RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 OR4F4Q96R69 305 aa13.01□□□□□ -0.33
DDX41-213ENST00000512027 ZNF251Q9BRH9 671 aa13.01□□□□□ -0.33
DDX41-213ENST00000512027 CHCHD6Q9BRQ6 235 aa13.01□□□□□ -0.33
DDX41-213ENST00000512027 ABCG5Q9H222 651 aa13.01□□□□□ -0.33
DDX41-213ENST00000512027 LIN7CQ9NUP9 197 aaKnown RBP13.01□□□□□ -0.33
DDX41-213ENST00000512027 ELF5Q9UKW6 265 aaPredicted RBP13.01□□□□□ -0.33
DDX41-213ENST00000512027 TSSC4Q9Y5U2 329 aaPredicted RBP13.01□□□□□ -0.33
DDX41-213ENST00000512027 DNAH3Q8TD57 4116 aa13□□□□□ -0.33
DDX41-213ENST00000512027 NOTCH3Q9UM47 2321 aa13□□□□□ -0.33
DDX41-213ENST00000512027 MFNGO00587 321 aa13□□□□□ -0.33
DDX41-213ENST00000512027 HSPA12AO43301 675 aa13□□□□□ -0.33
DDX41-213ENST00000512027 FCGR3AP08637 254 aa13□□□□□ -0.33
DDX41-213ENST00000512027 GADD45AP24522 165 aa13□□□□□ -0.33
DDX41-213ENST00000512027 CEACAM6P40199 344 aa13□□□□□ -0.33
DDX41-213ENST00000512027 MXD1Q05195 221 aa13□□□□□ -0.33
DDX41-213ENST00000512027 MMDQ15546 238 aa13□□□□□ -0.33
DDX41-213ENST00000512027 KCTD21Q4G0X4 260 aa13□□□□□ -0.33
DDX41-213ENST00000512027 STPG2Q8N412 459 aa13□□□□□ -0.33
DDX41-213ENST00000512027 RASL11BQ9BPW5 248 aa13□□□□□ -0.33
DDX41-213ENST00000512027 C11orf54Q9H0W9 315 aaPredicted RBP13□□□□□ -0.33
DDX41-213ENST00000512027 ZNF230Q9UIE0 474 aaPredicted RBP13□□□□□ -0.33
DDX41-213ENST00000512027 DAPK2Q9UIK4 370 aa13□□□□□ -0.33
DDX41-213ENST00000512027 RNF150Q9ULK6 438 aa13□□□□□ -0.33
DDX41-213ENST00000512027 SSR3Q9UNL2 185 aa13□□□□□ -0.33
DDX41-213ENST00000512027 LOC100506127A0A0U1RQW1 187 aa12.99□□□□□ -0.33
DDX41-213ENST00000512027 NOTOA8MTQ0 251 aa12.99□□□□□ -0.33
DDX41-213ENST00000512027 PRB2P02812 416 aaPredicted RBP12.99□□□□□ -0.33
DDX41-213ENST00000512027 PF4V1P10720 104 aa12.99□□□□□ -0.33
DDX41-213ENST00000512027 SNRPBP14678 240 aaKnown RBP12.99□□□□□ -0.33
DDX41-213ENST00000512027 HIST1H1DP16402 221 aaKnown RBP12.99□□□□□ -0.33
DDX41-213ENST00000512027 RAB6AP20340 208 aa12.99□□□□□ -0.33
DDX41-213ENST00000512027 ZBTB25P24278 435 aa12.99□□□□□ -0.33
DDX41-213ENST00000512027 ACTBP60709 375 aa12.99□□□□□ -0.33
DDX41-213ENST00000512027 PDLIM3Q53GG5 364 aaPredicted RBP12.99□□□□□ -0.33
DDX41-213ENST00000512027 OXLD1Q5BKU9 147 aa12.99□□□□□ -0.33
DDX41-213ENST00000512027 FAM131AQ6UXB0 335 aa12.99□□□□□ -0.33
DDX41-213ENST00000512027 LCNL1Q6ZST4 164 aa12.99□□□□□ -0.33
DDX41-213ENST00000512027 CHPT1Q8WUD6 406 aa12.99□□□□□ -0.33
DDX41-213ENST00000512027 AGMATQ9BSE5 352 aa12.99□□□□□ -0.33
DDX41-213ENST00000512027 ATG5Q9H1Y0 275 aa12.99□□□□□ -0.33
DDX41-213ENST00000512027 TRDCB7Z8K6 153 aa12.98□□□□□ -0.33
DDX41-213ENST00000512027 CT45A6P0DMU7 189 aa12.98□□□□□ -0.33
DDX41-213ENST00000512027 CT45A5P0DMU8 189 aa12.98□□□□□ -0.33
DDX41-213ENST00000512027 CT45A7P0DMV0 189 aa12.98□□□□□ -0.33
DDX41-213ENST00000512027 CD36P16671 472 aa12.98□□□□□ -0.33
DDX41-213ENST00000512027 SDC2P34741 201 aa12.98□□□□□ -0.33
DDX41-213ENST00000512027 TGFBR1P36897 503 aa12.98□□□□□ -0.33
DDX41-213ENST00000512027 LINC00205P59089 165 aa12.98□□□□□ -0.33
DDX41-213ENST00000512027 MRPS15P82914 257 aaKnown RBP12.98□□□□□ -0.33
DDX41-213ENST00000512027 IGSF11Q5DX21 431 aa12.98□□□□□ -0.33
DDX41-213ENST00000512027 SAMD5Q5TGI4 173 aa12.98□□□□□ -0.33
DDX41-213ENST00000512027 FOXRED2Q8IWF2 684 aa12.98□□□□□ -0.33
DDX41-213ENST00000512027 LGALS14Q8TCE9 139 aa12.98□□□□□ -0.33
DDX41-213ENST00000512027 CENPOQ9BU64 300 aa12.98□□□□□ -0.33
DDX41-213ENST00000512027 PIPOXQ9P0Z9 390 aa12.98□□□□□ -0.33
DDX41-213ENST00000512027 MGAT4AQ9UM21 535 aa12.98□□□□□ -0.33
DDX41-213ENST00000512027 AP4M1O00189 453 aa12.97□□□□□ -0.33
DDX41-213ENST00000512027 RAB29O14966 203 aa12.97□□□□□ -0.33
DDX41-213ENST00000512027 BET1O15155 118 aa12.97□□□□□ -0.33
DDX41-213ENST00000512027 FABP7O15540 132 aa12.97□□□□□ -0.33
DDX41-213ENST00000512027 PROP1O75360 226 aa12.97□□□□□ -0.33
DDX41-213ENST00000512027 GSTT2P0CG29 244 aa12.97□□□□□ -0.33
DDX41-213ENST00000512027 GSTT2BP0CG30 244 aa12.97□□□□□ -0.33
DDX41-213ENST00000512027 RANBP1P43487 201 aa12.97□□□□□ -0.33
DDX41-213ENST00000512027 BEAN1Q3B7T3 259 aa12.97□□□□□ -0.33
DDX41-213ENST00000512027 SFXN4Q6P4A7 337 aa12.97□□□□□ -0.33
DDX41-213ENST00000512027 DRAXINQ8NBI3 349 aaPredicted RBP12.97□□□□□ -0.33
DDX41-213ENST00000512027 OR8H1Q8NGG4 311 aa12.97□□□□□ -0.33
DDX41-213ENST00000512027 KCTD7Q96MP8 289 aa12.97□□□□□ -0.33
DDX41-213ENST00000512027 RDH8Q9NYR8 311 aa12.97□□□□□ -0.33
DDX41-213ENST00000512027 IGKV1D-8A0A087WSZ0 117 aa12.96□□□□□ -0.33
DDX41-213ENST00000512027 METTL21EPA6NDL7 271 aa12.96□□□□□ -0.33
DDX41-213ENST00000512027 PF4P02776 101 aa12.96□□□□□ -0.33
DDX41-213ENST00000512027 SOX6P35712 828 aa12.96□□□□□ -0.33
DDX41-213ENST00000512027 RPL23AP62750 156 aaKnown RBP12.96□□□□□ -0.33
DDX41-213ENST00000512027 ARFRP1Q13795 201 aa12.96□□□□□ -0.33
DDX41-213ENST00000512027 FAM71F2Q6NXP2 309 aa12.96□□□□□ -0.33
DDX41-213ENST00000512027 TPRA1Q86W33 373 aa12.96□□□□□ -0.33
DDX41-213ENST00000512027 EDARADDQ8WWZ3 215 aa12.96□□□□□ -0.33
DDX41-213ENST00000512027 PTX4Q96A99 478 aa12.96□□□□□ -0.33
DDX41-213ENST00000512027 ZNF107Q9UII5 783 aaPredicted RBP12.96□□□□□ -0.33
DDX41-213ENST00000512027 H0YJW9 148 aa12.95□□□□□ -0.34
DDX41-213ENST00000512027 ITGB1BP1O14713 200 aa12.95□□□□□ -0.34
DDX41-213ENST00000512027 NBR2O15453 112 aa12.95□□□□□ -0.34
DDX41-213ENST00000512027 RPLP1P05386 114 aaKnown RBP12.95□□□□□ -0.34
DDX41-213ENST00000512027 IGLL1P15814 213 aa12.95□□□□□ -0.34
DDX41-213ENST00000512027 CD33P20138 364 aa12.95□□□□□ -0.34
DDX41-213ENST00000512027 SLC35B1P78383 322 aa12.95□□□□□ -0.34
DDX41-213ENST00000512027 CDNFQ49AH0 187 aa12.95□□□□□ -0.34
DDX41-213ENST00000512027 ETV3LQ6ZN32 361 aa12.95□□□□□ -0.34
DDX41-213ENST00000512027 C8orf86Q6ZUL3 223 aa12.95□□□□□ -0.34
DDX41-213ENST00000512027 OR4A4PQ8NGN8 299 aa12.95□□□□□ -0.34
DDX41-213ENST00000512027 OR5H6Q8NGV6 325 aa12.95□□□□□ -0.34
DDX41-213ENST00000512027 CABLES2Q9BTV7 478 aa12.95□□□□□ -0.34
DDX41-213ENST00000512027 H7C2Y5 167 aa12.94□□□□□ -0.34
DDX41-213ENST00000512027 C5orf64Q2M2E5 130 aa12.94□□□□□ -0.34
DDX41-213ENST00000512027 KLHL30-AS1Q8NEE0 82 aa12.94□□□□□ -0.34
DDX41-213ENST00000512027 NUDCD2Q8WVJ2 157 aa12.94□□□□□ -0.34
DDX41-213ENST00000512027 PHF21AQ96BD5 680 aa12.94□□□□□ -0.34
DDX41-213ENST00000512027 C5orf30Q96GV9 206 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 448.8 ms