RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 TAF9BQ9HBM6 251 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 RANGRFQ9HD47 186 aaPredicted RBP6.24□□□□□ -1.41
USP39-216ENST00000490193 OR2S2Q9NQN1 319 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 ERVK13-1Q9NX77 482 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 ETAA1Q9NY74 926 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 CNOT2Q9NZN8 540 aaKnown RBP6.24□□□□□ -1.41
USP39-216ENST00000490193 SAA2-SAA4A0A096LPE2 208 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 SHISA3A0PJX4 238 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 FAM90A7PA6NKC0 464 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 FAM90A23PA8MXZ1 464 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 H3BUA1 57 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 FCN1O00602 326 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 RBBP9O75884 186 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 FADS2O95864 444 aaKnown RBP6.23□□□□□ -1.41
USP39-216ENST00000490193 SAA2P0DJI9 122 aaPredicted RBP6.23□□□□□ -1.41
USP39-216ENST00000490193 FCGR1AP12314 374 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 NAT1P18440 290 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 CD40LGP29965 261 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 BDKRB2P30411 391 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 PPP1CCP36873 323 aaKnown RBP6.23□□□□□ -1.41
USP39-216ENST00000490193 OR3A3P47888 321 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 SOX2P48431 317 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 GBX2P52951 348 aaPredicted RBP6.23□□□□□ -1.41
USP39-216ENST00000490193 PPP3R1P63098 170 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 SLC22A6Q4U2R8 563 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 RAB12Q6IQ22 244 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 LCN12Q6JVE5 192 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 UNQ5815/PRO19632Q6UWF5 114 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 FAM131AQ6UXB0 335 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 ZNF562Q6V9R5 426 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 AMIGO2Q86SJ2 522 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 PPP1R27Q86WC6 154 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 Q8N402 240 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 PRR18Q8N4B5 295 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 RNF5Q99942 180 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 IFI27L2Q9H2X8 130 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 TUBA4BQ9H853 241 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 RETNQ9HD89 108 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 OAZ3Q9UMX2 235 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 AP4S1Q9Y587 144 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 CEPT1Q9Y6K0 416 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 A3GALT2U3KPV4 340 aa6.23□□□□□ -1.41
USP39-216ENST00000490193 A0A0G2JLM5 398 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 OR5H14A6NHG9 310 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 GPX5O75715 221 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 BRI3O95415 125 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 TRGV3P03979 118 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 ALPLP05186 524 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 IGFBP3P17936 291 aaPredicted RBP6.22□□□□□ -1.41
USP39-216ENST00000490193 GABRB1P18505 474 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 MC5RP33032 325 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 MECP2P51608 486 aaKnown RBP6.22□□□□□ -1.41
USP39-216ENST00000490193 CCDC58Q4VC31 144 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 C6orf141Q5SZD1 244 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 RNLSQ5VYX0 342 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 LAX1Q8IWV1 398 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 LFNGQ8NES3 379 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 OR52L2PQ8NGH6 319 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 OR5AN1Q8NGI8 311 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 OR2K2Q8NGT1 345 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 CENPNQ96H22 339 aaPredicted RBP6.22□□□□□ -1.41
USP39-216ENST00000490193 MS4A10Q96PG2 267 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 ZNF184Q99676 751 aaPredicted RBP6.22□□□□□ -1.41
USP39-216ENST00000490193 FAM103A1Q9BTL3 118 aaKnown RBP6.22□□□□□ -1.41
USP39-216ENST00000490193 TMED9Q9BVK6 235 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 MRPS18AQ9NVS2 196 aaKnown RBP6.22□□□□□ -1.41
USP39-216ENST00000490193 KCNIP1Q9NZI2 227 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 PIPOXQ9P0Z9 390 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 GAB2Q9UQC2 676 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 LRRC42Q9Y546 428 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 PEX16Q9Y5Y5 336 aa6.22□□□□□ -1.41
USP39-216ENST00000490193 H0YJW9 148 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 RAB29O14966 203 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 SPDEFO95238 335 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 MAS1P04201 325 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 CSN3P07498 182 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 LIMS3P0CW19 117 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 LIMS4P0CW20 117 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 CT45A6P0DMU7 189 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 CT45A5P0DMU8 189 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 CT45A7P0DMV0 189 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 FSTP19883 344 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 FUT3P21217 361 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 GTF2A1P52655 376 aaPredicted RBP6.21□□□□□ -1.42
USP39-216ENST00000490193 RIPK1Q13546 671 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 PLGLAQ15195 96 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 HMGN3Q15651 99 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 DMKNQ6E0U4 476 aaPredicted RBP6.21□□□□□ -1.42
USP39-216ENST00000490193 XAF1Q6GPH4 301 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 SIGIRRQ6IA17 410 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 RPL22L1Q6P5R6 122 aaKnown RBP6.21□□□□□ -1.42
USP39-216ENST00000490193 CDH26Q8IXH8 852 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 POC5Q8NA72 575 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 OR2AK2Q8NG84 335 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 MRPL30Q8TCC3 161 aaKnown RBP6.21□□□□□ -1.42
USP39-216ENST00000490193 ABHD5Q8WTS1 349 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 GHSRQ92847 366 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 GALMQ96C23 342 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 Q96M66 194 aa6.21□□□□□ -1.42
USP39-216ENST00000490193 RDH12Q96NR8 316 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms