RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 FAM215AQ9Y5M1 114 aa1□□□□□ -2.25
CCDC39-206ENST00000489868 PUS1Q9Y606 427 aaKnown RBP eCLIP1□□□□□ -2.25
CCDC39-206ENST00000489868 NUMA1Q14980 2115 aa1□□□□□ -2.25
CCDC39-206ENST00000489868 NOTCH1P46531 2555 aa1□□□□□ -2.25
CCDC39-206ENST00000489868 DSCAMO60469 2012 aa0.99□□□□□ -2.25
CCDC39-206ENST00000489868 RFPL4AA6NLU0 287 aa0.99□□□□□ -2.25
CCDC39-206ENST00000489868 RFPL4AL1F8VTS6 287 aa0.99□□□□□ -2.25
CCDC39-206ENST00000489868 H0YC42 278 aa0.99□□□□□ -2.25
CCDC39-206ENST00000489868 LDOC1O95751 146 aaPredicted RBP0.99□□□□□ -2.25
CCDC39-206ENST00000489868 LCN1P31025 176 aa0.99□□□□□ -2.25
CCDC39-206ENST00000489868 OPRM1P35372 400 aa0.99□□□□□ -2.25
CCDC39-206ENST00000489868 GTF2BQ00403 316 aa0.99□□□□□ -2.25
CCDC39-206ENST00000489868 FLOT2Q14254 428 aa0.99□□□□□ -2.25
CCDC39-206ENST00000489868 ZNF791Q3KP31 576 aaPredicted RBP0.99□□□□□ -2.25
CCDC39-206ENST00000489868 LRRC28Q86X40 367 aaPredicted RBP0.99□□□□□ -2.25
CCDC39-206ENST00000489868 LRRC6Q86X45 466 aa0.99□□□□□ -2.25
CCDC39-206ENST00000489868 PLCZ1Q86YW0 608 aa0.99□□□□□ -2.25
CCDC39-206ENST00000489868 LRRC20Q8TCA0 184 aa0.99□□□□□ -2.25
CCDC39-206ENST00000489868 DNAJC12Q9UKB3 198 aa0.99□□□□□ -2.25
CCDC39-206ENST00000489868 C2orf74A8MZ97 194 aa0.98□□□□□ -2.25
CCDC39-206ENST00000489868 SNAP29O95721 258 aa0.98□□□□□ -2.25
CCDC39-206ENST00000489868 ERHP84090 104 aaKnown RBP0.98□□□□□ -2.25
CCDC39-206ENST00000489868 FAM3AP98173 230 aa0.98□□□□□ -2.25
CCDC39-206ENST00000489868 SLC38A11Q08AI6 406 aa0.98□□□□□ -2.25
CCDC39-206ENST00000489868 PSG3Q16557 428 aa0.98□□□□□ -2.25
CCDC39-206ENST00000489868 ABHD14BQ96IU4 210 aa0.98□□□□□ -2.25
CCDC39-206ENST00000489868 FAM210AQ96ND0 272 aa0.98□□□□□ -2.25
CCDC39-206ENST00000489868 MED28Q9H204 178 aa0.98□□□□□ -2.25
CCDC39-206ENST00000489868 HHLA2Q9UM44 414 aa0.98□□□□□ -2.25
CCDC39-206ENST00000489868 DISP1Q96F81 1524 aa0.98□□□□□ -2.25
CCDC39-206ENST00000489868 FBN2P35556 2912 aa0.97□□□□□ -2.25
CCDC39-206ENST00000489868 GRIFINA4D1Z8 144 aa0.97□□□□□ -2.25
CCDC39-206ENST00000489868 OR11H12B2RN74 326 aa0.97□□□□□ -2.25
CCDC39-206ENST00000489868 M0QYV0 167 aa0.97□□□□□ -2.25
CCDC39-206ENST00000489868 NDUFS8O00217 210 aa0.97□□□□□ -2.25
CCDC39-206ENST00000489868 IGLV3-27P01718 113 aa0.97□□□□□ -2.25
CCDC39-206ENST00000489868 C1QCP02747 245 aa0.97□□□□□ -2.25
CCDC39-206ENST00000489868 LIMS3P0CW19 117 aa0.97□□□□□ -2.25
CCDC39-206ENST00000489868 LIMS4P0CW20 117 aa0.97□□□□□ -2.25
CCDC39-206ENST00000489868 OR13C7P0DN81 318 aa0.97□□□□□ -2.25
CCDC39-206ENST00000489868 XCL1P47992 114 aa0.97□□□□□ -2.25
CCDC39-206ENST00000489868 PSMD7P51665 324 aa0.97□□□□□ -2.25
CCDC39-206ENST00000489868 OR11H2Q8NH07 326 aa0.97□□□□□ -2.25
CCDC39-206ENST00000489868 LHFPL5Q8TAF8 219 aa0.97□□□□□ -2.25
CCDC39-206ENST00000489868 SLC35G5Q96KT7 338 aa0.97□□□□□ -2.25
CCDC39-206ENST00000489868 CYSTM1Q9H1C7 97 aa0.97□□□□□ -2.25
CCDC39-206ENST00000489868 KIAA2026Q5HYC2 2103 aa0.97□□□□□ -2.25
CCDC39-206ENST00000489868 TENM3Q9P273 2699 aa0.96□□□□□ -2.26
CCDC39-206ENST00000489868 CLUHO75153 1309 aa0.96□□□□□ -2.26
CCDC39-206ENST00000489868 SLC17A3O00476 420 aa0.96□□□□□ -2.26
CCDC39-206ENST00000489868 CYTH3O43739 400 aa0.96□□□□□ -2.26
CCDC39-206ENST00000489868 ASS1P00966 412 aaKnown RBP0.96□□□□□ -2.26
CCDC39-206ENST00000489868 NUP62P37198 522 aaPredicted RBP0.96□□□□□ -2.26
CCDC39-206ENST00000489868 IDH3GP51553 393 aaPredicted RBP0.96□□□□□ -2.26
CCDC39-206ENST00000489868 CNEP1R1Q8N9A8 125 aa0.96□□□□□ -2.26
CCDC39-206ENST00000489868 ASB17Q8WXJ9 295 aa0.96□□□□□ -2.26
CCDC39-206ENST00000489868 CCDC127Q96BQ5 260 aa0.96□□□□□ -2.26
CCDC39-206ENST00000489868 GNB1LQ9BYB4 327 aa0.96□□□□□ -2.26
CCDC39-206ENST00000489868 BABAM2Q9NXR7 383 aa0.96□□□□□ -2.26
CCDC39-206ENST00000489868 RTTNQ86VV8 2226 aa0.95□□□□□ -2.26
CCDC39-206ENST00000489868 TRAV41A0A0B4J266 112 aa0.95□□□□□ -2.26
CCDC39-206ENST00000489868 STK16O75716 305 aa0.95□□□□□ -2.26
CCDC39-206ENST00000489868 IGHV1-69P01742 117 aa0.95□□□□□ -2.26
CCDC39-206ENST00000489868 CD7P09564 240 aa0.95□□□□□ -2.26
CCDC39-206ENST00000489868 ATP6V0CP27449 155 aa0.95□□□□□ -2.26
CCDC39-206ENST00000489868 RELAQ04206 551 aa0.95□□□□□ -2.26
CCDC39-206ENST00000489868 MESTQ5EB52 335 aa0.95□□□□□ -2.26
CCDC39-206ENST00000489868 TMEM31Q5JXX7 168 aa0.95□□□□□ -2.26
CCDC39-206ENST00000489868 TTC33Q6PID6 262 aaPredicted RBP0.95□□□□□ -2.26
CCDC39-206ENST00000489868 CCDC112Q8NEF3 446 aa0.95□□□□□ -2.26
CCDC39-206ENST00000489868 TNFAIP8L1Q8WVP5 186 aa0.95□□□□□ -2.26
CCDC39-206ENST00000489868 RORBQ92753 470 aa0.95□□□□□ -2.26
CCDC39-206ENST00000489868 ACY3Q96HD9 319 aa0.95□□□□□ -2.26
CCDC39-206ENST00000489868 TMEM56Q96MV1 263 aa0.95□□□□□ -2.26
CCDC39-206ENST00000489868 PGLYRP1O75594 196 aaPredicted RBP0.94□□□□□ -2.26
CCDC39-206ENST00000489868 BRI3O95415 125 aa0.94□□□□□ -2.26
CCDC39-206ENST00000489868 CRYBA1P05813 215 aa0.94□□□□□ -2.26
CCDC39-206ENST00000489868 GP1BAP07359 652 aa0.94□□□□□ -2.26
CCDC39-206ENST00000489868 SLC35E2BP0CK96 405 aa0.94□□□□□ -2.26
CCDC39-206ENST00000489868 NQO2P16083 231 aa0.94□□□□□ -2.26
CCDC39-206ENST00000489868 PABPC1L2AQ5JQF8 200 aa0.94□□□□□ -2.26
CCDC39-206ENST00000489868 DRAM2Q6UX65 266 aa0.94□□□□□ -2.26
CCDC39-206ENST00000489868 LHFPL1Q86WI0 220 aa0.94□□□□□ -2.26
CCDC39-206ENST00000489868 CYGBQ8WWM9 190 aa0.94□□□□□ -2.26
CCDC39-206ENST00000489868 Q96M85 177 aa0.94□□□□□ -2.26
CCDC39-206ENST00000489868 HBEGFQ99075 208 aa0.94□□□□□ -2.26
CCDC39-206ENST00000489868 MIEN1Q9BRT3 115 aa0.94□□□□□ -2.26
CCDC39-206ENST00000489868 COMMD9Q9P000 198 aa0.94□□□□□ -2.26
CCDC39-206ENST00000489868 ANGPT4Q9Y264 503 aa0.94□□□□□ -2.26
CCDC39-206ENST00000489868 CUL9Q8IWT3 2517 aa0.94□□□□□ -2.26
CCDC39-206ENST00000489868 WDR90Q96KV7 1748 aa0.94□□□□□ -2.26
CCDC39-206ENST00000489868 AHNAK2Q8IVF2 5795 aa0.93□□□□□ -2.26
CCDC39-206ENST00000489868 A0A1W2PQD3 144 aa0.93□□□□□ -2.26
CCDC39-206ENST00000489868 PHYHO14832 338 aa0.93□□□□□ -2.26
CCDC39-206ENST00000489868 ZNF737O75373 536 aa0.93□□□□□ -2.26
CCDC39-206ENST00000489868 G6PCP35575 357 aa0.93□□□□□ -2.26
CCDC39-206ENST00000489868 HSPA9P38646 679 aaKnown RBP0.93□□□□□ -2.26
CCDC39-206ENST00000489868 CTAG1AP78358 180 aa0.93□□□□□ -2.26
CCDC39-206ENST00000489868 STX3Q13277 289 aa0.93□□□□□ -2.26
CCDC39-206ENST00000489868 C1DQ13901 141 aaKnown RBP0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms