RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 A6NNC1 897 aa13.52□□□□□ -0.25
HLA-A-208ENST00000496081 LY6HO94772 140 aa13.52□□□□□ -0.25
HLA-A-208ENST00000496081 IGHV3-7P01780 117 aa13.52□□□□□ -0.25
HLA-A-208ENST00000496081 SERPINE2P07093 398 aa13.52□□□□□ -0.25
HLA-A-208ENST00000496081 LYL1P12980 280 aa13.52□□□□□ -0.25
HLA-A-208ENST00000496081 ZNF16P17020 682 aaPredicted RBP13.52□□□□□ -0.25
HLA-A-208ENST00000496081 C4BPBP20851 252 aa13.52□□□□□ -0.25
HLA-A-208ENST00000496081 AP2S1P53680 142 aaPredicted RBP13.52□□□□□ -0.25
HLA-A-208ENST00000496081 RPL31P62899 125 aaKnown RBP13.52□□□□□ -0.25
HLA-A-208ENST00000496081 ZNF273Q14593 569 aa13.52□□□□□ -0.25
HLA-A-208ENST00000496081 NEU4Q8WWR8 484 aaPredicted RBP13.52□□□□□ -0.25
HLA-A-208ENST00000496081 ARL6Q9H0F7 186 aa13.52□□□□□ -0.25
HLA-A-208ENST00000496081 PLEKHF2Q9H8W4 249 aa13.52□□□□□ -0.25
HLA-A-208ENST00000496081 LIN7CQ9NUP9 197 aaKnown RBP13.52□□□□□ -0.25
HLA-A-208ENST00000496081 GFOD1Q9NXC2 390 aa13.52□□□□□ -0.25
HLA-A-208ENST00000496081 TAS2R3Q9NYW6 316 aa13.52□□□□□ -0.25
HLA-A-208ENST00000496081 OR5AC2Q9NZP5 309 aa13.52□□□□□ -0.25
HLA-A-208ENST00000496081 DCHS2Q6V1P9 2916 aa13.51□□□□□ -0.25
HLA-A-208ENST00000496081 RNF222A6NCQ9 220 aa13.51□□□□□ -0.25
HLA-A-208ENST00000496081 RNF212BA8MTL3 300 aa13.51□□□□□ -0.25
HLA-A-208ENST00000496081 IGHV2-70P01814 119 aa13.51□□□□□ -0.25
HLA-A-208ENST00000496081 RNF224P0DH78 156 aa13.51□□□□□ -0.25
HLA-A-208ENST00000496081 VDAC1P21796 283 aa13.51□□□□□ -0.25
HLA-A-208ENST00000496081 S100A10P60903 97 aa13.51□□□□□ -0.25
HLA-A-208ENST00000496081 RPL30P62888 115 aaKnown RBP13.51□□□□□ -0.25
HLA-A-208ENST00000496081 ZNF585BQ52M93 769 aa13.51□□□□□ -0.25
HLA-A-208ENST00000496081 TMEM200BQ69YZ2 307 aa13.51□□□□□ -0.25
HLA-A-208ENST00000496081 OR52M1Q8NGK5 317 aa13.51□□□□□ -0.25
HLA-A-208ENST00000496081 FAM216AQ8WUB2 273 aa13.51□□□□□ -0.25
HLA-A-208ENST00000496081 DCUN1D4Q92564 292 aa13.51□□□□□ -0.25
HLA-A-208ENST00000496081 UBTD1Q9HAC8 227 aa13.51□□□□□ -0.25
HLA-A-208ENST00000496081 SDHAF2Q9NX18 166 aa13.51□□□□□ -0.25
HLA-A-208ENST00000496081 IDI2-AS1Q9NZ38 188 aa13.51□□□□□ -0.25
HLA-A-208ENST00000496081 DOPEY1Q5JWR5 2465 aa13.51□□□□□ -0.25
HLA-A-208ENST00000496081 KCNAB3O43448 404 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 MMP23AO75900 390 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 IGKV1-39P01597 117 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 IGKV1D-39P04432 117 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 PET100P0DJ07 73 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 ZNF345Q14585 488 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 NMSQ5H8A3 153 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 BTNL3Q6UXE8 466 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 ACOT7LQ6ZUV0 252 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 FOXRED2Q8IWF2 684 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 OR1S1Q8NH92 325 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 H1FXQ92522 213 aaKnown RBP13.5□□□□□ -0.25
HLA-A-208ENST00000496081 LEAP2Q969E1 77 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 YLPM1P49750 1951 aaKnown RBP13.5□□□□□ -0.25
HLA-A-208ENST00000496081 USP9XQ93008 2570 aaPredicted RBP13.5□□□□□ -0.25
HLA-A-208ENST00000496081 USF3Q68DE3 2245 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 J3QKU1 62 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 ITGB1BP1O14713 200 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 PROP1O75360 226 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 OR2F2O95006 317 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 SCGB1D2O95969 90 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 MBPP02686 304 aaPredicted RBP13.5□□□□□ -0.25
HLA-A-208ENST00000496081 MRPS11P82912 194 aaKnown RBP13.5□□□□□ -0.25
HLA-A-208ENST00000496081 OR2F1Q13607 317 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 Q3ZCU0 254 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 TEX261Q6UWH6 196 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 KCNRGQ8N5I3 272 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 OR8H1Q8NGG4 311 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 OR4D5Q8NGN0 318 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 RRNAD1Q96FB5 475 aaKnown RBP13.5□□□□□ -0.25
HLA-A-208ENST00000496081 IFI27L2Q9H2X8 130 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 GAL3ST2Q9H3Q3 398 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 U3KQ87 197 aa13.5□□□□□ -0.25
HLA-A-208ENST00000496081 A0A0D9SG52 128 aa13.49□□□□□ -0.25
HLA-A-208ENST00000496081 CLEC18AA5D8T8 446 aa13.49□□□□□ -0.25
HLA-A-208ENST00000496081 SLC31A2O15432 143 aa13.49□□□□□ -0.25
HLA-A-208ENST00000496081 DAOP14920 347 aa13.49□□□□□ -0.25
HLA-A-208ENST00000496081 NFYBP25208 207 aa13.49□□□□□ -0.25
HLA-A-208ENST00000496081 GPR12P47775 334 aa13.49□□□□□ -0.25
HLA-A-208ENST00000496081 TMEM30BQ3MIR4 351 aa13.49□□□□□ -0.25
HLA-A-208ENST00000496081 ESCO2Q56NI9 601 aa13.49□□□□□ -0.25
HLA-A-208ENST00000496081 CT45A1Q5HYN5 189 aa13.49□□□□□ -0.25
HLA-A-208ENST00000496081 AVPI1Q5T686 147 aa13.49□□□□□ -0.25
HLA-A-208ENST00000496081 PRAMEF5Q5TYX0 476 aa13.49□□□□□ -0.25
HLA-A-208ENST00000496081 ZNF66Q6ZN08 573 aa13.49□□□□□ -0.25
HLA-A-208ENST00000496081 INO80EQ8NBZ0 244 aaPredicted RBP13.49□□□□□ -0.25
HLA-A-208ENST00000496081 CLEC18CQ8NCF0 446 aa13.49□□□□□ -0.25
HLA-A-208ENST00000496081 CT45A3Q8NHU0 189 aa13.49□□□□□ -0.25
HLA-A-208ENST00000496081 RPUSD1Q9UJJ7 312 aaKnown RBP13.49□□□□□ -0.25
HLA-A-208ENST00000496081 LSM5Q9Y4Y9 91 aaKnown RBP13.49□□□□□ -0.25
HLA-A-208ENST00000496081 MYO18BQ8IUG5 2567 aa13.49□□□□□ -0.25
HLA-A-208ENST00000496081 PIGBOS1A0A0B4J2F0 54 aa13.48□□□□□ -0.25
HLA-A-208ENST00000496081 A0A0G2JRQ6 117 aa13.48□□□□□ -0.25
HLA-A-208ENST00000496081 LINC00473A8K010 186 aa13.48□□□□□ -0.25
HLA-A-208ENST00000496081 DEDDO75618 318 aa13.48□□□□□ -0.25
HLA-A-208ENST00000496081 CLDN1O95832 211 aa13.48□□□□□ -0.25
HLA-A-208ENST00000496081 CCL3L1P16619 93 aa13.48□□□□□ -0.25
HLA-A-208ENST00000496081 BRWD1-AS2P59051 145 aa13.48□□□□□ -0.25
HLA-A-208ENST00000496081 ERVFRD-1P60508 538 aa13.48□□□□□ -0.25
HLA-A-208ENST00000496081 CATR1Q13166 79 aa13.48□□□□□ -0.25
HLA-A-208ENST00000496081 ZNF439Q8NDP4 499 aa13.48□□□□□ -0.25
HLA-A-208ENST00000496081 ZNF714Q96N38 554 aa13.48□□□□□ -0.25
HLA-A-208ENST00000496081 HSD17B10Q99714 261 aaKnown RBP13.48□□□□□ -0.25
HLA-A-208ENST00000496081 SPIN2AQ99865 258 aa13.48□□□□□ -0.25
HLA-A-208ENST00000496081 SPIN2BQ9BPZ2 258 aa13.48□□□□□ -0.25
HLA-A-208ENST00000496081 LPAR3Q9UBY5 353 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms