RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 KCTD7Q96MP8 289 aa18.02■□□□□ 0.48
COL9A3-213ENST00000489045 PIPOXQ9P0Z9 390 aa18.02■□□□□ 0.48
COL9A3-213ENST00000489045 SLC23A1Q9UHI7 598 aa18.02■□□□□ 0.48
COL9A3-213ENST00000489045 ZNF580Q9UK33 172 aa18.02■□□□□ 0.48
COL9A3-213ENST00000489045 HSF4Q9ULV5 492 aa18.02■□□□□ 0.48
COL9A3-213ENST00000489045 ERICH4A6NGS2 130 aa18.01■□□□□ 0.47
COL9A3-213ENST00000489045 CCL24O00175 119 aa18.01■□□□□ 0.47
COL9A3-213ENST00000489045 NBR2O15453 112 aa18.01■□□□□ 0.47
COL9A3-213ENST00000489045 TMEM50BP56557 158 aa18.01■□□□□ 0.47
COL9A3-213ENST00000489045 DEFB136Q30KP8 78 aa18.01■□□□□ 0.47
COL9A3-213ENST00000489045 RPL39P5Q59GN2 51 aa18.01■□□□□ 0.47
COL9A3-213ENST00000489045 FAM3DQ96BQ1 224 aa18.01■□□□□ 0.47
COL9A3-213ENST00000489045 ARHGAP5-AS1Q96IT6 56 aa18.01■□□□□ 0.47
COL9A3-213ENST00000489045 MCRIP2Q9BUT9 160 aaKnown RBP18.01■□□□□ 0.47
COL9A3-213ENST00000489045 ACOT13Q9NPJ3 140 aa18.01■□□□□ 0.47
COL9A3-213ENST00000489045 OR1A1Q9P1Q5 309 aa18.01■□□□□ 0.47
COL9A3-213ENST00000489045 V9GY05 133 aa18.01■□□□□ 0.47
COL9A3-213ENST00000489045 RAB29O14966 203 aa18■□□□□ 0.47
COL9A3-213ENST00000489045 HLA-DRB1P01911 266 aa18■□□□□ 0.47
COL9A3-213ENST00000489045 CDX1P47902 265 aaPredicted RBP18■□□□□ 0.47
COL9A3-213ENST00000489045 RAB25P57735 213 aa18■□□□□ 0.47
COL9A3-213ENST00000489045 FAM131AQ6UXB0 335 aa18■□□□□ 0.47
COL9A3-213ENST00000489045 ZNF367Q7RTV3 350 aa18■□□□□ 0.47
COL9A3-213ENST00000489045 PECRQ9BY49 303 aa18■□□□□ 0.47
COL9A3-213ENST00000489045 C12orf4Q9NQ89 552 aa18■□□□□ 0.47
COL9A3-213ENST00000489045 BLOC1S6Q9UL45 172 aa18■□□□□ 0.47
COL9A3-213ENST00000489045 MGAT4AQ9UM21 535 aa18■□□□□ 0.47
COL9A3-213ENST00000489045 WI2-2373I1.2A0A1W2PRP0 233 aa17.99■□□□□ 0.47
COL9A3-213ENST00000489045 ATP6V0E1O15342 81 aa17.99■□□□□ 0.47
COL9A3-213ENST00000489045 OR5H8P0DN80 308 aa17.99■□□□□ 0.47
COL9A3-213ENST00000489045 PSMB8P28062 276 aa17.99■□□□□ 0.47
COL9A3-213ENST00000489045 SSX1Q16384 188 aa17.99■□□□□ 0.47
COL9A3-213ENST00000489045 C5orf64Q2M2E5 130 aa17.99■□□□□ 0.47
COL9A3-213ENST00000489045 C2orf76Q3KRA6 126 aa17.99■□□□□ 0.47
COL9A3-213ENST00000489045 HES5Q5TA89 166 aa17.99■□□□□ 0.47
COL9A3-213ENST00000489045 NPBQ8NG41 125 aa17.99■□□□□ 0.47
COL9A3-213ENST00000489045 OR56B1Q8NGI3 324 aa17.99■□□□□ 0.47
COL9A3-213ENST00000489045 OR8U1Q8NH10 309 aa17.99■□□□□ 0.47
COL9A3-213ENST00000489045 ABHD14BQ96IU4 210 aa17.99■□□□□ 0.47
COL9A3-213ENST00000489045 OR51J1Q9H342 316 aa17.99■□□□□ 0.47
COL9A3-213ENST00000489045 Q9N2K0 584 aa17.99■□□□□ 0.47
COL9A3-213ENST00000489045 PARP11Q9NR21 331 aa17.99■□□□□ 0.47
COL9A3-213ENST00000489045 KIAA1456Q9P272 454 aa17.99■□□□□ 0.47
COL9A3-213ENST00000489045 IGHV7-81A0A0B4J1V7 117 aa17.98■□□□□ 0.47
COL9A3-213ENST00000489045 ITGB1BP1O14713 200 aa17.98■□□□□ 0.47
COL9A3-213ENST00000489045 HSPA12AO43301 675 aa17.98■□□□□ 0.47
COL9A3-213ENST00000489045 DENRO43583 198 aaKnown RBP17.98■□□□□ 0.47
COL9A3-213ENST00000489045 NDUFA3O95167 84 aa17.98■□□□□ 0.47
COL9A3-213ENST00000489045 SCTP09683 121 aa17.98■□□□□ 0.47
COL9A3-213ENST00000489045 CT45A6P0DMU7 189 aa17.98■□□□□ 0.47
COL9A3-213ENST00000489045 CT45A5P0DMU8 189 aa17.98■□□□□ 0.47
COL9A3-213ENST00000489045 CT45A7P0DMV0 189 aa17.98■□□□□ 0.47
COL9A3-213ENST00000489045 ZBTB25P24278 435 aa17.98■□□□□ 0.47
COL9A3-213ENST00000489045 PLA2G7Q13093 441 aa17.98■□□□□ 0.47
COL9A3-213ENST00000489045 KIR2DS1Q14954 304 aa17.98■□□□□ 0.47
COL9A3-213ENST00000489045 PLAC9Q5JTB6 97 aa17.98■□□□□ 0.47
COL9A3-213ENST00000489045 GLDNQ6ZMI3 551 aaPredicted RBP17.98■□□□□ 0.47
COL9A3-213ENST00000489045 CMSS1Q9BQ75 279 aaKnown RBP17.98■□□□□ 0.47
COL9A3-213ENST00000489045 AGMATQ9BSE5 352 aa17.98■□□□□ 0.47
COL9A3-213ENST00000489045 WSB1Q9Y6I7 421 aa17.98■□□□□ 0.47
COL9A3-213ENST00000489045 TMEM272A0A1B0GTI8 110 aa17.97■□□□□ 0.47
COL9A3-213ENST00000489045 OR5H14A6NHG9 310 aa17.97■□□□□ 0.47
COL9A3-213ENST00000489045 G3V318 75 aa17.97■□□□□ 0.47
COL9A3-213ENST00000489045 LDLRAD4O15165 306 aa17.97■□□□□ 0.47
COL9A3-213ENST00000489045 PPIFP30405 207 aaKnown RBP17.97■□□□□ 0.47
COL9A3-213ENST00000489045 CEACAM6P40199 344 aa17.97■□□□□ 0.47
COL9A3-213ENST00000489045 PSMD7P51665 324 aa17.97■□□□□ 0.47
COL9A3-213ENST00000489045 LIN54Q6MZP7 749 aa17.97■□□□□ 0.47
COL9A3-213ENST00000489045 C4orf3Q8WVX3 66 aa17.97■□□□□ 0.47
COL9A3-213ENST00000489045 EDARADDQ8WWZ3 215 aa17.97■□□□□ 0.47
COL9A3-213ENST00000489045 CHCHD6Q9BRQ6 235 aa17.97■□□□□ 0.47
COL9A3-213ENST00000489045 C11orf54Q9H0W9 315 aaPredicted RBP17.97■□□□□ 0.47
COL9A3-213ENST00000489045 RAB26Q9ULW5 256 aa17.97■□□□□ 0.47
COL9A3-213ENST00000489045 H0YJW9 148 aa17.96■□□□□ 0.47
COL9A3-213ENST00000489045 RANBP1P43487 201 aa17.96■□□□□ 0.47
COL9A3-213ENST00000489045 NDUFB11Q9NX14 153 aa17.96■□□□□ 0.47
COL9A3-213ENST00000489045 SHISA3A0PJX4 238 aa17.95■□□□□ 0.46
COL9A3-213ENST00000489045 PDCD5O14737 125 aa17.95■□□□□ 0.46
COL9A3-213ENST00000489045 OR10A3P58181 314 aa17.95■□□□□ 0.46
COL9A3-213ENST00000489045 NDPQ00604 133 aa17.95■□□□□ 0.46
COL9A3-213ENST00000489045 DEFB121Q5J5C9 76 aa17.95■□□□□ 0.46
COL9A3-213ENST00000489045 MYOZ3Q8TDC0 251 aa17.95■□□□□ 0.46
COL9A3-213ENST00000489045 KLK15Q9H2R5 256 aa17.95■□□□□ 0.46
COL9A3-213ENST00000489045 GHITMQ9H3K2 345 aa17.95■□□□□ 0.46
COL9A3-213ENST00000489045 FBXL15Q9H469 300 aa17.95■□□□□ 0.46
COL9A3-213ENST00000489045 RAB22AQ9UL26 194 aa17.95■□□□□ 0.46
COL9A3-213ENST00000489045 COL7A1Q02388 2944 aa17.95■□□□□ 0.46
COL9A3-213ENST00000489045 TRAV1-2A0A0B4J238 106 aa17.94■□□□□ 0.46
COL9A3-213ENST00000489045 TRAV41A0A0B4J266 112 aa17.94■□□□□ 0.46
COL9A3-213ENST00000489045 IGKV1-6A0A0C4DH72 117 aa17.94■□□□□ 0.46
COL9A3-213ENST00000489045 H7C2Y5 167 aa17.94■□□□□ 0.46
COL9A3-213ENST00000489045 RRHO14718 337 aa17.94■□□□□ 0.46
COL9A3-213ENST00000489045 MC5RP33032 325 aa17.94■□□□□ 0.46
COL9A3-213ENST00000489045 TMEM65Q6PI78 240 aa17.94■□□□□ 0.46
COL9A3-213ENST00000489045 CD200R1LQ6Q8B3 271 aa17.94■□□□□ 0.46
COL9A3-213ENST00000489045 OR5M8Q8NGP6 311 aa17.94■□□□□ 0.46
COL9A3-213ENST00000489045 RNF150Q9ULK6 438 aa17.94■□□□□ 0.46
COL9A3-213ENST00000489045 WASHC3Q9Y3C0 194 aa17.94■□□□□ 0.46
COL9A3-213ENST00000489045 TRDCB7Z8K6 153 aa17.93■□□□□ 0.46
COL9A3-213ENST00000489045 IGLV1-40P01703 118 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms