RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 DRAXINQ8NBI3 349 aaPredicted RBP9.07□□□□□ -0.96
VCAN-212ENST00000515397 OR10R2Q8NGX6 335 aa9.07□□□□□ -0.96
VCAN-212ENST00000515397 RASL11BQ9BPW5 248 aa9.07□□□□□ -0.96
VCAN-212ENST00000515397 ATG5Q9H1Y0 275 aa9.07□□□□□ -0.96
VCAN-212ENST00000515397 RIMS4Q9H426 269 aaPredicted RBP9.07□□□□□ -0.96
VCAN-212ENST00000515397 C12orf4Q9NQ89 552 aa9.07□□□□□ -0.96
VCAN-212ENST00000515397 DAPK2Q9UIK4 370 aa9.07□□□□□ -0.96
VCAN-212ENST00000515397 STUB1Q9UNE7 303 aa9.07□□□□□ -0.96
VCAN-212ENST00000515397 TRBV6-6A0A0A6YYG2 114 aa9.06□□□□□ -0.96
VCAN-212ENST00000515397 TRDCB7Z8K6 153 aa9.06□□□□□ -0.96
VCAN-212ENST00000515397 J3QRK9 145 aa9.06□□□□□ -0.96
VCAN-212ENST00000515397 RAB27BO00194 218 aa9.06□□□□□ -0.96
VCAN-212ENST00000515397 BET1O15155 118 aa9.06□□□□□ -0.96
VCAN-212ENST00000515397 IGHG2P01859 326 aa9.06□□□□□ -0.96
VCAN-212ENST00000515397 GSTT2P0CG29 244 aa9.06□□□□□ -0.96
VCAN-212ENST00000515397 GSTT2BP0CG30 244 aa9.06□□□□□ -0.96
VCAN-212ENST00000515397 CT45A6P0DMU7 189 aa9.06□□□□□ -0.96
VCAN-212ENST00000515397 CT45A5P0DMU8 189 aa9.06□□□□□ -0.96
VCAN-212ENST00000515397 CT45A7P0DMV0 189 aa9.06□□□□□ -0.96
VCAN-212ENST00000515397 PF4V1P10720 104 aa9.06□□□□□ -0.96
VCAN-212ENST00000515397 TGFBR1P36897 503 aa9.06□□□□□ -0.96
VCAN-212ENST00000515397 MMDQ15546 238 aa9.06□□□□□ -0.96
VCAN-212ENST00000515397 ZNF833PQ6ZTB9 187 aa9.06□□□□□ -0.96
VCAN-212ENST00000515397 OR4X2Q8NGF9 303 aa9.06□□□□□ -0.96
VCAN-212ENST00000515397 FCGR1BQ92637 280 aa9.06□□□□□ -0.96
VCAN-212ENST00000515397 ZNF251Q9BRH9 671 aa9.06□□□□□ -0.96
VCAN-212ENST00000515397 CENPOQ9BU64 300 aa9.06□□□□□ -0.96
VCAN-212ENST00000515397 ABCG5Q9H222 651 aa9.06□□□□□ -0.96
VCAN-212ENST00000515397 TSSC4Q9Y5U2 329 aaPredicted RBP9.06□□□□□ -0.96
VCAN-212ENST00000515397 PLXNB1O43157 2135 aa9.05□□□□□ -0.96
VCAN-212ENST00000515397 IGKV1D-8A0A087WSZ0 117 aa9.05□□□□□ -0.96
VCAN-212ENST00000515397 NOTOA8MTQ0 251 aa9.05□□□□□ -0.96
VCAN-212ENST00000515397 PROP1O75360 226 aa9.05□□□□□ -0.96
VCAN-212ENST00000515397 IGLL1P15814 213 aa9.05□□□□□ -0.96
VCAN-212ENST00000515397 CD36P16671 472 aa9.05□□□□□ -0.96
VCAN-212ENST00000515397 ZBTB25P24278 435 aa9.05□□□□□ -0.96
VCAN-212ENST00000515397 FGF9P31371 208 aaPredicted RBP9.05□□□□□ -0.96
VCAN-212ENST00000515397 ACTBP60709 375 aa9.05□□□□□ -0.96
VCAN-212ENST00000515397 CDNFQ49AH0 187 aa9.05□□□□□ -0.96
VCAN-212ENST00000515397 PDLIM3Q53GG5 364 aaPredicted RBP9.05□□□□□ -0.96
VCAN-212ENST00000515397 FAM131AQ6UXB0 335 aa9.05□□□□□ -0.96
VCAN-212ENST00000515397 MOB1BQ7L9L4 216 aa9.05□□□□□ -0.96
VCAN-212ENST00000515397 STPG2Q8N412 459 aa9.05□□□□□ -0.96
VCAN-212ENST00000515397 FAM71E2Q8N5Q1 922 aa9.05□□□□□ -0.96
VCAN-212ENST00000515397 OR4F17Q8NGA8 305 aa9.05□□□□□ -0.96
VCAN-212ENST00000515397 DUX3Q96PT4 197 aa9.05□□□□□ -0.96
VCAN-212ENST00000515397 OR4F4Q96R69 305 aa9.05□□□□□ -0.96
VCAN-212ENST00000515397 AGMATQ9BSE5 352 aa9.05□□□□□ -0.96
VCAN-212ENST00000515397 RDH8Q9NYR8 311 aa9.05□□□□□ -0.96
VCAN-212ENST00000515397 WSB1Q9Y6I7 421 aa9.05□□□□□ -0.96
VCAN-212ENST00000515397 MFNGO00587 321 aa9.04□□□□□ -0.96
VCAN-212ENST00000515397 RAB29O14966 203 aa9.04□□□□□ -0.96
VCAN-212ENST00000515397 FABP7O15540 132 aa9.04□□□□□ -0.96
VCAN-212ENST00000515397 TXNL1O43396 289 aa9.04□□□□□ -0.96
VCAN-212ENST00000515397 RPLP1P05386 114 aaKnown RBP9.04□□□□□ -0.96
VCAN-212ENST00000515397 FCGR3AP08637 254 aa9.04□□□□□ -0.96
VCAN-212ENST00000515397 HIST1H1DP16402 221 aaKnown RBP9.04□□□□□ -0.96
VCAN-212ENST00000515397 RAB6AP20340 208 aa9.04□□□□□ -0.96
VCAN-212ENST00000515397 GALP22466 123 aa9.04□□□□□ -0.96
VCAN-212ENST00000515397 SOX6P35712 828 aa9.04□□□□□ -0.96
VCAN-212ENST00000515397 LSM3P62310 102 aaKnown RBP9.04□□□□□ -0.96
VCAN-212ENST00000515397 MRPS15P82914 257 aaKnown RBP9.04□□□□□ -0.96
VCAN-212ENST00000515397 ARFRP1Q13795 201 aa9.04□□□□□ -0.96
VCAN-212ENST00000515397 LY6G6FQ5SQ64 297 aa9.04□□□□□ -0.96
VCAN-212ENST00000515397 FOXRED2Q8IWF2 684 aa9.04□□□□□ -0.96
VCAN-212ENST00000515397 OR5H6Q8NGV6 325 aa9.04□□□□□ -0.96
VCAN-212ENST00000515397 LGALS14Q8TCE9 139 aa9.04□□□□□ -0.96
VCAN-212ENST00000515397 CHPT1Q8WUD6 406 aa9.04□□□□□ -0.96
VCAN-212ENST00000515397 KCTD7Q96MP8 289 aa9.04□□□□□ -0.96
VCAN-212ENST00000515397 ST6GALNAC5Q9BVH7 336 aa9.04□□□□□ -0.96
VCAN-212ENST00000515397 LIN7CQ9NUP9 197 aaKnown RBP9.04□□□□□ -0.96
VCAN-212ENST00000515397 METTL21EPA6NDL7 271 aa9.03□□□□□ -0.96
VCAN-212ENST00000515397 NUDT19A8MXV4 375 aa9.03□□□□□ -0.96
VCAN-212ENST00000515397 G3V318 75 aa9.03□□□□□ -0.96
VCAN-212ENST00000515397 H0YJW9 148 aa9.03□□□□□ -0.96
VCAN-212ENST00000515397 H7C2Y5 167 aa9.03□□□□□ -0.96
VCAN-212ENST00000515397 FCN1O00602 326 aa9.03□□□□□ -0.96
VCAN-212ENST00000515397 PF4P02776 101 aa9.03□□□□□ -0.96
VCAN-212ENST00000515397 FCER2P06734 321 aa9.03□□□□□ -0.96
VCAN-212ENST00000515397 OR8U9P0C7N5 309 aa9.03□□□□□ -0.96
VCAN-212ENST00000515397 CD33P20138 364 aa9.03□□□□□ -0.96
VCAN-212ENST00000515397 TALDO1P37837 337 aa9.03□□□□□ -0.96
VCAN-212ENST00000515397 BEAN1Q3B7T3 259 aa9.03□□□□□ -0.96
VCAN-212ENST00000515397 KCTD21Q4G0X4 260 aa9.03□□□□□ -0.96
VCAN-212ENST00000515397 IDNKQ5T6J7 187 aa9.03□□□□□ -0.96
VCAN-212ENST00000515397 SAMD5Q5TGI4 173 aa9.03□□□□□ -0.96
VCAN-212ENST00000515397 SFXN4Q6P4A7 337 aa9.03□□□□□ -0.96
VCAN-212ENST00000515397 C8orf86Q6ZUL3 223 aa9.03□□□□□ -0.96
VCAN-212ENST00000515397 OR8U1Q8NH10 309 aa9.03□□□□□ -0.96
VCAN-212ENST00000515397 CLCC1Q96S66 551 aa9.03□□□□□ -0.96
VCAN-212ENST00000515397 FBXL15Q9H469 300 aa9.03□□□□□ -0.96
VCAN-212ENST00000515397 PIPOXQ9P0Z9 390 aa9.03□□□□□ -0.96
VCAN-212ENST00000515397 ZNF107Q9UII5 783 aaPredicted RBP9.03□□□□□ -0.96
VCAN-212ENST00000515397 TMEM235A6NFC5 223 aa9.02□□□□□ -0.97
VCAN-212ENST00000515397 AP4M1O00189 453 aa9.02□□□□□ -0.97
VCAN-212ENST00000515397 NBR2O15453 112 aa9.02□□□□□ -0.97
VCAN-212ENST00000515397 GSTP1P09211 210 aaKnown RBP9.02□□□□□ -0.97
VCAN-212ENST00000515397 RPL23AP62750 156 aaKnown RBP9.02□□□□□ -0.97
VCAN-212ENST00000515397 SLC35B1P78383 322 aa9.02□□□□□ -0.97
VCAN-212ENST00000515397 PNLIPRP3Q17RR3 467 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms