RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 IFI27L2Q9H2X8 130 aa10.45□□□□□ -0.74
TCOF1-209ENST00000506630 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.45□□□□□ -0.74
TCOF1-209ENST00000506630 SPATA2Q9UM82 520 aa10.45□□□□□ -0.74
TCOF1-209ENST00000506630 PRKDCP78527 4128 aaKnown RBP10.44□□□□□ -0.74
TCOF1-209ENST00000506630 IGKV1-6A0A0C4DH72 117 aa10.44□□□□□ -0.74
TCOF1-209ENST00000506630 TMEM235A6NFC5 223 aa10.44□□□□□ -0.74
TCOF1-209ENST00000506630 M0QZK8 103 aa10.44□□□□□ -0.74
TCOF1-209ENST00000506630 BET1O15155 118 aa10.44□□□□□ -0.74
TCOF1-209ENST00000506630 TMEM127O75204 238 aa10.44□□□□□ -0.74
TCOF1-209ENST00000506630 GSTP1P09211 210 aaKnown RBP10.44□□□□□ -0.74
TCOF1-209ENST00000506630 GSTT2P0CG29 244 aa10.44□□□□□ -0.74
TCOF1-209ENST00000506630 GSTT2BP0CG30 244 aa10.44□□□□□ -0.74
TCOF1-209ENST00000506630 CD1BP29016 333 aa10.44□□□□□ -0.74
TCOF1-209ENST00000506630 CEACAM6P40199 344 aa10.44□□□□□ -0.74
TCOF1-209ENST00000506630 OR3A3P47888 321 aa10.44□□□□□ -0.74
TCOF1-209ENST00000506630 GNG2P59768 71 aa10.44□□□□□ -0.74
TCOF1-209ENST00000506630 HERPUD1Q15011 391 aa10.44□□□□□ -0.74
TCOF1-209ENST00000506630 HACD4Q5VWC8 232 aa10.44□□□□□ -0.74
TCOF1-209ENST00000506630 OR2T10Q8NGZ9 312 aa10.44□□□□□ -0.74
TCOF1-209ENST00000506630 NUDCD2Q8WVJ2 157 aa10.44□□□□□ -0.74
TCOF1-209ENST00000506630 MRPL20Q9BYC9 149 aaKnown RBP10.44□□□□□ -0.74
TCOF1-209ENST00000506630 SERTAD4Q9NUC0 356 aa10.44□□□□□ -0.74
TCOF1-209ENST00000506630 PIPOXQ9P0Z9 390 aa10.44□□□□□ -0.74
TCOF1-209ENST00000506630 ZNF736B4DX44 427 aaPredicted RBP10.43□□□□□ -0.74
TCOF1-209ENST00000506630 RAB29O14966 203 aa10.43□□□□□ -0.74
TCOF1-209ENST00000506630 CSF1P09603 554 aa10.43□□□□□ -0.74
TCOF1-209ENST00000506630 DTYMKP23919 212 aa10.43□□□□□ -0.74
TCOF1-209ENST00000506630 LSAMPQ13449 338 aa10.43□□□□□ -0.74
TCOF1-209ENST00000506630 EBI3Q14213 229 aa10.43□□□□□ -0.74
TCOF1-209ENST00000506630 PNLIPRP3Q17RR3 467 aa10.43□□□□□ -0.74
TCOF1-209ENST00000506630 ZNF260Q3ZCT1 412 aa10.43□□□□□ -0.74
TCOF1-209ENST00000506630 RPL39P5Q59GN2 51 aa10.43□□□□□ -0.74
TCOF1-209ENST00000506630 IGSF11Q5DX21 431 aa10.43□□□□□ -0.74
TCOF1-209ENST00000506630 FAM71F2Q6NXP2 309 aa10.43□□□□□ -0.74
TCOF1-209ENST00000506630 ZNF833PQ6ZTB9 187 aa10.43□□□□□ -0.74
TCOF1-209ENST00000506630 GPR141Q7Z602 305 aa10.43□□□□□ -0.74
TCOF1-209ENST00000506630 C11orf44Q8N8P7 122 aa10.43□□□□□ -0.74
TCOF1-209ENST00000506630 SLC25A46Q96AG3 418 aa10.43□□□□□ -0.74
TCOF1-209ENST00000506630 ABHD14BQ96IU4 210 aa10.43□□□□□ -0.74
TCOF1-209ENST00000506630 EAF1Q96JC9 268 aaPredicted RBP10.43□□□□□ -0.74
TCOF1-209ENST00000506630 S1PR3Q99500 378 aa10.43□□□□□ -0.74
TCOF1-209ENST00000506630 CABLES2Q9BTV7 478 aa10.43□□□□□ -0.74
TCOF1-209ENST00000506630 NAA50Q9GZZ1 169 aaKnown RBP10.43□□□□□ -0.74
TCOF1-209ENST00000506630 C11orf54Q9H0W9 315 aaPredicted RBP10.43□□□□□ -0.74
TCOF1-209ENST00000506630 RDH8Q9NYR8 311 aa10.43□□□□□ -0.74
TCOF1-209ENST00000506630 PLXNB1O43157 2135 aa10.42□□□□□ -0.74
TCOF1-209ENST00000506630 TRAV18A0A075B6X5 111 aa10.42□□□□□ -0.74
TCOF1-209ENST00000506630 NCBP2LA6PVI3 153 aaKnown RBP10.42□□□□□ -0.74
TCOF1-209ENST00000506630 ITGB1BP1O14713 200 aa10.42□□□□□ -0.74
TCOF1-209ENST00000506630 FGF16O43320 207 aa10.42□□□□□ -0.74
TCOF1-209ENST00000506630 GABARAPO95166 117 aa10.42□□□□□ -0.74
TCOF1-209ENST00000506630 MOSP00540 346 aa10.42□□□□□ -0.74
TCOF1-209ENST00000506630 AMY1AP04745 511 aa10.42□□□□□ -0.74
TCOF1-209ENST00000506630 AMY2AP04746 511 aa10.42□□□□□ -0.74
TCOF1-209ENST00000506630 PITPNAQ00169 270 aa10.42□□□□□ -0.74
TCOF1-209ENST00000506630 BEAN1Q3B7T3 259 aa10.42□□□□□ -0.74
TCOF1-209ENST00000506630 UBE2NLQ5JXB2 153 aa10.42□□□□□ -0.74
TCOF1-209ENST00000506630 GPR107Q5VW38 600 aa10.42□□□□□ -0.74
TCOF1-209ENST00000506630 REC114Q7Z4M0 266 aa10.42□□□□□ -0.74
TCOF1-209ENST00000506630 ANKRD13BQ86YJ7 626 aa10.42□□□□□ -0.74
TCOF1-209ENST00000506630 C5orf56Q8N8D9 126 aa10.42□□□□□ -0.74
TCOF1-209ENST00000506630 SAMD12Q8N8I0 201 aa10.42□□□□□ -0.74
TCOF1-209ENST00000506630 OR10J5Q8NHC4 309 aa10.42□□□□□ -0.74
TCOF1-209ENST00000506630 RBMXL1Q96E39 390 aaKnown RBP10.42□□□□□ -0.74
TCOF1-209ENST00000506630 NABP2Q9BQ15 211 aa10.42□□□□□ -0.74
TCOF1-209ENST00000506630 GINS4Q9BRT9 223 aa10.42□□□□□ -0.74
TCOF1-209ENST00000506630 ST6GALNAC5Q9BVH7 336 aa10.42□□□□□ -0.74
TCOF1-209ENST00000506630 DIABLOQ9NR28 239 aa10.42□□□□□ -0.74
TCOF1-209ENST00000506630 RNF150Q9ULK6 438 aa10.42□□□□□ -0.74
TCOF1-209ENST00000506630 IGKV1D-8A0A087WSZ0 117 aa10.41□□□□□ -0.74
TCOF1-209ENST00000506630 A0A0A6YYH2 397 aa10.41□□□□□ -0.74
TCOF1-209ENST00000506630 A6NJ64 397 aa10.41□□□□□ -0.74
TCOF1-209ENST00000506630 G3V4G9 280 aa10.41□□□□□ -0.74
TCOF1-209ENST00000506630 GPR12P47775 334 aa10.41□□□□□ -0.74
TCOF1-209ENST00000506630 ALDH3B2P48448 385 aa10.41□□□□□ -0.74
TCOF1-209ENST00000506630 SRSF7Q16629 238 aaKnown RBP eCLIP10.41□□□□□ -0.74
TCOF1-209ENST00000506630 Q6ZS49 121 aa10.41□□□□□ -0.74
TCOF1-209ENST00000506630 Q8N6K4 173 aa10.41□□□□□ -0.74
TCOF1-209ENST00000506630 GHITMQ9H3K2 345 aa10.41□□□□□ -0.74
TCOF1-209ENST00000506630 ZNF221Q9UK13 617 aa10.41□□□□□ -0.74
TCOF1-209ENST00000506630 TRBV6-7A0A0A0MS04 114 aa10.4□□□□□ -0.74
TCOF1-209ENST00000506630 SSX5O60225 188 aa10.4□□□□□ -0.74
TCOF1-209ENST00000506630 FBXO24O75426 580 aa10.4□□□□□ -0.74
TCOF1-209ENST00000506630 DIRAS3O95661 229 aa10.4□□□□□ -0.74
TCOF1-209ENST00000506630 TFAP2AP05549 437 aa10.4□□□□□ -0.74
TCOF1-209ENST00000506630 MMDQ15546 238 aa10.4□□□□□ -0.74
TCOF1-209ENST00000506630 CTF1Q16619 201 aa10.4□□□□□ -0.74
TCOF1-209ENST00000506630 FAM131AQ6UXB0 335 aa10.4□□□□□ -0.74
TCOF1-209ENST00000506630 GLDNQ6ZMI3 551 aaPredicted RBP10.4□□□□□ -0.74
TCOF1-209ENST00000506630 KCTD12Q96CX2 325 aaKnown RBP10.4□□□□□ -0.74
TCOF1-209ENST00000506630 S100A16Q96FQ6 103 aaKnown RBP10.4□□□□□ -0.74
TCOF1-209ENST00000506630 ZNF251Q9BRH9 671 aa10.4□□□□□ -0.74
TCOF1-209ENST00000506630 AGMATQ9BSE5 352 aa10.4□□□□□ -0.74
TCOF1-209ENST00000506630 WNT10AQ9GZT5 417 aa10.4□□□□□ -0.74
TCOF1-209ENST00000506630 TOLLIPQ9H0E2 274 aa10.4□□□□□ -0.74
TCOF1-209ENST00000506630 OR2D2Q9H210 308 aa10.4□□□□□ -0.74
TCOF1-209ENST00000506630 ABCG5Q9H222 651 aa10.4□□□□□ -0.74
TCOF1-209ENST00000506630 DCSTAMPQ9H295 470 aa10.4□□□□□ -0.74
TCOF1-209ENST00000506630 COMMD3Q9UBI1 195 aa10.4□□□□□ -0.74
TCOF1-209ENST00000506630 RBM7Q9Y580 266 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms