RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 ABHD14BQ96IU4 210 aa13.71□□□□□ -0.21
DDX41-207ENST00000507900 LPAR3Q9UBY5 353 aa13.71□□□□□ -0.21
DDX41-207ENST00000507900 MEX3AA1L020 520 aaKnown RBP13.71□□□□□ -0.22
DDX41-207ENST00000507900 K7EPK0 472 aa13.71□□□□□ -0.22
DDX41-207ENST00000507900 FCN3O75636 299 aa13.71□□□□□ -0.22
DDX41-207ENST00000507900 CFDP00746 253 aaPredicted RBP13.71□□□□□ -0.22
DDX41-207ENST00000507900 DANCRP0C864 163 aa13.71□□□□□ -0.22
DDX41-207ENST00000507900 AP2S1P53680 142 aaPredicted RBP13.71□□□□□ -0.22
DDX41-207ENST00000507900 CATR1Q13166 79 aa13.71□□□□□ -0.22
DDX41-207ENST00000507900 EXOSC2Q13868 293 aaKnown RBP13.71□□□□□ -0.22
DDX41-207ENST00000507900 SMCO1Q147U7 214 aa13.71□□□□□ -0.22
DDX41-207ENST00000507900 ZNF585BQ52M93 769 aa13.71□□□□□ -0.22
DDX41-207ENST00000507900 FAM71E2Q8N5Q1 922 aa13.71□□□□□ -0.22
DDX41-207ENST00000507900 OR10A7Q8NGE5 316 aa13.71□□□□□ -0.22
DDX41-207ENST00000507900 LSM10Q969L4 123 aaKnown RBP13.71□□□□□ -0.22
DDX41-207ENST00000507900 SDHAF2Q9NX18 166 aa13.71□□□□□ -0.22
DDX41-207ENST00000507900 GFOD1Q9NXC2 390 aa13.71□□□□□ -0.22
DDX41-207ENST00000507900 RNF150Q9ULK6 438 aa13.71□□□□□ -0.22
DDX41-207ENST00000507900 PSG11Q9UQ72 335 aa13.71□□□□□ -0.22
DDX41-207ENST00000507900 GAB2Q9UQC2 676 aa13.71□□□□□ -0.22
DDX41-207ENST00000507900 USP24Q9UPU5 2620 aa13.7□□□□□ -0.22
DDX41-207ENST00000507900 KANTRA0A1W2PQU2 76 aa13.7□□□□□ -0.22
DDX41-207ENST00000507900 ST8SIA5O15466 376 aa13.7□□□□□ -0.22
DDX41-207ENST00000507900 ADAM20O43506 726 aa13.7□□□□□ -0.22
DDX41-207ENST00000507900 IGKV1-39P01597 117 aa13.7□□□□□ -0.22
DDX41-207ENST00000507900 RLN2P04090 185 aa13.7□□□□□ -0.22
DDX41-207ENST00000507900 IGKV1D-39P04432 117 aa13.7□□□□□ -0.22
DDX41-207ENST00000507900 MRPS11P82912 194 aaKnown RBP13.7□□□□□ -0.22
DDX41-207ENST00000507900 FGFRL1Q8N441 504 aa13.7□□□□□ -0.22
DDX41-207ENST00000507900 HSD17B10Q99714 261 aaKnown RBP13.7□□□□□ -0.22
DDX41-207ENST00000507900 RAB1BQ9H0U4 201 aa13.7□□□□□ -0.22
DDX41-207ENST00000507900 IDI2-AS1Q9NZ38 188 aa13.7□□□□□ -0.22
DDX41-207ENST00000507900 CTSZQ9UBR2 303 aa13.7□□□□□ -0.22
DDX41-207ENST00000507900 POMT1Q9Y6A1 747 aa13.7□□□□□ -0.22
DDX41-207ENST00000507900 ST8SIA3O43173 380 aa13.69□□□□□ -0.22
DDX41-207ENST00000507900 NDUFB3O43676 98 aa13.69□□□□□ -0.22
DDX41-207ENST00000507900 NDUFB7P17568 137 aa13.69□□□□□ -0.22
DDX41-207ENST00000507900 NUP62P37198 522 aaPredicted RBP13.69□□□□□ -0.22
DDX41-207ENST00000507900 RAB7AP51149 207 aa13.69□□□□□ -0.22
DDX41-207ENST00000507900 UBA52P62987 128 aaKnown RBP13.69□□□□□ -0.22
DDX41-207ENST00000507900 LTC4SQ16873 150 aa13.69□□□□□ -0.22
DDX41-207ENST00000507900 LRRC10Q5BKY1 277 aa13.69□□□□□ -0.22
DDX41-207ENST00000507900 LYPD2Q6UXB3 125 aa13.69□□□□□ -0.22
DDX41-207ENST00000507900 IFI27L2Q9H2X8 130 aa13.69□□□□□ -0.22
DDX41-207ENST00000507900 UBQLN2Q9UHD9 624 aa13.69□□□□□ -0.22
DDX41-207ENST00000507900 IGSF10Q6WRI0 2623 aa13.69□□□□□ -0.22
DDX41-207ENST00000507900 A0A1B0GU03 582 aa13.68□□□□□ -0.22
DDX41-207ENST00000507900 MSGN1A6NI15 193 aa13.68□□□□□ -0.22
DDX41-207ENST00000507900 E5RGE8 158 aa13.68□□□□□ -0.22
DDX41-207ENST00000507900 C19orf84I3L1E1 186 aa13.68□□□□□ -0.22
DDX41-207ENST00000507900 OMGP23515 440 aa13.68□□□□□ -0.22
DDX41-207ENST00000507900 HTR2BP41595 481 aa13.68□□□□□ -0.22
DDX41-207ENST00000507900 RPL30P62888 115 aaKnown RBP13.68□□□□□ -0.22
DDX41-207ENST00000507900 RPL31P62899 125 aaKnown RBP13.68□□□□□ -0.22
DDX41-207ENST00000507900 THOC7Q6I9Y2 204 aaKnown RBP13.68□□□□□ -0.22
DDX41-207ENST00000507900 FAM219AQ8IW50 185 aa13.68□□□□□ -0.22
DDX41-207ENST00000507900 ZNF439Q8NDP4 499 aa13.68□□□□□ -0.22
DDX41-207ENST00000507900 NEU4Q8WWR8 484 aaPredicted RBP13.68□□□□□ -0.22
DDX41-207ENST00000507900 ARPC5LQ9BPX5 153 aa13.68□□□□□ -0.22
DDX41-207ENST00000507900 GAL3ST2Q9H3Q3 398 aa13.68□□□□□ -0.22
DDX41-207ENST00000507900 C19orf12Q9NSK7 152 aa13.68□□□□□ -0.22
DDX41-207ENST00000507900 NSG2Q9Y328 171 aa13.68□□□□□ -0.22
DDX41-207ENST00000507900 LSM5Q9Y4Y9 91 aaKnown RBP13.68□□□□□ -0.22
DDX41-207ENST00000507900 PITX3O75364 302 aa13.67□□□□□ -0.22
DDX41-207ENST00000507900 SCGB1D2O95969 90 aa13.67□□□□□ -0.22
DDX41-207ENST00000507900 IGHV2-70P01814 119 aa13.67□□□□□ -0.22
DDX41-207ENST00000507900 SOD3P08294 240 aa13.67□□□□□ -0.22
DDX41-207ENST00000507900 HKR1P10072 659 aa13.67□□□□□ -0.22
DDX41-207ENST00000507900 COL8A2P25067 703 aa13.67□□□□□ -0.22
DDX41-207ENST00000507900 NKX2-1P43699 371 aaPredicted RBP13.67□□□□□ -0.22
DDX41-207ENST00000507900 GPR12P47775 334 aa13.67□□□□□ -0.22
DDX41-207ENST00000507900 ZNF134P52741 427 aa13.67□□□□□ -0.22
DDX41-207ENST00000507900 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.67□□□□□ -0.22
DDX41-207ENST00000507900 ABHD14AQ9BUJ0 271 aa13.67□□□□□ -0.22
DDX41-207ENST00000507900 C11orf1Q9H5F2 150 aa13.67□□□□□ -0.22
DDX41-207ENST00000507900 PLEKHA2Q9HB19 425 aa13.67□□□□□ -0.22
DDX41-207ENST00000507900 RPUSD1Q9UJJ7 312 aaKnown RBP13.67□□□□□ -0.22
DDX41-207ENST00000507900 A0A0G2JRQ6 117 aa13.66□□□□□ -0.22
DDX41-207ENST00000507900 A0A1W2PPR1 153 aa13.66□□□□□ -0.22
DDX41-207ENST00000507900 B8ZZF3 427 aa13.66□□□□□ -0.22
DDX41-207ENST00000507900 DVL1O14640 695 aa13.66□□□□□ -0.22
DDX41-207ENST00000507900 KCNAB3O43448 404 aa13.66□□□□□ -0.22
DDX41-207ENST00000507900 PROP1O75360 226 aa13.66□□□□□ -0.22
DDX41-207ENST00000507900 GOSR1O95249 250 aa13.66□□□□□ -0.22
DDX41-207ENST00000507900 CLDN1O95832 211 aa13.66□□□□□ -0.22
DDX41-207ENST00000507900 ZNF16P17020 682 aaPredicted RBP13.66□□□□□ -0.22
DDX41-207ENST00000507900 ID3Q02535 119 aa13.66□□□□□ -0.22
DDX41-207ENST00000507900 ZNF273Q14593 569 aa13.66□□□□□ -0.22
DDX41-207ENST00000507900 Q3ZCU0 254 aa13.66□□□□□ -0.22
DDX41-207ENST00000507900 FOXRED2Q8IWF2 684 aa13.66□□□□□ -0.22
DDX41-207ENST00000507900 GPR146Q96CH1 333 aa13.66□□□□□ -0.22
DDX41-207ENST00000507900 RCL1Q9Y2P8 373 aaKnown RBP13.66□□□□□ -0.22
DDX41-207ENST00000507900 IGKV1-5P01602 117 aa13.66□□□□□ -0.22
DDX41-207ENST00000507900 DUTP33316 252 aaKnown RBP13.66□□□□□ -0.22
DDX41-207ENST00000507900 P2RY1P47900 373 aa13.66□□□□□ -0.22
DDX41-207ENST00000507900 BRWD1-AS2P59051 145 aa13.66□□□□□ -0.22
DDX41-207ENST00000507900 HEPN1Q6WQI6 88 aa13.66□□□□□ -0.22
DDX41-207ENST00000507900 DMBX1Q8NFW5 382 aa13.66□□□□□ -0.22
DDX41-207ENST00000507900 STOML3Q8TAV4 291 aa13.66□□□□□ -0.22
DDX41-207ENST00000507900 TCTEX1D2Q8WW35 142 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms