RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 PCNX1Q96RV3 2341 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 MT-ND4LP03901 98 aa10.67□□□□□ -0.7
CLIC4-202ENST00000488683 SSTR5P35346 364 aa10.67□□□□□ -0.7
CLIC4-202ENST00000488683 C4orf17Q53FE4 359 aa10.67□□□□□ -0.7
CLIC4-202ENST00000488683 UTF1Q5T230 341 aa10.67□□□□□ -0.7
CLIC4-202ENST00000488683 Q8WTZ3 238 aa10.67□□□□□ -0.7
CLIC4-202ENST00000488683 OR2D2Q9H210 308 aa10.67□□□□□ -0.7
CLIC4-202ENST00000488683 LRBAP50851 2863 aa10.67□□□□□ -0.7
CLIC4-202ENST00000488683 MLNRO43193 412 aa10.67□□□□□ -0.7
CLIC4-202ENST00000488683 MMP9P14780 707 aa10.67□□□□□ -0.7
CLIC4-202ENST00000488683 CD46P15529 392 aa10.67□□□□□ -0.7
CLIC4-202ENST00000488683 AGAP20933 346 aa10.67□□□□□ -0.7
CLIC4-202ENST00000488683 TBC1D28Q2M2D7 210 aa10.67□□□□□ -0.7
CLIC4-202ENST00000488683 KDF1Q8NAX2 398 aaPredicted RBP10.67□□□□□ -0.7
CLIC4-202ENST00000488683 CLDND2Q8NHS1 167 aa10.67□□□□□ -0.7
CLIC4-202ENST00000488683 SYNGR2O43760 224 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 GFI1BQ5VTD9 330 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 STX12Q86Y82 276 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 FER1L6-AS2Q96M78 137 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 RTL8AQ9BWD3 113 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 TUBA4BQ9H853 241 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 NIT2Q9NQR4 276 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 KIAA1456Q9P272 454 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 A0A1B0GU03 582 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 LRP5LA4QPB2 252 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 LINC00587B1AMM8 73 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 NPIPB11E5RHQ5 1161 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 SOX15O60248 233 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 CLN5O75503 358 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 IGKV1D-33P01593 117 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 IGKV1-33P01594 117 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 CEACAM1P13688 526 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 TAS2R30P59541 319 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 EDDM3AQ14507 147 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 RHEBQ15382 184 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 SPRNQ5BIV9 151 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 LILRB2Q8N423 598 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 FGFRL1Q8N441 504 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 NANOS1Q8WY41 292 aaKnown RBP10.66□□□□□ -0.7
CLIC4-202ENST00000488683 GNPNAT1Q96EK6 184 aaPredicted RBP10.66□□□□□ -0.7
CLIC4-202ENST00000488683 CDH20Q9HBT6 801 aa10.66□□□□□ -0.7
CLIC4-202ENST00000488683 GALR2O43603 387 aaPredicted RBP10.65□□□□□ -0.7
CLIC4-202ENST00000488683 CLDN1O95832 211 aa10.65□□□□□ -0.7
CLIC4-202ENST00000488683 PGA5P0DJD9 388 aa10.65□□□□□ -0.7
CLIC4-202ENST00000488683 GABRA2P47869 451 aa10.65□□□□□ -0.7
CLIC4-202ENST00000488683 GLIPR1P48060 266 aa10.65□□□□□ -0.7
CLIC4-202ENST00000488683 UBE2NP61088 152 aaKnown RBP10.65□□□□□ -0.7
CLIC4-202ENST00000488683 B2MP61769 119 aa10.65□□□□□ -0.7
CLIC4-202ENST00000488683 OR8G1Q15617 311 aa10.65□□□□□ -0.7
CLIC4-202ENST00000488683 RNF212Q495C1 297 aa10.65□□□□□ -0.7
CLIC4-202ENST00000488683 FDCSPQ8NFU4 85 aa10.65□□□□□ -0.7
CLIC4-202ENST00000488683 OR4C12Q96R67 309 aa10.65□□□□□ -0.7
CLIC4-202ENST00000488683 ZDHHC11Q9H8X9 412 aa10.65□□□□□ -0.7
CLIC4-202ENST00000488683 TREM2Q9NZC2 230 aa10.65□□□□□ -0.7
CLIC4-202ENST00000488683 PLCE1Q9P212 2302 aa10.65□□□□□ -0.7
CLIC4-202ENST00000488683 OR5H1A6NKK0 313 aa10.65□□□□□ -0.7
CLIC4-202ENST00000488683 C17orf98A8MV24 154 aa10.65□□□□□ -0.7
CLIC4-202ENST00000488683 C12orf77C9JDV5 145 aa10.65□□□□□ -0.7
CLIC4-202ENST00000488683 M0R296 226 aa10.65□□□□□ -0.7
CLIC4-202ENST00000488683 PTBP3O95758 552 aaKnown RBP10.65□□□□□ -0.7
CLIC4-202ENST00000488683 NDUFA6P56556 154 aa10.65□□□□□ -0.7
CLIC4-202ENST00000488683 RAB2AP61019 212 aa10.65□□□□□ -0.7
CLIC4-202ENST00000488683 ZNF674Q2M3X9 581 aa10.65□□□□□ -0.7
CLIC4-202ENST00000488683 NECAP1Q8NC96 275 aa10.65□□□□□ -0.7
CLIC4-202ENST00000488683 KLF14Q8TD94 323 aaPredicted RBP10.65□□□□□ -0.7
CLIC4-202ENST00000488683 YPEL4Q96NS1 127 aa10.65□□□□□ -0.7
CLIC4-202ENST00000488683 POLEQ07864 2286 aa10.65□□□□□ -0.71
CLIC4-202ENST00000488683 OTOGLQ3ZCN5 2332 aa10.65□□□□□ -0.71
CLIC4-202ENST00000488683 S1PR2O95136 353 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 HAND1O96004 215 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 S100GP29377 79 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 BRWD1-AS2P59051 145 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 SPNS3Q6ZMD2 512 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 SSX9Q7RTT3 188 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 VKORC1L1Q8N0U8 176 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 ZNF561Q8N587 486 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 ZNF525Q8N782 197 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 OR8G5Q8NG78 346 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 MUCL1Q96DR8 90 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 MBNL3Q9NUK0 354 aaKnown RBP10.64□□□□□ -0.71
CLIC4-202ENST00000488683 HCFC1P51610 2035 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 SPAARA0A1B0GVQ0 90 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 ST8SIA5O15466 376 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 CYB5BO43169 146 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 RBMXL2O75526 392 aaKnown RBP10.64□□□□□ -0.71
CLIC4-202ENST00000488683 IFNA5P01569 189 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 IFNA4P05014 189 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 SLC25A6P12236 298 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 ZNF146Q15072 292 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 ZNF787Q6DD87 383 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 FIP1L1Q6UN15 594 aaKnown RBP10.64□□□□□ -0.71
CLIC4-202ENST00000488683 OR5T1Q8NG75 326 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 LEAP2Q969E1 77 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 RBKSQ9H477 322 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 SLC25A22Q9H936 323 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 ANKRD11Q6UB99 2663 aaPredicted RBP10.64□□□□□ -0.71
CLIC4-202ENST00000488683 IGHV3OR15-7A0A075B7D8 119 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 MDH2P40926 338 aaKnown RBP10.64□□□□□ -0.71
CLIC4-202ENST00000488683 ELOBQ15370 118 aa10.64□□□□□ -0.71
CLIC4-202ENST00000488683 FAM201AQ5SY85 155 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms