RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 CPEP16870 476 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 FSTP19883 344 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 CX3CL1P78423 397 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 HTD2P86397 168 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 ZNF660Q6AZW8 331 aaPredicted RBP7.43□□□□□ -1.22
UBR4-216ENST00000494503 PYHIN1Q6K0P9 492 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 ZNF833PQ6ZTB9 187 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 ODF3L1Q8IXM7 274 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 TCTEX1D1Q8N7M0 179 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 NKAIN3Q8N8D7 197 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 MINDY2Q8NBR6 621 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 LFNGQ8NES3 379 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 NPBQ8NG41 125 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 TMEM80Q96HE8 168 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 ABHD14BQ96IU4 210 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 Q96M66 194 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 RDH12Q96NR8 316 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 YPEL2Q96QA6 119 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 CITED4Q96RK1 184 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 TMED9Q9BVK6 235 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 TUBA4BQ9H853 241 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 MRPS18AQ9NVS2 196 aaKnown RBP7.43□□□□□ -1.22
UBR4-216ENST00000494503 SMPD3Q9NY59 655 aaPredicted RBP7.43□□□□□ -1.22
UBR4-216ENST00000494503 PIPOXQ9P0Z9 390 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 STUB1Q9UNE7 303 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 OR5H14A6NHG9 310 aa7.42□□□□□ -1.22
UBR4-216ENST00000494503 FCN1O00602 326 aa7.42□□□□□ -1.22
UBR4-216ENST00000494503 DYNC1I1O14576 645 aa7.42□□□□□ -1.22
UBR4-216ENST00000494503 RAB29O14966 203 aa7.42□□□□□ -1.22
UBR4-216ENST00000494503 WBP4O75554 376 aaKnown RBP7.42□□□□□ -1.22
UBR4-216ENST00000494503 NDUFA3O95167 84 aa7.42□□□□□ -1.22
UBR4-216ENST00000494503 CNIH1O95406 144 aa7.42□□□□□ -1.22
UBR4-216ENST00000494503 CA2P00918 260 aa7.42□□□□□ -1.22
UBR4-216ENST00000494503 CELP19835 753 aa7.42□□□□□ -1.22
UBR4-216ENST00000494503 TAS2R43P59537 309 aa7.42□□□□□ -1.22
UBR4-216ENST00000494503 RPS16P62249 146 aaKnown RBP7.42□□□□□ -1.22
UBR4-216ENST00000494503 RBM48Q5RL73 367 aaKnown RBP7.42□□□□□ -1.22
UBR4-216ENST00000494503 DMKNQ6E0U4 476 aaPredicted RBP7.42□□□□□ -1.22
UBR4-216ENST00000494503 SIGIRRQ6IA17 410 aa7.42□□□□□ -1.22
UBR4-216ENST00000494503 OR10K2Q6IF99 312 aa7.42□□□□□ -1.22
UBR4-216ENST00000494503 C6orf201Q7Z4U5 140 aa7.42□□□□□ -1.22
UBR4-216ENST00000494503 C10orf67Q8IYJ2 551 aa7.42□□□□□ -1.22
UBR4-216ENST00000494503 DRAXINQ8NBI3 349 aaPredicted RBP7.42□□□□□ -1.22
UBR4-216ENST00000494503 DERL3Q96Q80 235 aa7.42□□□□□ -1.22
UBR4-216ENST00000494503 SULT4A1Q9BR01 284 aa7.42□□□□□ -1.22
UBR4-216ENST00000494503 FAAP24Q9BTP7 215 aa7.42□□□□□ -1.22
UBR4-216ENST00000494503 IFI27L2Q9H2X8 130 aa7.42□□□□□ -1.22
UBR4-216ENST00000494503 MBNL3Q9NUK0 354 aaKnown RBP7.42□□□□□ -1.22
UBR4-216ENST00000494503 CNOT2Q9NZN8 540 aaKnown RBP7.42□□□□□ -1.22
UBR4-216ENST00000494503 SLC23A1Q9UHI7 598 aa7.42□□□□□ -1.22
UBR4-216ENST00000494503 DIMT1Q9UNQ2 313 aaKnown RBP7.42□□□□□ -1.22
UBR4-216ENST00000494503 GAB2Q9UQC2 676 aa7.42□□□□□ -1.22
UBR4-216ENST00000494503 WASHC3Q9Y3C0 194 aa7.42□□□□□ -1.22
UBR4-216ENST00000494503 HUWE1Q7Z6Z7 4374 aaKnown RBP7.41□□□□□ -1.22
UBR4-216ENST00000494503 H0YJW9 148 aa7.41□□□□□ -1.22
UBR4-216ENST00000494503 SC5DO75845 299 aa7.41□□□□□ -1.22
UBR4-216ENST00000494503 TFAP2AP05549 437 aa7.41□□□□□ -1.22
UBR4-216ENST00000494503 GLAP06280 429 aa7.41□□□□□ -1.22
UBR4-216ENST00000494503 MAPK3P27361 379 aaPredicted RBP7.41□□□□□ -1.22
UBR4-216ENST00000494503 MC5RP33032 325 aa7.41□□□□□ -1.22
UBR4-216ENST00000494503 RPS11P62280 158 aaKnown RBP eCLIP7.41□□□□□ -1.22
UBR4-216ENST00000494503 DEFA5Q01523 94 aa7.41□□□□□ -1.22
UBR4-216ENST00000494503 ZNF554Q86TJ5 538 aa7.41□□□□□ -1.22
UBR4-216ENST00000494503 GTSCR1Q86UQ5 136 aa7.41□□□□□ -1.22
UBR4-216ENST00000494503 GAPTQ8N292 157 aa7.41□□□□□ -1.22
UBR4-216ENST00000494503 PQLC1Q8N2U9 271 aa7.41□□□□□ -1.22
UBR4-216ENST00000494503 OR5T1Q8NG75 326 aa7.41□□□□□ -1.22
UBR4-216ENST00000494503 PGLYRP3Q96LB9 341 aa7.41□□□□□ -1.22
UBR4-216ENST00000494503 SPATA25Q9BR10 227 aa7.41□□□□□ -1.22
UBR4-216ENST00000494503 TMEM59Q9BXS4 323 aa7.41□□□□□ -1.22
UBR4-216ENST00000494503 KCNK15Q9H427 330 aa7.41□□□□□ -1.22
UBR4-216ENST00000494503 SLA2Q9H6Q3 261 aa7.41□□□□□ -1.22
UBR4-216ENST00000494503 PLEKHJ1Q9NW61 149 aa7.41□□□□□ -1.22
UBR4-216ENST00000494503 LRRC42Q9Y546 428 aa7.41□□□□□ -1.22
UBR4-216ENST00000494503 TRBV5-7A0A0A0MS05 114 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 SLC22A1O15245 554 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 SLC25A17O43808 307 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 GPX5O75715 221 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 RBBP9O75884 186 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 APOA2P02652 100 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 IFNA6P05013 189 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 CT45A6P0DMU7 189 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 CT45A5P0DMU8 189 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 CT45A7P0DMV0 189 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 ZP3P21754 424 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 CEACAM6P40199 344 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 ST3GAL4Q11206 333 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 FXYD3Q14802 87 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 HMGN3Q15651 99 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 GLT8D1Q68CQ7 371 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 FAM71F2Q6NXP2 309 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 AHSA2Q719I0 299 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 LYPD6Q86Y78 171 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 SVOPQ8N4V2 548 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 SETD9Q8NE22 299 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 TSNAXQ99598 290 aaKnown RBP7.4□□□□□ -1.22
UBR4-216ENST00000494503 PHB2Q99623 299 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 TM2D3Q9BRN9 247 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 UQCC2Q9BRT2 126 aa7.4□□□□□ -1.22
UBR4-216ENST00000494503 PARP12Q9H0J9 701 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms