RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 MMDQ15546 238 aa16.12■□□□□ 0.17
HDAC4-209ENST00000487617 NR2C2APQ86WQ0 139 aa16.12■□□□□ 0.17
HDAC4-209ENST00000487617 FAM71E2Q8N5Q1 922 aa16.12■□□□□ 0.17
HDAC4-209ENST00000487617 OR10R2Q8NGX6 335 aa16.12■□□□□ 0.17
HDAC4-209ENST00000487617 SSR3Q9UNL2 185 aa16.12■□□□□ 0.17
HDAC4-209ENST00000487617 KCNK7Q9Y2U2 307 aa16.12■□□□□ 0.17
HDAC4-209ENST00000487617 CMYA5Q8N3K9 4069 aa16.12■□□□□ 0.17
HDAC4-209ENST00000487617 TRDCB7Z8K6 153 aa16.11■□□□□ 0.17
HDAC4-209ENST00000487617 SLC2A2P11168 524 aaPredicted RBP16.11■□□□□ 0.17
HDAC4-209ENST00000487617 CD33P20138 364 aa16.11■□□□□ 0.17
HDAC4-209ENST00000487617 SOX6P35712 828 aa16.11■□□□□ 0.17
HDAC4-209ENST00000487617 ACTBP60709 375 aa16.11■□□□□ 0.17
HDAC4-209ENST00000487617 BEAN1Q3B7T3 259 aa16.11■□□□□ 0.17
HDAC4-209ENST00000487617 RPL39P5Q59GN2 51 aa16.11■□□□□ 0.17
HDAC4-209ENST00000487617 FAM71F2Q6NXP2 309 aa16.11■□□□□ 0.17
HDAC4-209ENST00000487617 COMMD1Q8N668 190 aa16.11■□□□□ 0.17
HDAC4-209ENST00000487617 EDARADDQ8WWZ3 215 aa16.11■□□□□ 0.17
HDAC4-209ENST00000487617 ABHD14BQ96IU4 210 aa16.11■□□□□ 0.17
HDAC4-209ENST00000487617 A0A075B6Q4 140 aa16.1■□□□□ 0.17
HDAC4-209ENST00000487617 METTL21EPA6NDL7 271 aa16.1■□□□□ 0.17
HDAC4-209ENST00000487617 NOTOA8MTQ0 251 aa16.1■□□□□ 0.17
HDAC4-209ENST00000487617 ITGB1BP1O14713 200 aa16.1■□□□□ 0.17
HDAC4-209ENST00000487617 GNB3P16520 340 aa16.1■□□□□ 0.17
HDAC4-209ENST00000487617 RPL23AP62750 156 aaKnown RBP16.1■□□□□ 0.17
HDAC4-209ENST00000487617 OXLD1Q5BKU9 147 aa16.1■□□□□ 0.17
HDAC4-209ENST00000487617 PHF21AQ96BD5 680 aa16.1■□□□□ 0.17
HDAC4-209ENST00000487617 RITA1Q96K30 269 aa16.1■□□□□ 0.17
HDAC4-209ENST00000487617 HSPB9Q9BQS6 159 aa16.1■□□□□ 0.17
HDAC4-209ENST00000487617 ZNF251Q9BRH9 671 aa16.1■□□□□ 0.17
HDAC4-209ENST00000487617 GON7Q9BXV9 100 aa16.1■□□□□ 0.17
HDAC4-209ENST00000487617 C11orf54Q9H0W9 315 aaPredicted RBP16.1■□□□□ 0.17
HDAC4-209ENST00000487617 IGKV1-6A0A0C4DH72 117 aa16.09■□□□□ 0.17
HDAC4-209ENST00000487617 RAB27BO00194 218 aa16.09■□□□□ 0.17
HDAC4-209ENST00000487617 RRP9O43818 475 aaKnown RBP16.09■□□□□ 0.17
HDAC4-209ENST00000487617 HIST1H1DP16402 221 aaKnown RBP16.09■□□□□ 0.17
HDAC4-209ENST00000487617 TPRA1Q86W33 373 aa16.09■□□□□ 0.17
HDAC4-209ENST00000487617 PTX4Q96A99 478 aa16.09■□□□□ 0.17
HDAC4-209ENST00000487617 AGMATQ9BSE5 352 aa16.09■□□□□ 0.17
HDAC4-209ENST00000487617 ATG5Q9H1Y0 275 aa16.09■□□□□ 0.17
HDAC4-209ENST00000487617 OR51E2Q9H255 320 aa16.09■□□□□ 0.17
HDAC4-209ENST00000487617 GHITMQ9H3K2 345 aa16.09■□□□□ 0.17
HDAC4-209ENST00000487617 ZNF107Q9UII5 783 aaPredicted RBP16.09■□□□□ 0.17
HDAC4-209ENST00000487617 MFNGO00587 321 aa16.08■□□□□ 0.16
HDAC4-209ENST00000487617 FABP7O15540 132 aa16.08■□□□□ 0.16
HDAC4-209ENST00000487617 PLXNB1O43157 2135 aa16.08■□□□□ 0.16
HDAC4-209ENST00000487617 FCGR3AP08637 254 aa16.08■□□□□ 0.16
HDAC4-209ENST00000487617 CT45A6P0DMU7 189 aa16.08■□□□□ 0.16
HDAC4-209ENST00000487617 CT45A5P0DMU8 189 aa16.08■□□□□ 0.16
HDAC4-209ENST00000487617 CT45A7P0DMV0 189 aa16.08■□□□□ 0.16
HDAC4-209ENST00000487617 CNTFRP26992 372 aa16.08■□□□□ 0.16
HDAC4-209ENST00000487617 NEDD8Q15843 81 aa16.08■□□□□ 0.16
HDAC4-209ENST00000487617 PNLIPRP3Q17RR3 467 aa16.08■□□□□ 0.16
HDAC4-209ENST00000487617 KCTD21Q4G0X4 260 aa16.08■□□□□ 0.16
HDAC4-209ENST00000487617 KPRPQ5T749 579 aaPredicted RBP16.08■□□□□ 0.16
HDAC4-209ENST00000487617 TEX38Q6PEX7 206 aa16.08■□□□□ 0.16
HDAC4-209ENST00000487617 FAM131AQ6UXB0 335 aa16.08■□□□□ 0.16
HDAC4-209ENST00000487617 WFDC9Q8NEX5 89 aa16.08■□□□□ 0.16
HDAC4-209ENST00000487617 OR4A4PQ8NGN8 299 aa16.08■□□□□ 0.16
HDAC4-209ENST00000487617 ZFP57Q9NU63 452 aa16.08■□□□□ 0.16
HDAC4-209ENST00000487617 RNF150Q9ULK6 438 aa16.08■□□□□ 0.16
HDAC4-209ENST00000487617 NUDT19A8MXV4 375 aa16.07■□□□□ 0.16
HDAC4-209ENST00000487617 NBR2O15453 112 aa16.07■□□□□ 0.16
HDAC4-209ENST00000487617 ARFRP1Q13795 201 aa16.07■□□□□ 0.16
HDAC4-209ENST00000487617 KIR2DS1Q14954 304 aa16.07■□□□□ 0.16
HDAC4-209ENST00000487617 GLDNQ6ZMI3 551 aaPredicted RBP16.07■□□□□ 0.16
HDAC4-209ENST00000487617 KCTD7Q96MP8 289 aa16.07■□□□□ 0.16
HDAC4-209ENST00000487617 CHCHD6Q9BRQ6 235 aa16.07■□□□□ 0.16
HDAC4-209ENST00000487617 RDH8Q9NYR8 311 aa16.07■□□□□ 0.16
HDAC4-209ENST00000487617 KIAA1456Q9P272 454 aa16.07■□□□□ 0.16
HDAC4-209ENST00000487617 DAPK2Q9UIK4 370 aa16.07■□□□□ 0.16
HDAC4-209ENST00000487617 ZNF221Q9UK13 617 aa16.07■□□□□ 0.16
HDAC4-209ENST00000487617 OR5H14A6NHG9 310 aa16.06■□□□□ 0.16
HDAC4-209ENST00000487617 VDAC1P21796 283 aa16.06■□□□□ 0.16
HDAC4-209ENST00000487617 TALDO1P37837 337 aa16.06■□□□□ 0.16
HDAC4-209ENST00000487617 SERPINB10P48595 397 aa16.06■□□□□ 0.16
HDAC4-209ENST00000487617 C18orf65Q6ZTR6 163 aa16.06■□□□□ 0.16
HDAC4-209ENST00000487617 MAFIPQ8WZ33 124 aa16.06■□□□□ 0.16
HDAC4-209ENST00000487617 ZNF230Q9UIE0 474 aaPredicted RBP16.06■□□□□ 0.16
HDAC4-209ENST00000487617 NOTCH3Q9UM47 2321 aa16.05■□□□□ 0.16
HDAC4-209ENST00000487617 LOC100506127A0A0U1RQW1 187 aa16.05■□□□□ 0.16
HDAC4-209ENST00000487617 H0YJW9 148 aa16.05■□□□□ 0.16
HDAC4-209ENST00000487617 H7C2Y5 167 aa16.05■□□□□ 0.16
HDAC4-209ENST00000487617 BET1O15155 118 aa16.05■□□□□ 0.16
HDAC4-209ENST00000487617 PRB2P02812 416 aaPredicted RBP16.05■□□□□ 0.16
HDAC4-209ENST00000487617 GSTT2P0CG29 244 aa16.05■□□□□ 0.16
HDAC4-209ENST00000487617 GSTT2BP0CG30 244 aa16.05■□□□□ 0.16
HDAC4-209ENST00000487617 IGLL1P15814 213 aa16.05■□□□□ 0.16
HDAC4-209ENST00000487617 CD36P16671 472 aa16.05■□□□□ 0.16
HDAC4-209ENST00000487617 MC5RP33032 325 aa16.05■□□□□ 0.16
HDAC4-209ENST00000487617 SDC2P34741 201 aa16.05■□□□□ 0.16
HDAC4-209ENST00000487617 C5orf64Q2M2E5 130 aa16.05■□□□□ 0.16
HDAC4-209ENST00000487617 IGSF11Q5DX21 431 aa16.05■□□□□ 0.16
HDAC4-209ENST00000487617 CXorf66Q5JRM2 361 aaPredicted RBP16.05■□□□□ 0.16
HDAC4-209ENST00000487617 SFXN4Q6P4A7 337 aa16.05■□□□□ 0.16
HDAC4-209ENST00000487617 KLHL30-AS1Q8NEE0 82 aa16.05■□□□□ 0.16
HDAC4-209ENST00000487617 NPBQ8NG41 125 aa16.05■□□□□ 0.16
HDAC4-209ENST00000487617 WASHC3Q9Y3C0 194 aa16.05■□□□□ 0.16
HDAC4-209ENST00000487617 HLA-DRB1P01911 266 aa16.04■□□□□ 0.16
HDAC4-209ENST00000487617 IGF1P05019 195 aa16.04■□□□□ 0.16
HDAC4-209ENST00000487617 RPLP1P05386 114 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms