RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 OR51B6Q9H340 312 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 NARFLQ9H6Q4 476 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 CCL28Q9NRJ3 127 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 RCL1Q9Y2P8 373 aaKnown RBP7.1□□□□□ -1.27
VTI1A-207ENST00000489357 CARHSP1Q9Y2V2 147 aaKnown RBP7.1□□□□□ -1.27
VTI1A-207ENST00000489357 MMP24Q9Y5R2 645 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 WSB1Q9Y6I7 421 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 RTTNQ86VV8 2226 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 PRR14LQ5THK1 2151 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 NOTCH2Q04721 2471 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 UTP20O75691 2785 aaKnown RBP7.1□□□□□ -1.27
VTI1A-207ENST00000489357 CACNA1DQ01668 2161 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 TRGV8A0A0C4DH27 118 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 A0A1W2PR80 420 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 TMEM218A2RU14 115 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 NKX2-6A6NCS4 301 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 BTBD17A6NE02 478 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 SRRM5B3KS81 715 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 SIRPB1O00241 398 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 WRBO00258 174 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 CCL21O00585 134 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 HSPB6O14558 160 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 DFFBO76075 338 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 SCGB1D2O95969 90 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 GRPP07492 148 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 DANCRP0C864 163 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 GLI4P10075 376 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 GZMHP20718 246 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 KLF3P57682 345 aaPredicted RBP7.09□□□□□ -1.27
VTI1A-207ENST00000489357 ERVS71-1P61550 626 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 RPL23AP62750 156 aaKnown RBP7.09□□□□□ -1.27
VTI1A-207ENST00000489357 VAMP2P63027 116 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 NKX6-1P78426 367 aaPredicted RBP7.09□□□□□ -1.27
VTI1A-207ENST00000489357 EWSR1Q01844 656 aaKnown RBP eCLIP7.09□□□□□ -1.27
VTI1A-207ENST00000489357 CATR1Q13166 79 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 TESK1Q15569 626 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 DPPA3Q6W0C5 159 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 FOXRED2Q8IWF2 684 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 ZNF808Q8N4W9 903 aaPredicted RBP7.09□□□□□ -1.27
VTI1A-207ENST00000489357 NUP37Q8NFH4 326 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 OR52M1Q8NGK5 317 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 PLPPR1Q8TBJ4 325 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 C17orf50Q8WW18 174 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 NINJ1Q92982 152 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 DIRC2Q96SL1 478 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 SEC11CQ9BY50 192 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 OPN3Q9H1Y3 402 aaPredicted RBP7.09□□□□□ -1.27
VTI1A-207ENST00000489357 ZDHHC8Q9ULC8 765 aa7.09□□□□□ -1.27
VTI1A-207ENST00000489357 ANKHD1Q8IWZ3 2542 aaKnown RBP7.08□□□□□ -1.28
VTI1A-207ENST00000489357 NAV2Q8IVL1 2488 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 A0A1B0GW64 132 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 ZSCAN5BA6NJL1 495 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 A6NLC8 198 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 A8MXE2 369 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 ITGB1BP1O14713 200 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 HSD17B6O14756 317 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 MGST3O14880 152 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 SPINT2O43291 252 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 ADAM20O43506 726 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 ZG16O60844 167 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 MED6O75586 246 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 CLDN1O95832 211 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 IL2RGP31785 369 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 CDSNQ15517 529 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 ALKBH6Q3KRA9 238 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 PXDC1Q5TGL8 231 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 BTNL8Q6UX41 500 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 ZNF66Q6ZN08 573 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 Q6ZR03 302 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 STX12Q86Y82 276 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 CD300LFQ8TDQ1 290 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 IL1F10Q8WWZ1 152 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 TSNAXQ99598 290 aaKnown RBP7.08□□□□□ -1.28
VTI1A-207ENST00000489357 PARD6GQ9BYG4 376 aaPredicted RBP7.08□□□□□ -1.28
VTI1A-207ENST00000489357 OR2S2Q9NQN1 319 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 SH3BGRL2Q9UJC5 107 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 RNF150Q9ULK6 438 aa7.08□□□□□ -1.28
VTI1A-207ENST00000489357 RBM7Q9Y580 266 aaKnown RBP7.08□□□□□ -1.28
VTI1A-207ENST00000489357 KLF2Q9Y5W3 355 aaPredicted RBP7.08□□□□□ -1.28
VTI1A-207ENST00000489357 ABCA4P78363 2273 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 UNC79Q9P2D8 2635 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 A0A0G2JNJ9 132 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 FAM90A9PA6NNJ1 464 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 H0YL77 283 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 LGALS8O00214 317 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 TOR1AO14656 332 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 PSPNO60542 156 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 ZNF205O95201 554 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 SNAPINO95295 136 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 IGLV2-14P01704 120 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 TNFSF4P23510 183 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 PTAFRP25105 342 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 CEACAM6P40199 344 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 OR3A1P47881 315 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 FABP6P51161 128 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 DVL1P1P54792 670 aaPredicted RBP7.07□□□□□ -1.28
VTI1A-207ENST00000489357 MSMPQ1L6U9 139 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 ZNF474Q6S9Z5 364 aaPredicted RBP7.07□□□□□ -1.28
VTI1A-207ENST00000489357 TMEM108Q6UXF1 575 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 BATF2Q8N1L9 274 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms