RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 TRBV5-5A0A0J9YX44 114 aa11.21□□□□□ -0.61
TRAF4-212ENST00000498540 FAM90A7PA6NKC0 464 aa11.21□□□□□ -0.61
TRAF4-212ENST00000498540 FAM90A23PA8MXZ1 464 aa11.21□□□□□ -0.61
TRAF4-212ENST00000498540 ARPC1BO15143 372 aaKnown RBP11.21□□□□□ -0.61
TRAF4-212ENST00000498540 RGS11O94810 467 aa11.21□□□□□ -0.61
TRAF4-212ENST00000498540 TRGV3P03979 118 aa11.21□□□□□ -0.61
TRAF4-212ENST00000498540 CT45A6P0DMU7 189 aa11.21□□□□□ -0.61
TRAF4-212ENST00000498540 CT45A5P0DMU8 189 aa11.21□□□□□ -0.61
TRAF4-212ENST00000498540 CT45A7P0DMV0 189 aa11.21□□□□□ -0.61
TRAF4-212ENST00000498540 FUT3P21217 361 aa11.21□□□□□ -0.61
TRAF4-212ENST00000498540 AKIRIN2Q53H80 203 aa11.21□□□□□ -0.61
TRAF4-212ENST00000498540 LY6G6FQ5SQ64 297 aa11.21□□□□□ -0.61
TRAF4-212ENST00000498540 C6orf141Q5SZD1 244 aa11.21□□□□□ -0.61
TRAF4-212ENST00000498540 DMKNQ6E0U4 476 aaPredicted RBP11.21□□□□□ -0.61
TRAF4-212ENST00000498540 AWAT2Q6E213 333 aa11.21□□□□□ -0.61
TRAF4-212ENST00000498540 FAM71F2Q6NXP2 309 aa11.21□□□□□ -0.61
TRAF4-212ENST00000498540 IL34Q6ZMJ4 242 aa11.21□□□□□ -0.61
TRAF4-212ENST00000498540 CBR4Q8N4T8 237 aa11.21□□□□□ -0.61
TRAF4-212ENST00000498540 APH1BQ8WW43 257 aa11.21□□□□□ -0.61
TRAF4-212ENST00000498540 SMIM19Q96E16 107 aa11.21□□□□□ -0.61
TRAF4-212ENST00000498540 FAM110AQ9BQ89 295 aa11.21□□□□□ -0.61
TRAF4-212ENST00000498540 TMED9Q9BVK6 235 aa11.21□□□□□ -0.61
TRAF4-212ENST00000498540 SLA2Q9H6Q3 261 aa11.21□□□□□ -0.61
TRAF4-212ENST00000498540 RPL36Q9Y3U8 105 aaKnown RBP11.21□□□□□ -0.61
TRAF4-212ENST00000498540 OR5H14A6NHG9 310 aa11.2□□□□□ -0.62
TRAF4-212ENST00000498540 H0YJW9 148 aa11.2□□□□□ -0.62
TRAF4-212ENST00000498540 OGG1O15527 345 aa11.2□□□□□ -0.62
TRAF4-212ENST00000498540 PDCD6O75340 191 aa11.2□□□□□ -0.62
TRAF4-212ENST00000498540 GPX5O75715 221 aa11.2□□□□□ -0.62
TRAF4-212ENST00000498540 CRTAPO75718 401 aaPredicted RBP11.2□□□□□ -0.62
TRAF4-212ENST00000498540 BAG2O95816 211 aa11.2□□□□□ -0.62
TRAF4-212ENST00000498540 LALBAP00709 142 aa11.2□□□□□ -0.62
TRAF4-212ENST00000498540 TFAP2AP05549 437 aa11.2□□□□□ -0.62
TRAF4-212ENST00000498540 GLAP06280 429 aa11.2□□□□□ -0.62
TRAF4-212ENST00000498540 FSTP19883 344 aa11.2□□□□□ -0.62
TRAF4-212ENST00000498540 ZP3P21754 424 aa11.2□□□□□ -0.62
TRAF4-212ENST00000498540 RPS11P62280 158 aaKnown RBP eCLIP11.2□□□□□ -0.62
TRAF4-212ENST00000498540 GALMQ96C23 342 aa11.2□□□□□ -0.62
TRAF4-212ENST00000498540 PARP12Q9H0J9 701 aaKnown RBP11.2□□□□□ -0.62
TRAF4-212ENST00000498540 TUBA4BQ9H853 241 aa11.2□□□□□ -0.62
TRAF4-212ENST00000498540 RANGRFQ9HD47 186 aaPredicted RBP11.2□□□□□ -0.62
TRAF4-212ENST00000498540 FGF20Q9NP95 211 aaPredicted RBP11.2□□□□□ -0.62
TRAF4-212ENST00000498540 CKLFQ9UBR5 152 aa11.2□□□□□ -0.62
TRAF4-212ENST00000498540 A0A1W2PPK0 400 aa11.19□□□□□ -0.62
TRAF4-212ENST00000498540 ANKRD34BA5PLL1 514 aa11.19□□□□□ -0.62
TRAF4-212ENST00000498540 H7C2Y5 167 aa11.19□□□□□ -0.62
TRAF4-212ENST00000498540 CA2P00918 260 aa11.19□□□□□ -0.62
TRAF4-212ENST00000498540 GSTP1P09211 210 aaKnown RBP11.19□□□□□ -0.62
TRAF4-212ENST00000498540 CD40LGP29965 261 aa11.19□□□□□ -0.62
TRAF4-212ENST00000498540 KLF5Q13887 457 aaPredicted RBP11.19□□□□□ -0.62
TRAF4-212ENST00000498540 HMGN3Q15651 99 aa11.19□□□□□ -0.62
TRAF4-212ENST00000498540 SMN1Q16637 294 aaKnown RBP11.19□□□□□ -0.62
TRAF4-212ENST00000498540 Q499Y3 187 aa11.19□□□□□ -0.62
TRAF4-212ENST00000498540 ZNF562Q6V9R5 426 aa11.19□□□□□ -0.62
TRAF4-212ENST00000498540 OR9G4Q8NGQ1 327 aa11.19□□□□□ -0.62
TRAF4-212ENST00000498540 IL1F10Q8WWZ1 152 aa11.19□□□□□ -0.62
TRAF4-212ENST00000498540 GHSRQ92847 366 aa11.19□□□□□ -0.62
TRAF4-212ENST00000498540 FAM46BQ96A09 425 aa11.19□□□□□ -0.62
TRAF4-212ENST00000498540 OR14A2Q96R54 314 aa11.19□□□□□ -0.62
TRAF4-212ENST00000498540 PIPOXQ9P0Z9 390 aa11.19□□□□□ -0.62
TRAF4-212ENST00000498540 METTL1Q9UBP6 276 aaKnown RBP11.19□□□□□ -0.62
TRAF4-212ENST00000498540 ADAM30Q9UKF2 790 aa11.19□□□□□ -0.62
TRAF4-212ENST00000498540 WASHC3Q9Y3C0 194 aa11.19□□□□□ -0.62
TRAF4-212ENST00000498540 PLECQ15149 4684 aaKnown RBP11.18□□□□□ -0.62
TRAF4-212ENST00000498540 TRBV5-7A0A0A0MS05 114 aa11.18□□□□□ -0.62
TRAF4-212ENST00000498540 IZUMO1RA6ND01 250 aa11.18□□□□□ -0.62
TRAF4-212ENST00000498540 H0Y980 276 aa11.18□□□□□ -0.62
TRAF4-212ENST00000498540 RAB29O14966 203 aa11.18□□□□□ -0.62
TRAF4-212ENST00000498540 SYNJ2BPP57105 145 aa11.18□□□□□ -0.62
TRAF4-212ENST00000498540 DEFA5Q01523 94 aa11.18□□□□□ -0.62
TRAF4-212ENST00000498540 PSG5Q15238 335 aa11.18□□□□□ -0.62
TRAF4-212ENST00000498540 TMPRSS11AQ6ZMR5 421 aa11.18□□□□□ -0.62
TRAF4-212ENST00000498540 GTSCR1Q86UQ5 136 aa11.18□□□□□ -0.62
TRAF4-212ENST00000498540 ZFP41Q8N8Y5 198 aa11.18□□□□□ -0.62
TRAF4-212ENST00000498540 GRPEL2Q8TAA5 225 aa11.18□□□□□ -0.62
TRAF4-212ENST00000498540 ABHD14BQ96IU4 210 aa11.18□□□□□ -0.62
TRAF4-212ENST00000498540 PGLYRP3Q96LB9 341 aa11.18□□□□□ -0.62
TRAF4-212ENST00000498540 SULT4A1Q9BR01 284 aa11.18□□□□□ -0.62
TRAF4-212ENST00000498540 HIPK2Q9H2X6 1198 aa11.18□□□□□ -0.62
TRAF4-212ENST00000498540 ZNF355PQ9NSJ1 428 aa11.18□□□□□ -0.62
TRAF4-212ENST00000498540 BABAM2Q9NXR7 383 aa11.18□□□□□ -0.62
TRAF4-212ENST00000498540 STEAP1Q9UHE8 339 aa11.18□□□□□ -0.62
TRAF4-212ENST00000498540 SLC23A1Q9UHI7 598 aa11.18□□□□□ -0.62
TRAF4-212ENST00000498540 C13orf42A0A1B0GVH6 325 aa11.17□□□□□ -0.62
TRAF4-212ENST00000498540 H3BNX3 289 aa11.17□□□□□ -0.62
TRAF4-212ENST00000498540 RBBP9O75884 186 aa11.17□□□□□ -0.62
TRAF4-212ENST00000498540 MC5RP33032 325 aa11.17□□□□□ -0.62
TRAF4-212ENST00000498540 YIF1BQ5BJH7 314 aa11.17□□□□□ -0.62
TRAF4-212ENST00000498540 POC5Q8NA72 575 aa11.17□□□□□ -0.62
TRAF4-212ENST00000498540 OR5T1Q8NG75 326 aa11.17□□□□□ -0.62
TRAF4-212ENST00000498540 OR5AN1Q8NGI8 311 aa11.17□□□□□ -0.62
TRAF4-212ENST00000498540 PLEKHA3Q9HB20 300 aa11.17□□□□□ -0.62
TRAF4-212ENST00000498540 CEPT1Q9Y6K0 416 aa11.17□□□□□ -0.62
TRAF4-212ENST00000498540 LOC100130705A0A1B0GUX0 176 aa11.16□□□□□ -0.62
TRAF4-212ENST00000498540 SLC22A1O15245 554 aa11.16□□□□□ -0.62
TRAF4-212ENST00000498540 WBP4O75554 376 aaKnown RBP11.16□□□□□ -0.62
TRAF4-212ENST00000498540 TRBV12-3P01733 135 aa11.16□□□□□ -0.62
TRAF4-212ENST00000498540 IGKV1-16P04430 117 aa11.16□□□□□ -0.62
TRAF4-212ENST00000498540 CSN3P07498 182 aa11.16□□□□□ -0.62
TRAF4-212ENST00000498540 DCKP27707 260 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms