RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 RNF114Q9Y508 228 aa10.28□□□□□ -0.76
LIMK1-207ENST00000491052 MMP24Q9Y5R2 645 aa10.28□□□□□ -0.76
LIMK1-207ENST00000491052 CCDC160A6NGH7 325 aa10.27□□□□□ -0.77
LIMK1-207ENST00000491052 TSPAN9O75954 239 aa10.27□□□□□ -0.77
LIMK1-207ENST00000491052 OR2F2O95006 317 aa10.27□□□□□ -0.77
LIMK1-207ENST00000491052 APOA1P02647 267 aa10.27□□□□□ -0.77
LIMK1-207ENST00000491052 PTHLHP12272 177 aa10.27□□□□□ -0.77
LIMK1-207ENST00000491052 TMEM11P17152 192 aa10.27□□□□□ -0.77
LIMK1-207ENST00000491052 SOX6P35712 828 aa10.27□□□□□ -0.77
LIMK1-207ENST00000491052 TAS2R20P59543 309 aa10.27□□□□□ -0.77
LIMK1-207ENST00000491052 HNF4GQ14541 408 aa10.27□□□□□ -0.77
LIMK1-207ENST00000491052 SRSF7Q16629 238 aaKnown RBP eCLIP10.27□□□□□ -0.77
LIMK1-207ENST00000491052 ARSJQ5FYB0 599 aaPredicted RBP10.27□□□□□ -0.77
LIMK1-207ENST00000491052 C16orf82Q7Z2V1 217 aa10.27□□□□□ -0.77
LIMK1-207ENST00000491052 ODF3L1Q8IXM7 274 aa10.27□□□□□ -0.77
LIMK1-207ENST00000491052 OR2T6Q8NHC8 308 aa10.27□□□□□ -0.77
LIMK1-207ENST00000491052 LINC01006Q8NI28 216 aa10.27□□□□□ -0.77
LIMK1-207ENST00000491052 RBM14Q96PK6 669 aaKnown RBP10.27□□□□□ -0.77
LIMK1-207ENST00000491052 MRPL20Q9BYC9 149 aaKnown RBP10.27□□□□□ -0.77
LIMK1-207ENST00000491052 PIPOXQ9P0Z9 390 aa10.27□□□□□ -0.77
LIMK1-207ENST00000491052 SIGLEC9Q9Y336 463 aa10.27□□□□□ -0.77
LIMK1-207ENST00000491052 PLXNB1O43157 2135 aa10.27□□□□□ -0.77
LIMK1-207ENST00000491052 TRBV6-7A0A0A0MS04 114 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 SMIM31A0A1B0GVY4 71 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 MEIS3P1A6NDR6 274 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 FAM90A9PA6NNJ1 464 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 FAM25AB3EWG3 89 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 FAM25CB3EWG5 89 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 FAM25GB3EWG6 89 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 H3BMQ9 156 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 HAX1O00165 279 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 ITGB1BP1O14713 200 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 RAB29O14966 203 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 DIRAS3O95661 229 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 FCER2P06734 321 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 ELK1P19419 428 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 GPR12P47775 334 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 HABP2Q14520 560 aaPredicted RBP10.26□□□□□ -0.77
LIMK1-207ENST00000491052 RPL39P5Q59GN2 51 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 ZNF833PQ6ZTB9 187 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 THNSL2Q86YJ6 484 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 ISOC1Q96CN7 298 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 S1PR3Q99500 378 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 PRSS22Q9GZN4 317 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 C16orf95Q9H693 158 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 ZNF702PQ9H963 129 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 IFT46Q9NQC8 304 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 ZNF221Q9UK13 617 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 RNF150Q9ULK6 438 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 MRPS7Q9Y2R9 242 aaKnown RBP10.26□□□□□ -0.77
LIMK1-207ENST00000491052 MOB4Q9Y3A3 225 aa10.26□□□□□ -0.77
LIMK1-207ENST00000491052 ZNF736B4DX44 427 aaPredicted RBP10.25□□□□□ -0.77
LIMK1-207ENST00000491052 CD1BP29016 333 aa10.25□□□□□ -0.77
LIMK1-207ENST00000491052 ARPC4P59998 168 aa10.25□□□□□ -0.77
LIMK1-207ENST00000491052 LSAMPQ13449 338 aa10.25□□□□□ -0.77
LIMK1-207ENST00000491052 FAM71F2Q6NXP2 309 aa10.25□□□□□ -0.77
LIMK1-207ENST00000491052 GVQW1Q8N7I0 195 aa10.25□□□□□ -0.77
LIMK1-207ENST00000491052 BEST4Q8NFU0 473 aa10.25□□□□□ -0.77
LIMK1-207ENST00000491052 OR2T10Q8NGZ9 312 aa10.25□□□□□ -0.77
LIMK1-207ENST00000491052 WFDC12Q8WWY7 111 aa10.25□□□□□ -0.77
LIMK1-207ENST00000491052 EAF1Q96JC9 268 aaPredicted RBP10.25□□□□□ -0.77
LIMK1-207ENST00000491052 CMTM3Q96MX0 182 aa10.25□□□□□ -0.77
LIMK1-207ENST00000491052 NABP2Q9BQ15 211 aa10.25□□□□□ -0.77
LIMK1-207ENST00000491052 CCDC59Q9P031 241 aaKnown RBP10.25□□□□□ -0.77
LIMK1-207ENST00000491052 ANXA10Q9UJ72 324 aa10.25□□□□□ -0.77
LIMK1-207ENST00000491052 RBM7Q9Y580 266 aaKnown RBP10.25□□□□□ -0.77
LIMK1-207ENST00000491052 SH2D7A6NKC9 451 aaPredicted RBP10.24□□□□□ -0.77
LIMK1-207ENST00000491052 M0QZK8 103 aa10.24□□□□□ -0.77
LIMK1-207ENST00000491052 RGS5O15539 181 aa10.24□□□□□ -0.77
LIMK1-207ENST00000491052 MOSP00540 346 aa10.24□□□□□ -0.77
LIMK1-207ENST00000491052 CTXN2P0C2S0 81 aa10.24□□□□□ -0.77
LIMK1-207ENST00000491052 OR8U9P0C7N5 309 aa10.24□□□□□ -0.77
LIMK1-207ENST00000491052 PRSS3P35030 304 aa10.24□□□□□ -0.77
LIMK1-207ENST00000491052 CBX5P45973 191 aa10.24□□□□□ -0.77
LIMK1-207ENST00000491052 PROK1P58294 105 aa10.24□□□□□ -0.77
LIMK1-207ENST00000491052 BLCAPP62952 87 aa10.24□□□□□ -0.77
LIMK1-207ENST00000491052 ABCA11PQ4W5N1 156 aa10.24□□□□□ -0.77
LIMK1-207ENST00000491052 C9orf152Q5JTZ5 239 aa10.24□□□□□ -0.77
LIMK1-207ENST00000491052 CNIH2Q6PI25 160 aa10.24□□□□□ -0.77
LIMK1-207ENST00000491052 HOGA1Q86XE5 327 aa10.24□□□□□ -0.77
LIMK1-207ENST00000491052 SNX29P2Q8IUI4 249 aa10.24□□□□□ -0.77
LIMK1-207ENST00000491052 H1FOOQ8IZA3 346 aaPredicted RBP10.24□□□□□ -0.77
LIMK1-207ENST00000491052 OR8U1Q8NH10 309 aa10.24□□□□□ -0.77
LIMK1-207ENST00000491052 DYNC2LI1Q8TCX1 351 aa10.24□□□□□ -0.77
LIMK1-207ENST00000491052 RBMXL1Q96E39 390 aaKnown RBP10.24□□□□□ -0.77
LIMK1-207ENST00000491052 ZNF251Q9BRH9 671 aa10.24□□□□□ -0.77
LIMK1-207ENST00000491052 AGMATQ9BSE5 352 aa10.24□□□□□ -0.77
LIMK1-207ENST00000491052 ZNF747Q9BV97 191 aa10.24□□□□□ -0.77
LIMK1-207ENST00000491052 OR2D2Q9H210 308 aa10.24□□□□□ -0.77
LIMK1-207ENST00000491052 GHITMQ9H3K2 345 aa10.24□□□□□ -0.77
LIMK1-207ENST00000491052 CEPT1Q9Y6K0 416 aa10.24□□□□□ -0.77
LIMK1-207ENST00000491052 NCBP2LA6PVI3 153 aaKnown RBP10.23□□□□□ -0.77
LIMK1-207ENST00000491052 J3QRK9 145 aa10.23□□□□□ -0.77
LIMK1-207ENST00000491052 M0R1X1 148 aa10.23□□□□□ -0.77
LIMK1-207ENST00000491052 NFYAP23511 347 aaPredicted RBP10.23□□□□□ -0.77
LIMK1-207ENST00000491052 EBI3Q14213 229 aa10.23□□□□□ -0.77
LIMK1-207ENST00000491052 TMEM95Q3KNT9 176 aa10.23□□□□□ -0.77
LIMK1-207ENST00000491052 SHISA2Q6UWI4 295 aa10.23□□□□□ -0.77
LIMK1-207ENST00000491052 FAM131AQ6UXB0 335 aa10.23□□□□□ -0.77
LIMK1-207ENST00000491052 GLDNQ6ZMI3 551 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms