Q96JC9 268 aaPredicted RBP13.25□□□□□ -0.29
CSGALNACT1-216ENST00000524213 MRPL20Q9BYC9 149 aaKnown RBP13.25□□□□□ -0.29
CSGALNACT1-216ENST00000524213 ZNF702PQ9H963 129 aa13.25□□□□□ -0.29
CSGALNACT1-216ENST00000524213 MRPS7Q9Y2R9 242 aaKnown RBP13.25□□□□□ -0.29
CSGALNACT1-216ENST00000524213 SULT1C2O00338 296 aa13.24□□□□□ -0.29
CSGALNACT1-216ENST00000524213 RGS5O15539 181 aa13.24□□□□□ -0.29
CSGALNACT1-216ENST00000524213 HLA-DQB1P01920 261 aa13.24□□□□□ -0.29
CSGALNACT1-216ENST00000524213 OR8U9P0C7N5 309 aa13.24□□□□□ -0.29
CSGALNACT1-216ENST00000524213 PTHLHP12272 177 aa13.24□□□□□ -0.29
CSGALNACT1-216ENST00000524213 MC5RP33032 325 aa13.24□□□□□ -0.29
CSGALNACT1-216ENST00000524213 HNF4GQ14541 408 aa13.24□□□□□ -0.29
CSGALNACT1-216ENST00000524213 RPL39P5Q59GN2 51 aa13.24□□□□□ -0.29
CSGALNACT1-216ENST00000524213 GVQW1Q8N7I0 195 aa13.24□□□□□ -0.29
CSGALNACT1-216ENST00000524213 OR8U1Q8NH10 309 aa13.24□□□□□ -0.29
CSGALNACT1-216ENST00000524213 ZNF251Q9BRH9 671 aa13.24□□□□□ -0.29
CSGALNACT1-216ENST00000524213 OR2D2Q9H210 308 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms