RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 ZNF576Q9H609 170 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 OR6C3Q9NZP0 311 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 TIMM8BQ9Y5J9 83 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-208ENST00000504387 MUC3AQ02505 3323 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 CBY3A6NI87 242 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 IFNA1P01562 189 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 RAB4AP20338 218 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 CD82P27701 267 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 BRS3P32247 399 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 RAB7AP51149 207 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 NMSQ5H8A3 153 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 FFAR4Q5NUL3 377 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 C1orf194Q5T5A4 169 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 Q6ZWC4 215 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 ZNF295-AS1Q8N0V1 137 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 CARFQ8N187 725 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 SNIP1Q8TAD8 396 aaKnown RBP6.5□□□□□ -1.37
NEDD9-208ENST00000504387 ZDHHC16Q969W1 377 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 CIB3Q96Q77 187 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-208ENST00000504387 ATP23Q9Y6H3 246 aa6.5□□□□□ -1.37
NEDD9-208ENST00000504387 CNOT1A5YKK6 2376 aaKnown RBP6.49□□□□□ -1.37
NEDD9-208ENST00000504387 SYNGR1O43759 233 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 SERF1AO75920 110 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 TFF1P04155 84 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 CHRNB4P30926 498 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 OR10J1P30954 320 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 NTF4P34130 210 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 RBM11P57052 281 aaKnown RBP6.49□□□□□ -1.37
NEDD9-208ENST00000504387 CCL7P80098 99 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 SLC38A11Q08AI6 406 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 RAB35Q15286 201 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 MAJINQ3KP22 176 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 ZNF525Q8N782 197 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 LRTM2Q8N967 370 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 RASL10BQ96S79 203 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 OCIAD1Q9NX40 245 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 RNF115Q9Y4L5 304 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 RNF114Q9Y508 228 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 ROS1P08922 2347 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 KIAA1549Q9HCM3 1950 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 C11orf94C9JXX5 98 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 ZIC3O60481 467 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 KBTBD11O94819 623 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 GLB1P16278 677 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 CCL1P22362 96 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 NPPCP23582 126 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 CNN3Q15417 329 aaKnown RBP6.49□□□□□ -1.37
NEDD9-208ENST00000504387 DCAF10Q5QP82 559 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 SPATA46Q5T0L3 261 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 FAM19A2Q8N3H0 131 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 OR56B2PQ8NGI1 322 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 RNASEH2CQ8TDP1 164 aaKnown RBP6.49□□□□□ -1.37
NEDD9-208ENST00000504387 DECR2Q9NUI1 292 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 CPAMD8Q8IZJ3 1885 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 TMEM131Q92545 1883 aa6.49□□□□□ -1.37
NEDD9-208ENST00000504387 F2RP25116 425 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 G6PCP35575 357 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 IER3P46695 156 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 MRPS11P82912 194 aaKnown RBP6.48□□□□□ -1.37
NEDD9-208ENST00000504387 UNQ5815/PRO19632Q6UWF5 114 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 OR2M3Q8NG83 312 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 ZCCHC14Q8WYQ9 949 aaKnown RBP6.48□□□□□ -1.37
NEDD9-208ENST00000504387 TAF15Q92804 592 aaKnown RBP eCLIP6.48□□□□□ -1.373e-6■□□□□ 9.1
NEDD9-208ENST00000504387 ZC2HC1AQ96GY0 325 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 C11orf1Q9H5F2 150 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 TP53I11O14683 189 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 CEACAM8P31997 349 aaPredicted RBP6.48□□□□□ -1.37
NEDD9-208ENST00000504387 PPP1CBP62140 327 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 ZNF90Q03938 601 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 CYP2G1PQ6ZSU1 146 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 STPG4Q8N801 248 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 ST6GALNAC6Q969X2 333 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 MTCH2Q9Y6C9 303 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 RBFOX2O43251 390 aaKnown RBP eCLIP6.48□□□□□ -1.37
NEDD9-208ENST00000504387 IGKV1-39P01597 117 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 IGKV1D-39P04432 117 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 CCL3P10147 92 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 NXPH1P58417 271 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 PSG4Q00888 419 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 CEACAM16Q2WEN9 425 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 ACTL10Q5JWF8 245 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 ABLIM2Q6H8Q1 611 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 KCNIP4Q6PIL6 250 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 Q6ZN92 141 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 KMT5CQ86Y97 462 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 SMRP1Q8NCR6 262 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 OR1F12Q8NHA8 337 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 MRGPRX4Q96LA9 322 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 TMEM56Q96MV1 263 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 CTDSP1Q9GZU7 261 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 TMEM9BQ9NQ34 198 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 TMEM56-RWDD3S4R434 201 aa6.48□□□□□ -1.37
NEDD9-208ENST00000504387 MUC22E2RYF6 1773 aaPredicted RBP6.47□□□□□ -1.37
NEDD9-208ENST00000504387 A0A0U1RQV5 110 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 LOC102725191A0A1B0GVB3 256 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 CXCL13O43927 109 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 IFI6P09912 130 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 PAX1P15863 534 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 HBG1P69891 147 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 HBG2P69892 147 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms