RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 OR2J3O76001 311 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 CA2P00918 260 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 APOA1P02647 267 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 SLPIP03973 132 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ACYP1P07311 99 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 DAOP14920 347 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ARSBP15848 533 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 FGF9P31371 208 aaPredicted RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 GLRXP35754 106 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 PSMB10P40306 273 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 DAD1P61803 113 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 NCS1P62166 190 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 RPL23AP62750 156 aaKnown RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 SEC11AP67812 179 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 FABP9Q0Z7S8 132 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 MMDQ15546 238 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 MRPL23Q16540 153 aaKnown RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 POM121L1PQ3SYA9 428 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 SLC9B1Q4ZJI4 515 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 MRPL2Q5T653 305 aaKnown RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 PATE2Q6UY27 113 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 RPS27LQ71UM5 84 aaKnown RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 SSX6Q7RTT6 188 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 MTERF4Q7Z6M4 381 aaKnown RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 TRPT1Q86TN4 253 aaKnown RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 NIT1Q86X76 327 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 OR5H6Q8NGV6 325 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 MBD3L2Q8NHZ7 208 aaPredicted RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 OR5P3Q8WZ94 311 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ELSPBP1Q96BH3 223 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ZNF414Q96IQ9 312 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 OR8B4Q96RC9 309 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 PITX2Q99697 317 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 PYGO2Q9BRQ0 406 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 TCEAL7Q9BRU2 100 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 TM2D2Q9BX73 214 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ARMC1Q9NVT9 282 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 CCL27Q9Y4X3 112 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 CACNA1FO60840 1977 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 TENM2Q9NT68 2774 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 POLR2AP24928 1970 aaKnown RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 ITPR2Q14571 2701 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 TRBV6-8A0A0A6YYG3 113 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 CENPVL1A0A0U1RR11 272 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 UBE2L5PA0A1B0GUS4 154 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 A0A1B0GWB2 263 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 A0A1W2PRD5 423 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 A0A1W2PRF3 423 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 A0A1W2PRM7 423 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 TCRBV5S1A1TA0A578 114 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 PRAMEF26H0Y7S4 382 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 K7EQM0 130 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 IFNL4K9M1U5 179 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 NKX2-8O15522 239 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 MT-CO2P00403 227 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 NPPAP01160 153 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 IGHV3-7P01780 117 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 KRT14P02533 472 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 FAM58BPP0C7Q3 252 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 TCF3P15923 654 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 TNFSF4P23510 183 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 TNFSF8P32971 234 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 GP5P40197 560 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 FOLR3P41439 243 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 LHX1P48742 406 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 RBBP7Q16576 425 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 METTL2BQ6P1Q9 378 aaKnown RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 AAGABQ6PD74 315 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 ZNF550Q7Z398 422 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 LINC00596Q86U02 117 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 TMEM17Q86X19 198 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 OR2Z1Q8NG97 314 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 OR56B1Q8NGI3 324 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 OR52K2Q8NGK3 314 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 OR1J2Q8NGS2 313 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 UBA3Q8TBC4 463 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 PTPMT1Q8WUK0 201 aaPredicted RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 RPL3LQ92901 407 aaKnown RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 SNX21Q969T3 373 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 TMIGD2Q96BF3 282 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 EID2BQ96D98 161 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 EEF2KMTQ96G04 330 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 METTL2AQ96IZ6 378 aaKnown RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 PEBP4Q96S96 227 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 COPS8Q99627 209 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 VCX3BQ9H321 246 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 C12orf4Q9NQ89 552 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 OSTCQ9NRP0 149 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 GCNT4Q9P109 453 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 COMMD3Q9UBI1 195 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 B4GALT6Q9UBX8 382 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 RPH3ALQ9UNE2 315 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 POLDIP2Q9Y2S7 368 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 COQ4Q9Y3A0 265 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 MACF1Q9UPN3 7388 aaKnown RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 OTOFQ9HC10 1997 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 LOC100509620A0A075B734 347 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 RBFOX3A6NFN3 312 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 METTL15A6NJ78 407 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 A8MVJ9 347 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms