RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 MED6O75586 246 aa10.8□□□□□ -0.68
HDAC3-213ENST00000492506 JTBO76095 146 aa10.8□□□□□ -0.68
HDAC3-213ENST00000492506 TOX4O94842 621 aa10.8□□□□□ -0.68
HDAC3-213ENST00000492506 OR2C1O95371 312 aa10.8□□□□□ -0.68
HDAC3-213ENST00000492506 IGHV1-69P01742 117 aa10.8□□□□□ -0.68
HDAC3-213ENST00000492506 HLA-AP01891 365 aaKnown RBP10.8□□□□□ -0.68
HDAC3-213ENST00000492506 ZBTB25P24278 435 aa10.8□□□□□ -0.68
HDAC3-213ENST00000492506 GATA4P43694 442 aa10.8□□□□□ -0.68
HDAC3-213ENST00000492506 ATP1B3P54709 279 aa10.8□□□□□ -0.68
HDAC3-213ENST00000492506 NDUFA6P56556 154 aa10.8□□□□□ -0.68
HDAC3-213ENST00000492506 OR12D2P58182 307 aa10.8□□□□□ -0.68
HDAC3-213ENST00000492506 RPS11P62280 158 aaKnown RBP eCLIP10.8□□□□□ -0.68
HDAC3-213ENST00000492506 SRSF3P84103 164 aaKnown RBP10.8□□□□□ -0.68
HDAC3-213ENST00000492506 HOXA4Q00056 320 aaPredicted RBP10.8□□□□□ -0.68
HDAC3-213ENST00000492506 GAMTQ14353 236 aa10.8□□□□□ -0.68
HDAC3-213ENST00000492506 JOSD1Q15040 202 aaPredicted RBP10.8□□□□□ -0.68
HDAC3-213ENST00000492506 SURF2Q15527 256 aaPredicted RBP10.8□□□□□ -0.68
HDAC3-213ENST00000492506 AKR1C8PQ5T2L2 129 aa10.8□□□□□ -0.68
HDAC3-213ENST00000492506 OR4K15Q8NH41 348 aa10.8□□□□□ -0.68
HDAC3-213ENST00000492506 YPEL4Q96NS1 127 aa10.8□□□□□ -0.68
HDAC3-213ENST00000492506 SIRPDQ9H106 197 aa10.8□□□□□ -0.68
HDAC3-213ENST00000492506 FAM212BQ9NTI7 297 aaPredicted RBP10.8□□□□□ -0.68
HDAC3-213ENST00000492506 CTSZQ9UBR2 303 aa10.8□□□□□ -0.68
HDAC3-213ENST00000492506 KCNG2Q9UJ96 466 aa10.8□□□□□ -0.68
HDAC3-213ENST00000492506 FBXO7Q9Y3I1 522 aa10.8□□□□□ -0.68
HDAC3-213ENST00000492506 TENM3Q9P273 2699 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 hCG_1809904A0A1W2PP81 198 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 A0A1W2PR64 198 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 A0A1W2PRV1 198 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 LRRC30A6NM36 301 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 J3QW42 95 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 DLEU1O43261 78 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 PIP5K1CO60331 668 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 FCN3O75636 299 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 SCGNO76038 276 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 DFFBO76075 338 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 DUS4LO95620 317 aaKnown RBP10.79□□□□□ -0.68
HDAC3-213ENST00000492506 CYB5AP00167 134 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 CST4P01036 141 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 LIPFP07098 398 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 DBHP09172 617 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 PGAM2P15259 253 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 GUCA1AP43080 201 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-213ENST00000492506 NPY4RP50391 375 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 CTXN1P60606 82 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 LSM6P62312 80 aaKnown RBP10.79□□□□□ -0.68
HDAC3-213ENST00000492506 FAM3AP98173 230 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 CLINT1Q14677 625 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 Q499Y3 187 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 ACTBL2Q562R1 376 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 ZNF529Q6P280 563 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 C1orf87Q8N0U7 546 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 PIP4P2Q8N4L2 257 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 BOLLQ8N9W6 283 aaKnown RBP10.79□□□□□ -0.68
HDAC3-213ENST00000492506 Q8TCH9 128 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 PELI1Q96FA3 418 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 CPNE2Q96FN4 548 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-213ENST00000492506 SCGB3A2Q96PL1 93 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 OR14A2Q96R54 314 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 TBX5Q99593 518 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 SLC35B3Q9H1N7 401 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 TMEM231Q9H6L2 316 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 PITPNC1Q9UKF7 332 aa10.79□□□□□ -0.68
HDAC3-213ENST00000492506 IQCF6A8MYZ5 107 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 B4DEV8 164 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 H7C1C5 153 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 ITGB1BP1O14713 200 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 GLCEO94923 617 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 PPP1R3DO95685 299 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 OPN1MWP04001 364 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 RD3LP0DJH9 198 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 OPN1MW2P0DN77 364 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 OPN1MW3P0DN78 364 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 SLC6A6P31641 620 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 KIR3DL2P43630 455 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 RPS10P46783 165 aaKnown RBP10.78□□□□□ -0.68
HDAC3-213ENST00000492506 LCN6P62502 163 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 UBE2V2Q15819 145 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 OTPQ5XKR4 325 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 FAM220AQ7Z4H9 259 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 NRMQ8IXM6 262 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 SLC35F2Q8IXU6 374 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 PRSS35Q8N3Z0 413 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 PRR18Q8N4B5 295 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 OR13C3Q8NGS6 347 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 OR13C8Q8NGS7 320 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 OR1F12Q8NHA8 337 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 HPSE2Q8WWQ2 592 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 LHX4Q969G2 390 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 RASD2Q96D21 266 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 AKR1E2Q96JD6 320 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 RSRP1Q9BUV0 290 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 GAL3ST2Q9H3Q3 398 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 RAB18Q9NP72 206 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 MED31Q9Y3C7 131 aa10.78□□□□□ -0.68
HDAC3-213ENST00000492506 TRBV5-5A0A0J9YX44 114 aa10.77□□□□□ -0.69
HDAC3-213ENST00000492506 ZNF816-ZNF321PA0A0X1KG74 233 aa10.77□□□□□ -0.69
HDAC3-213ENST00000492506 A6NIZ1 184 aa10.77□□□□□ -0.69
HDAC3-213ENST00000492506 UMAD1C9J7I0 102 aa10.77□□□□□ -0.69
HDAC3-213ENST00000492506 RAB27BO00194 218 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms