RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 HLA-DMAP28067 261 aa2.34□□□□□ -2.03
HMGB1P1-201ENST00000522557 EMP2P54851 167 aa2.34□□□□□ -2.03
HMGB1P1-201ENST00000522557 FOXA1P55317 472 aa2.34□□□□□ -2.03
HMGB1P1-201ENST00000522557 RAB8AP61006 207 aa2.34□□□□□ -2.03
HMGB1P1-201ENST00000522557 RHOAP61586 193 aa2.34□□□□□ -2.03
HMGB1P1-201ENST00000522557 TMEM31Q5JXX7 168 aa2.34□□□□□ -2.03
HMGB1P1-201ENST00000522557 ELP2Q6IA86 826 aa2.34□□□□□ -2.03
HMGB1P1-201ENST00000522557 DNAJB3Q8WWF6 145 aa2.34□□□□□ -2.03
HMGB1P1-201ENST00000522557 ZNF514Q96K75 400 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P1-201ENST00000522557 ZNF729A6NN14 1252 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 SLC31A1O15431 190 aa2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 AQP9O43315 295 aa2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 PDYNP01213 254 aa2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 LTAP01374 205 aa2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 IGKV1D-33P01593 117 aa2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 IGKV1-33P01594 117 aa2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 SCGB1C2P0DMR2 95 aa2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 NUDT2P50583 147 aa2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 UBE2G2P60604 165 aa2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 LAIR2Q6ISS4 152 aa2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 FAM45BPQ6NSW5 357 aa2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 CRLF3Q8IUI8 442 aa2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 OR1P1Q8NH06 330 aa2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 SCGB1C1Q8TD33 95 aa2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 TWIST2Q8WVJ9 160 aa2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 CLDN23Q96B33 292 aa2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 REEP6Q96HR9 211 aa2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 SLC19A3Q9BZV2 496 aa2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 FBXL15Q9H469 300 aa2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 ZNF443Q9Y2A4 671 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 MUC6Q6W4X9 2439 aa2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 NID2Q14112 1375 aa2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 NUP98P52948 1817 aa2.33□□□□□ -2.04
HMGB1P1-201ENST00000522557 ANKRD26Q9UPS8 1709 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 ARFGEF2Q9Y6D5 1785 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 IGHV3OR15-7A0A075B7D8 119 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 C4orf51C9J302 202 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 F5H5K5 113 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 SNAP29O95721 258 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 RAB36O95755 333 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 ORM1P02763 201 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 HRES1P13985 223 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 GABRA1P14867 456 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 PYCR1P32322 319 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 INPP1P49441 399 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 ZNF83P51522 516 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 DLX6P56179 175 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 MAP3K7CLP57077 242 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 RPS11P62280 158 aaKnown RBP eCLIP2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 SKP1P63208 163 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 FMODQ06828 376 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 ZNHIT3Q15649 155 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 ZCWPW2Q504Y3 356 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 NXNL2Q5VZ03 156 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 VN1R4Q7Z5H5 301 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 SGPP2Q8IWX5 399 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 KRTCAP2Q8N6L1 136 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 LFNGQ8NES3 379 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 C2orf15Q8WU43 125 aaKnown RBP2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 ANAPC13Q9BS18 74 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 TSSK6Q9BXA6 273 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 ALX4Q9H161 411 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 NAGKQ9UJ70 344 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 POMPQ9Y244 141 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 CLUHO75153 1309 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 SDK2Q58EX2 2172 aa2.32□□□□□ -2.04
HMGB1P1-201ENST00000522557 SCN7AQ01118 1682 aa2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 BCORQ6W2J9 1755 aa2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 UBR2Q8IWV8 1755 aa2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 SCN9AQ15858 1988 aa2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 ADAP1O75689 374 aa2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 YEATS4O95619 227 aa2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 MP68P56378 58 aa2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 FLI1Q01543 452 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 MGAT3Q09327 533 aa2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 EXOC3L4Q17RC7 722 aa2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 C4orf26Q17RF5 130 aa2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 KRTAP25-1Q3LHN0 102 aa2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 IQCF2Q8IXL9 164 aa2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 BLIDQ8IZY5 108 aa2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 CASTOR1Q8WTX7 329 aa2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 CCDC12Q8WUD4 166 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 KCTD4Q8WVF5 259 aa2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 CMBLQ96DG6 245 aa2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 MBOAT7Q96N66 472 aa2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 OR2V2Q96R30 315 aa2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 CHST5Q9GZS9 411 aa2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 ZNF230Q9UIE0 474 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 BTRCQ9Y297 605 aa2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 NOSIPQ9Y314 301 aaKnown RBP2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 SSC5DA1L4H1 1573 aa2.31□□□□□ -2.04
HMGB1P1-201ENST00000522557 DOCK3Q8IZD9 2030 aa2.3□□□□□ -2.04
HMGB1P1-201ENST00000522557 RIF1Q5UIP0 2472 aaKnown RBP2.3□□□□□ -2.04
HMGB1P1-201ENST00000522557 OR6C70A6NIJ9 312 aa2.3□□□□□ -2.04
HMGB1P1-201ENST00000522557 PSIP1O75475 530 aaKnown RBP2.3□□□□□ -2.04
HMGB1P1-201ENST00000522557 IGHV3-53P01767 116 aa2.3□□□□□ -2.04
HMGB1P1-201ENST00000522557 EVI2BP34910 448 aa2.3□□□□□ -2.04
HMGB1P1-201ENST00000522557 PSMD7P51665 324 aa2.3□□□□□ -2.04
HMGB1P1-201ENST00000522557 DHRS2Q13268 280 aa2.3□□□□□ -2.04
HMGB1P1-201ENST00000522557 PAFAH1B3Q15102 231 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms