RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 ARRDC1Q8N5I2 433 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 Q8N7P7 452 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 OR5T1Q8NG75 326 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 OR5H2Q8NGV7 314 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 OR6F1Q8NGZ6 308 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 OR1L1Q8NH94 360 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 ZNF596Q8TC21 504 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 KIRREL1Q96J84 757 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 YPEL2Q96QA6 119 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 SLC6A7Q99884 636 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 HRASLSQ9HDD0 168 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 SLC2A8Q9NY64 477 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 JPT1Q9UK76 154 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 INSIG2Q9Y5U4 225 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 NUBP2Q9Y5Y2 271 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 KPTNQ9Y664 436 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 ACANP16112 2415 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 TNCP24821 2201 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 CELSR1Q9NYQ6 3014 aa5.91□□□□□ -1.46
NUP54-204ENST00000506098 PLXNB1O43157 2135 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 hCG_1809904A0A1W2PP81 198 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 A0A1W2PPE2 198 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 A0A1W2PR64 198 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 A0A1W2PRV1 198 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 DISC1C4P0D8 188 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 M0QYG6 137 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 SDCBPO00560 298 aaPredicted RBP5.9□□□□□ -1.46
NUP54-204ENST00000506098 TSPAN4O14817 238 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 SLC31A2O15432 143 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 LYRM1O43325 122 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 MMP23AO75900 390 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 SNAPC5O75971 98 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 FCER2P06734 321 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 MSMBP08118 114 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 OR5H8P0DN80 308 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 IGHV1-8P0DP01 117 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 IGHV4-31P0DP07 118 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 MMP9P14780 707 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 GATA3P23771 443 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 ZBTB25P24278 435 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 CD34P28906 385 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 BTCP35070 178 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 GZMKP49863 264 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 DVL1P1P54792 670 aaPredicted RBP5.9□□□□□ -1.46
NUP54-204ENST00000506098 CD300CQ08708 224 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 HNF4GQ14541 408 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 TMEM249Q2WGJ8 235 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 MORN2Q502X0 79 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 TMEM65Q6PI78 240 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 TMEM17Q86X19 198 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 H1FOOQ8IZA3 346 aaPredicted RBP5.9□□□□□ -1.46
NUP54-204ENST00000506098 C8orf31Q8N9H6 132 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 LINC01356Q8N9X3 169 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 CLRN3Q8NCR9 226 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 OR10J5Q8NHC4 309 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 RFESDQ8TAC1 157 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 ZFAND1Q8TCF1 268 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 TXN2Q99757 166 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 TINAGL1Q9GZM7 467 aaPredicted RBP5.9□□□□□ -1.46
NUP54-204ENST00000506098 SIRPDQ9H106 197 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 METTL8Q9H825 291 aaKnown RBP5.9□□□□□ -1.46
NUP54-204ENST00000506098 MMP26Q9NRE1 261 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 GSN-AS1Q9NRJ2 163 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 MED9Q9NWA0 146 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 GFOD1Q9NXC2 390 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 EHFQ9NZC4 300 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 SLC23A1Q9UHI7 598 aa5.9□□□□□ -1.46
NUP54-204ENST00000506098 TLN2Q9Y4G6 2542 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 MEX3AA1L020 520 aaKnown RBP5.89□□□□□ -1.47
NUP54-204ENST00000506098 KRBOX1C9JBD0 128 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 NDUFS6O75380 124 aaKnown RBP5.89□□□□□ -1.47
NUP54-204ENST00000506098 RGS11O94810 467 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 SCGB1D2O95969 90 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 IFNA10P01566 189 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 AMY2AP04746 511 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 IFNA6P05013 189 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 OR4E1P0C645 316 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 ZP3P21754 424 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 OMGP23515 440 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 PRTN3P24158 256 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 SLC6A1P30531 599 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 FCGR2CP31995 323 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 NUP62P37198 522 aaPredicted RBP5.89□□□□□ -1.47
NUP54-204ENST00000506098 CEACAM6P40199 344 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 UCP3P55916 312 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 DEFA1P59665 94 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 DEFA3P59666 94 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 ERVFRD-1P60508 538 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 ARF6P62330 175 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 RPP30P78346 268 aaKnown RBP5.89□□□□□ -1.47
NUP54-204ENST00000506098 DNLZQ5SXM8 178 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 PRAMEF5Q5TYX0 476 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 AADACL3Q5VUY0 350 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 FAAP20Q6NZ36 180 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 BTNL3Q6UXE8 466 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 SPNS3Q6ZMD2 512 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 PRR18Q8N4B5 295 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 EIF4E3Q8N5X7 224 aaKnown RBP5.89□□□□□ -1.47
NUP54-204ENST00000506098 LINC00311Q8N616 119 aa5.89□□□□□ -1.47
NUP54-204ENST00000506098 ZNF439Q8NDP4 499 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms