RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 INO80CQ6PI98 192 aaPredicted RBP9.18□□□□□ -0.94
LIN54-207ENST00000508171 GALMQ96C23 342 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 OR4C12Q96R67 309 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 ZNF665Q9H7R5 613 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 METRNQ9UJH8 293 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 ZFP92A6NM28 416 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 C1QTNF9BB2RNN3 333 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 HSPB1P04792 205 aaKnown RBP9.17□□□□□ -0.94
LIN54-207ENST00000508171 CD55P08174 381 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 WT1P19544 449 aaPredicted RBP9.17□□□□□ -0.94
LIN54-207ENST00000508171 BRWD1-AS2P59051 145 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 UBE2KP61086 200 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 ZNF816Q0VGE8 651 aaPredicted RBP9.17□□□□□ -0.94
LIN54-207ENST00000508171 FABP9Q0Z7S8 132 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 FAM180AQ6UWF9 173 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 BTNL3Q6UXE8 466 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 WDR31Q8NA23 367 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 C9orf106Q8NAJ2 232 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 MRGPRDQ8TDS7 321 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 MUCL1Q96DR8 90 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 RBMXL1Q96E39 390 aaKnown RBP9.17□□□□□ -0.94
LIN54-207ENST00000508171 COQ2Q96H96 371 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 KCNIP1Q9NZI2 227 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 MMP24Q9Y5R2 645 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 URGCP-MRPS24S4R325 110 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 UBE2CO00762 179 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 IGKV3-15P01624 115 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 IGHG3P01860 377 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 HBZP02008 142 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 IL2RGP31785 369 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 GUSBP1Q15486 140 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 OR8G2PQ6IF36 304 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 DPPA3Q6W0C5 159 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 LILRB2Q8N423 598 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 HIPK2Q9H2X6 1198 aa9.17□□□□□ -0.94
LIN54-207ENST00000508171 UNKLQ9H9P5 680 aaKnown RBP9.17□□□□□ -0.94
LIN54-207ENST00000508171 PIGBOS1A0A0B4J2F0 54 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 TMEM30CPA0ZSE6 113 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 TMEM210A6NLX4 147 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 PTBP3O95758 552 aaKnown RBP9.16□□□□□ -0.94
LIN54-207ENST00000508171 HBE1P02100 147 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 NQO2P16083 231 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 CD200P41217 278 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 GABRA2P47869 451 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 GLIPR1P48060 266 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 CTAG1AP78358 180 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 LRRC75BQ2VPJ9 315 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 HEPN1Q6WQI6 88 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 ZNF645Q8N7E2 425 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 RFESDQ8TAC1 157 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 RBKSQ9H477 322 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 CACNA1GO43497 2377 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 IGHV3-43A0A0B4J1X8 118 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 TRAV1-1A0A0B4J248 108 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 LOC102723971A0A1B0GUV8 181 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 C17orf98A8MV24 154 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 DEFB108AA8MXU0 73 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 IGHV3-43DP0DP04 118 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 SSTR5P35346 364 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 RAB2AP61019 212 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 RPS16P62249 146 aaKnown RBP9.16□□□□□ -0.94
LIN54-207ENST00000508171 RAB11AP62491 216 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 TNFRSF9Q07011 255 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 KHDC3LQ587J8 217 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 WDR82Q6UXN9 313 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 ACP7Q6ZNF0 438 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 SLC16A13Q7RTY0 426 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 DCTN5Q9BTE1 182 aa9.16□□□□□ -0.94
LIN54-207ENST00000508171 PTPRBP23467 1997 aa9.15□□□□□ -0.94
LIN54-207ENST00000508171 OTOGLQ3ZCN5 2332 aa9.15□□□□□ -0.94
LIN54-207ENST00000508171 HCFC1P51610 2035 aa9.15□□□□□ -0.94
LIN54-207ENST00000508171 S1PR2O95136 353 aa9.15□□□□□ -0.94
LIN54-207ENST00000508171 CLDN1O95832 211 aa9.15□□□□□ -0.94
LIN54-207ENST00000508171 IGHV2-5P01817 119 aa9.15□□□□□ -0.94
LIN54-207ENST00000508171 CXCL1P09341 107 aa9.15□□□□□ -0.94
LIN54-207ENST00000508171 CECR9P0C854 216 aa9.15□□□□□ -0.94
LIN54-207ENST00000508171 MAS1LP35410 378 aa9.15□□□□□ -0.94
LIN54-207ENST00000508171 RPS10P46783 165 aaKnown RBP9.15□□□□□ -0.94
LIN54-207ENST00000508171 ELLP55199 621 aaPredicted RBP9.15□□□□□ -0.94
LIN54-207ENST00000508171 ERVFRD-1P60508 538 aa9.15□□□□□ -0.94
LIN54-207ENST00000508171 HBG1P69891 147 aa9.15□□□□□ -0.94
LIN54-207ENST00000508171 HBG2P69892 147 aa9.15□□□□□ -0.94
LIN54-207ENST00000508171 ZNF787Q6DD87 383 aa9.15□□□□□ -0.94
LIN54-207ENST00000508171 FIP1L1Q6UN15 594 aaKnown RBP9.15□□□□□ -0.94
LIN54-207ENST00000508171 MALSU1Q96EH3 234 aa9.15□□□□□ -0.94
LIN54-207ENST00000508171 TVP23CQ96ET8 276 aa9.15□□□□□ -0.94
LIN54-207ENST00000508171 RCC1LQ96I51 464 aaKnown RBP9.15□□□□□ -0.94
LIN54-207ENST00000508171 NIPSNAP3BQ9BS92 247 aa9.15□□□□□ -0.94
LIN54-207ENST00000508171 WDR61Q9GZS3 305 aaKnown RBP9.15□□□□□ -0.94
LIN54-207ENST00000508171 CLN8Q9UBY8 286 aa9.15□□□□□ -0.94
LIN54-207ENST00000508171 UBE2L5PA0A1B0GUS4 154 aa9.15□□□□□ -0.95
LIN54-207ENST00000508171 SPAARA0A1B0GVQ0 90 aa9.15□□□□□ -0.95
LIN54-207ENST00000508171 OOEPA6NGQ2 149 aa9.15□□□□□ -0.95
LIN54-207ENST00000508171 OR5H1A6NKK0 313 aa9.15□□□□□ -0.95
LIN54-207ENST00000508171 PPIHO43447 177 aaKnown RBP9.15□□□□□ -0.95
LIN54-207ENST00000508171 TIMM8AO60220 97 aaPredicted RBP9.15□□□□□ -0.95
LIN54-207ENST00000508171 OR8U8P0C7N1 319 aa9.15□□□□□ -0.95
LIN54-207ENST00000508171 HOXC12P31275 282 aa9.15□□□□□ -0.95
LIN54-207ENST00000508171 COL10A1Q03692 680 aa9.15□□□□□ -0.95
LIN54-207ENST00000508171 EIF4EBP1Q13541 118 aaPredicted RBP9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms