RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 LOC100506127A0A0U1RQW1 187 aa12.75□□□□□ -0.37
PDLIM5-216ENST00000511767 TRIM64CA6NLI5 447 aa12.75□□□□□ -0.37
PDLIM5-216ENST00000511767 RAB29O14966 203 aa12.75□□□□□ -0.37
PDLIM5-216ENST00000511767 GSTT2P0CG29 244 aa12.75□□□□□ -0.37
PDLIM5-216ENST00000511767 GSTT2BP0CG30 244 aa12.75□□□□□ -0.37
PDLIM5-216ENST00000511767 SAA2P0DJI9 122 aaPredicted RBP12.75□□□□□ -0.37
PDLIM5-216ENST00000511767 CT45A6P0DMU7 189 aa12.75□□□□□ -0.37
PDLIM5-216ENST00000511767 CT45A5P0DMU8 189 aa12.75□□□□□ -0.37
PDLIM5-216ENST00000511767 CT45A7P0DMV0 189 aa12.75□□□□□ -0.37
PDLIM5-216ENST00000511767 MXD1Q05195 221 aa12.75□□□□□ -0.37
PDLIM5-216ENST00000511767 SRSF7Q16629 238 aaKnown RBP eCLIP12.75□□□□□ -0.37
PDLIM5-216ENST00000511767 SFXN4Q6P4A7 337 aa12.75□□□□□ -0.37
PDLIM5-216ENST00000511767 MEGF8Q7Z7M0 2845 aa12.75□□□□□ -0.37
PDLIM5-216ENST00000511767 YIPF6Q96EC8 236 aa12.75□□□□□ -0.37
PDLIM5-216ENST00000511767 ABHD14BQ96IU4 210 aa12.75□□□□□ -0.37
PDLIM5-216ENST00000511767 NOL4LQ96MY1 436 aaPredicted RBP12.75□□□□□ -0.37
PDLIM5-216ENST00000511767 MRPL20Q9BYC9 149 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-216ENST00000511767 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.75□□□□□ -0.372e-6■■■■□ 23
PDLIM5-216ENST00000511767 LIN7CQ9NUP9 197 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-216ENST00000511767 ZNF230Q9UIE0 474 aaPredicted RBP12.75□□□□□ -0.37
PDLIM5-216ENST00000511767 ELF5Q9UKW6 265 aaPredicted RBP12.75□□□□□ -0.37
PDLIM5-216ENST00000511767 RNF150Q9ULK6 438 aa12.75□□□□□ -0.37
PDLIM5-216ENST00000511767 A0A075B6Q4 140 aa12.74□□□□□ -0.37
PDLIM5-216ENST00000511767 SERPINE3A8MV23 424 aa12.74□□□□□ -0.37
PDLIM5-216ENST00000511767 HSPA12AO43301 675 aa12.74□□□□□ -0.37
PDLIM5-216ENST00000511767 TNFAIP8O95379 198 aa12.74□□□□□ -0.37
PDLIM5-216ENST00000511767 OPN1MWP04001 364 aa12.74□□□□□ -0.37
PDLIM5-216ENST00000511767 FCGR3AP08637 254 aa12.74□□□□□ -0.37
PDLIM5-216ENST00000511767 OPN1MW2P0DN77 364 aa12.74□□□□□ -0.37
PDLIM5-216ENST00000511767 OPN1MW3P0DN78 364 aa12.74□□□□□ -0.37
PDLIM5-216ENST00000511767 SNRPBP14678 240 aaKnown RBP12.74□□□□□ -0.37
PDLIM5-216ENST00000511767 RPL39P5Q59GN2 51 aa12.74□□□□□ -0.37
PDLIM5-216ENST00000511767 ZNF329Q86UD4 541 aa12.74□□□□□ -0.37
PDLIM5-216ENST00000511767 OR4A4PQ8NGN8 299 aa12.74□□□□□ -0.37
PDLIM5-216ENST00000511767 LINC00527Q9UJ94 153 aa12.74□□□□□ -0.37
PDLIM5-216ENST00000511767 TCRBV4S1A1TA0A5B7 111 aa12.73□□□□□ -0.37
PDLIM5-216ENST00000511767 FABP7O15540 132 aa12.73□□□□□ -0.37
PDLIM5-216ENST00000511767 GPR12P47775 334 aa12.73□□□□□ -0.37
PDLIM5-216ENST00000511767 MRPS15P82914 257 aaKnown RBP12.73□□□□□ -0.37
PDLIM5-216ENST00000511767 ARL6IP1Q15041 203 aa12.73□□□□□ -0.37
PDLIM5-216ENST00000511767 IGSF11Q5DX21 431 aa12.73□□□□□ -0.37
PDLIM5-216ENST00000511767 FAM71F2Q6NXP2 309 aa12.73□□□□□ -0.37
PDLIM5-216ENST00000511767 Q6ZS49 121 aa12.73□□□□□ -0.37
PDLIM5-216ENST00000511767 SLC35E3Q7Z769 313 aa12.73□□□□□ -0.37
PDLIM5-216ENST00000511767 FAM71E2Q8N5Q1 922 aa12.73□□□□□ -0.37
PDLIM5-216ENST00000511767 OR5H6Q8NGV6 325 aa12.73□□□□□ -0.37
PDLIM5-216ENST00000511767 CHPT1Q8WUD6 406 aa12.73□□□□□ -0.37
PDLIM5-216ENST00000511767 EDARADDQ8WWZ3 215 aa12.73□□□□□ -0.37
PDLIM5-216ENST00000511767 RASL11BQ9BPW5 248 aa12.73□□□□□ -0.37
PDLIM5-216ENST00000511767 RDH8Q9NYR8 311 aa12.73□□□□□ -0.37
PDLIM5-216ENST00000511767 GAB2Q9UQC2 676 aa12.73□□□□□ -0.37
PDLIM5-216ENST00000511767 IGKV1D-8A0A087WSZ0 117 aa12.72□□□□□ -0.37
PDLIM5-216ENST00000511767 TRBV6-7A0A0A0MS04 114 aa12.72□□□□□ -0.37
PDLIM5-216ENST00000511767 PSMB11A5LHX3 300 aa12.72□□□□□ -0.37
PDLIM5-216ENST00000511767 SERPINB10P48595 397 aa12.72□□□□□ -0.37
PDLIM5-216ENST00000511767 ACTBP60709 375 aa12.72□□□□□ -0.37
PDLIM5-216ENST00000511767 ARFRP1Q13795 201 aa12.72□□□□□ -0.37
PDLIM5-216ENST00000511767 KIR2DS1Q14954 304 aa12.72□□□□□ -0.37
PDLIM5-216ENST00000511767 ZNF260Q3ZCT1 412 aa12.72□□□□□ -0.37
PDLIM5-216ENST00000511767 NPBQ8NG41 125 aa12.72□□□□□ -0.37
PDLIM5-216ENST00000511767 OR5AN1Q8NGI8 311 aa12.72□□□□□ -0.37
PDLIM5-216ENST00000511767 MAFIPQ8WZ33 124 aa12.72□□□□□ -0.37
PDLIM5-216ENST00000511767 PHF21AQ96BD5 680 aa12.72□□□□□ -0.37
PDLIM5-216ENST00000511767 R3HDM4Q96D70 268 aa12.72□□□□□ -0.37
PDLIM5-216ENST00000511767 TSSC4Q9Y5U2 329 aaPredicted RBP12.72□□□□□ -0.37
PDLIM5-216ENST00000511767 DIRAS3O95661 229 aa12.71□□□□□ -0.37
PDLIM5-216ENST00000511767 CNTFRP26992 372 aa12.71□□□□□ -0.37
PDLIM5-216ENST00000511767 SOX6P35712 828 aa12.71□□□□□ -0.37
PDLIM5-216ENST00000511767 TGFBR1P36897 503 aa12.71□□□□□ -0.37
PDLIM5-216ENST00000511767 TALDO1P37837 337 aa12.71□□□□□ -0.37
PDLIM5-216ENST00000511767 RPS19P39019 145 aaKnown RBP12.71□□□□□ -0.37
PDLIM5-216ENST00000511767 SCAND1P57086 179 aa12.71□□□□□ -0.37
PDLIM5-216ENST00000511767 LINC00205P59089 165 aa12.71□□□□□ -0.37
PDLIM5-216ENST00000511767 IDNKQ5T6J7 187 aa12.71□□□□□ -0.37
PDLIM5-216ENST00000511767 HACD4Q5VWC8 232 aa12.71□□□□□ -0.37
PDLIM5-216ENST00000511767 STPG2Q8N412 459 aa12.71□□□□□ -0.37
PDLIM5-216ENST00000511767 WFDC9Q8NEX5 89 aa12.71□□□□□ -0.37
PDLIM5-216ENST00000511767 OR4F17Q8NGA8 305 aa12.71□□□□□ -0.37
PDLIM5-216ENST00000511767 OR4X2Q8NGF9 303 aa12.71□□□□□ -0.37
PDLIM5-216ENST00000511767 LGALS14Q8TCE9 139 aa12.71□□□□□ -0.37
PDLIM5-216ENST00000511767 OR4F4Q96R69 305 aa12.71□□□□□ -0.37
PDLIM5-216ENST00000511767 PLXNB1O43157 2135 aa12.71□□□□□ -0.38
PDLIM5-216ENST00000511767 AP4M1O00189 453 aa12.7□□□□□ -0.38
PDLIM5-216ENST00000511767 AIREO43918 545 aa12.7□□□□□ -0.38
PDLIM5-216ENST00000511767 TMEM127O75204 238 aa12.7□□□□□ -0.38
PDLIM5-216ENST00000511767 GSTP1P09211 210 aaKnown RBP12.7□□□□□ -0.38
PDLIM5-216ENST00000511767 MC5RP33032 325 aa12.7□□□□□ -0.38
PDLIM5-216ENST00000511767 DEFA6Q01524 100 aa12.7□□□□□ -0.38
PDLIM5-216ENST00000511767 TIMM50Q3ZCQ8 353 aa12.7□□□□□ -0.38
PDLIM5-216ENST00000511767 GLDNQ6ZMI3 551 aaPredicted RBP12.7□□□□□ -0.38
PDLIM5-216ENST00000511767 FOXRED2Q8IWF2 684 aa12.7□□□□□ -0.38
PDLIM5-216ENST00000511767 OR10J5Q8NHC4 309 aa12.7□□□□□ -0.38
PDLIM5-216ENST00000511767 HSPB9Q9BQS6 159 aa12.7□□□□□ -0.38
PDLIM5-216ENST00000511767 CABLES2Q9BTV7 478 aa12.7□□□□□ -0.38
PDLIM5-216ENST00000511767 ST6GALNAC5Q9BVH7 336 aa12.7□□□□□ -0.38
PDLIM5-216ENST00000511767 VCX3AQ9NNX9 186 aa12.7□□□□□ -0.38
PDLIM5-216ENST00000511767 RHBDL2Q9NX52 303 aa12.7□□□□□ -0.38
PDLIM5-216ENST00000511767 ZNF221Q9UK13 617 aa12.7□□□□□ -0.38
PDLIM5-216ENST00000511767 A0A1W2PRX2 142 aa12.69□□□□□ -0.38
PDLIM5-216ENST00000511767 H0YJW9 148 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms