RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 KPRPQ5T749 579 aaPredicted RBP12□□□□□ -0.49
COL27A1-206ENST00000490831 SAMD5Q5TGI4 173 aa12□□□□□ -0.49
COL27A1-206ENST00000490831 FOXRED2Q8IWF2 684 aa12□□□□□ -0.49
COL27A1-206ENST00000490831 STPG2Q8N412 459 aa12□□□□□ -0.49
COL27A1-206ENST00000490831 COMMD1Q8N668 190 aa12□□□□□ -0.49
COL27A1-206ENST00000490831 EDARADDQ8WWZ3 215 aa12□□□□□ -0.49
COL27A1-206ENST00000490831 NOL4LQ96MY1 436 aaPredicted RBP12□□□□□ -0.49
COL27A1-206ENST00000490831 OR51E2Q9H255 320 aa12□□□□□ -0.49
COL27A1-206ENST00000490831 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12□□□□□ -0.49
COL27A1-206ENST00000490831 OR1A1Q9P1Q5 309 aa12□□□□□ -0.49
COL27A1-206ENST00000490831 METTL21EPA6NDL7 271 aa11.99□□□□□ -0.49
COL27A1-206ENST00000490831 LINC01548A6NM66 108 aa11.99□□□□□ -0.49
COL27A1-206ENST00000490831 SERPINE3A8MV23 424 aa11.99□□□□□ -0.49
COL27A1-206ENST00000490831 AP4M1O00189 453 aa11.99□□□□□ -0.49
COL27A1-206ENST00000490831 FCGR3AP08637 254 aa11.99□□□□□ -0.49
COL27A1-206ENST00000490831 CD3GP09693 182 aa11.99□□□□□ -0.49
COL27A1-206ENST00000490831 SLC2A2P11168 524 aaPredicted RBP11.99□□□□□ -0.49
COL27A1-206ENST00000490831 CEACAM6P40199 344 aa11.99□□□□□ -0.49
COL27A1-206ENST00000490831 SRSF7Q16629 238 aaKnown RBP eCLIP11.99□□□□□ -0.49
COL27A1-206ENST00000490831 PDLIM3Q53GG5 364 aaPredicted RBP11.99□□□□□ -0.49
COL27A1-206ENST00000490831 ZNF329Q86UD4 541 aa11.99□□□□□ -0.49
COL27A1-206ENST00000490831 WFDC9Q8NEX5 89 aa11.99□□□□□ -0.49
COL27A1-206ENST00000490831 OR4A4PQ8NGN8 299 aa11.99□□□□□ -0.49
COL27A1-206ENST00000490831 RBMXL1Q96E39 390 aaKnown RBP11.99□□□□□ -0.49
COL27A1-206ENST00000490831 RASL11BQ9BPW5 248 aa11.99□□□□□ -0.49
COL27A1-206ENST00000490831 CABLES2Q9BTV7 478 aa11.99□□□□□ -0.49
COL27A1-206ENST00000490831 C11orf54Q9H0W9 315 aaPredicted RBP11.99□□□□□ -0.49
COL27A1-206ENST00000490831 A0A1W2PRX2 142 aa11.98□□□□□ -0.49
COL27A1-206ENST00000490831 CT45A6P0DMU7 189 aa11.98□□□□□ -0.49
COL27A1-206ENST00000490831 CT45A5P0DMU8 189 aa11.98□□□□□ -0.49
COL27A1-206ENST00000490831 CT45A7P0DMV0 189 aa11.98□□□□□ -0.49
COL27A1-206ENST00000490831 GNB3P16520 340 aa11.98□□□□□ -0.49
COL27A1-206ENST00000490831 SERPINB10P48595 397 aa11.98□□□□□ -0.49
COL27A1-206ENST00000490831 ACTBP60709 375 aa11.98□□□□□ -0.49
COL27A1-206ENST00000490831 KIR2DS1Q14954 304 aa11.98□□□□□ -0.49
COL27A1-206ENST00000490831 ARL6IP1Q15041 203 aa11.98□□□□□ -0.49
COL27A1-206ENST00000490831 BEAN1Q3B7T3 259 aa11.98□□□□□ -0.49
COL27A1-206ENST00000490831 RPL39P5Q59GN2 51 aa11.98□□□□□ -0.49
COL27A1-206ENST00000490831 Q6ZS49 121 aa11.98□□□□□ -0.49
COL27A1-206ENST00000490831 NPBQ8NG41 125 aa11.98□□□□□ -0.49
COL27A1-206ENST00000490831 KCTD7Q96MP8 289 aa11.98□□□□□ -0.49
COL27A1-206ENST00000490831 PRKDCP78527 4128 aaKnown RBP11.98□□□□□ -0.49
COL27A1-206ENST00000490831 SMIM30A4D0T7 59 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 OR5H14A6NHG9 310 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 G3V4G9 280 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 FABP7O15540 132 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 HSPA12AO43301 675 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 PROP1O75360 226 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 NDUFA3O95167 84 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 IGF1P05019 195 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 SDC2P34741 201 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 SOX6P35712 828 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 SCAND1P57086 179 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 SLC35B1P78383 322 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 MRPS15P82914 257 aaKnown RBP11.97□□□□□ -0.49
COL27A1-206ENST00000490831 MMDQ15546 238 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 SFXN4Q6P4A7 337 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 RNF152Q8N8N0 203 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 OR5AN1Q8NGI8 311 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 PHF21AQ96BD5 680 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 ABHD14BQ96IU4 210 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 RITA1Q96K30 269 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 HSPB9Q9BQS6 159 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 GON7Q9BXV9 100 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 ZFP57Q9NU63 452 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 LINC00527Q9UJ94 153 aa11.97□□□□□ -0.49
COL27A1-206ENST00000490831 TRBV6-7A0A0A0MS04 114 aa11.96□□□□□ -0.49
COL27A1-206ENST00000490831 H0YJW9 148 aa11.96□□□□□ -0.49
COL27A1-206ENST00000490831 NBR2O15453 112 aa11.96□□□□□ -0.49
COL27A1-206ENST00000490831 HLA-DRB1P01911 266 aa11.96□□□□□ -0.49
COL27A1-206ENST00000490831 CD36P16671 472 aa11.96□□□□□ -0.49
COL27A1-206ENST00000490831 SLC6A1P30531 599 aa11.96□□□□□ -0.49
COL27A1-206ENST00000490831 MC5RP33032 325 aa11.96□□□□□ -0.49
COL27A1-206ENST00000490831 RPL23AP62750 156 aaKnown RBP11.96□□□□□ -0.49
COL27A1-206ENST00000490831 CFHR3Q02985 330 aa11.96□□□□□ -0.49
COL27A1-206ENST00000490831 NEDD8Q15843 81 aa11.96□□□□□ -0.49
COL27A1-206ENST00000490831 C1QL4Q86Z23 238 aa11.96□□□□□ -0.49
COL27A1-206ENST00000490831 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.96□□□□□ -0.49
COL27A1-206ENST00000490831 CHCHD6Q9BRQ6 235 aa11.96□□□□□ -0.49
COL27A1-206ENST00000490831 ATG5Q9H1Y0 275 aa11.96□□□□□ -0.49
COL27A1-206ENST00000490831 RDH8Q9NYR8 311 aa11.96□□□□□ -0.49
COL27A1-206ENST00000490831 DAPK2Q9UIK4 370 aa11.96□□□□□ -0.49
COL27A1-206ENST00000490831 GAB2Q9UQC2 676 aa11.96□□□□□ -0.49
COL27A1-206ENST00000490831 RRP9O43818 475 aaKnown RBP11.95□□□□□ -0.5
COL27A1-206ENST00000490831 RBBP9O75884 186 aa11.95□□□□□ -0.5
COL27A1-206ENST00000490831 SCGNO76038 276 aa11.95□□□□□ -0.5
COL27A1-206ENST00000490831 GSTT2P0CG29 244 aa11.95□□□□□ -0.5
COL27A1-206ENST00000490831 GSTT2BP0CG30 244 aa11.95□□□□□ -0.5
COL27A1-206ENST00000490831 PF4V1P10720 104 aa11.95□□□□□ -0.5
COL27A1-206ENST00000490831 DTYMKP23919 212 aa11.95□□□□□ -0.5
COL27A1-206ENST00000490831 CNTFRP26992 372 aa11.95□□□□□ -0.5
COL27A1-206ENST00000490831 PNLIPRP3Q17RR3 467 aa11.95□□□□□ -0.5
COL27A1-206ENST00000490831 C5orf64Q2M2E5 130 aa11.95□□□□□ -0.5
COL27A1-206ENST00000490831 TEX38Q6PEX7 206 aa11.95□□□□□ -0.5
COL27A1-206ENST00000490831 FAM131AQ6UXB0 335 aa11.95□□□□□ -0.5
COL27A1-206ENST00000490831 RNF5Q99942 180 aa11.95□□□□□ -0.5
COL27A1-206ENST00000490831 CENPOQ9BU64 300 aa11.95□□□□□ -0.5
COL27A1-206ENST00000490831 RNF167Q9H6Y7 350 aa11.95□□□□□ -0.5
COL27A1-206ENST00000490831 ZNF107Q9UII5 783 aaPredicted RBP11.95□□□□□ -0.5
COL27A1-206ENST00000490831 A0A075B6Q4 140 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms